Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_F13
         (427 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   0.93 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   6.6  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   6.6  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    20   8.7  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 0.93
 Identities = 10/20 (50%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
 Frame = +2

Query: 62  IYMTF--KVYFNNLDKRVWI 115
           +YM F  ++YF+NLDK  +I
Sbjct: 319 LYMAFMDRLYFSNLDKDAFI 338


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 14  CNKLLFKTSHLIYKICIYMTF 76
           C  ++F T HL++ +CIY  F
Sbjct: 151 CAFIIF-TVHLLFLLCIYHFF 170



 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 14  CNKLLFKTSHLIYKICIY 67
           C   +  T HL++ +CIY
Sbjct: 269 CCAFIIFTMHLLFLLCIY 286



 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 35  TSHLIYKICIY 67
           T HL++ +CIY
Sbjct: 124 TVHLLFLLCIY 134



 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/32 (21%), Positives = 17/32 (53%)
 Frame = +1

Query: 169 CCVVLTLCLDIYYT*YSTKNDHC*IVLLRHYF 264
           C +++ LC+  +Y  +     H  +++  +YF
Sbjct: 230 CVLIILLCIYYFYYAFILFTVHLLLLVCIYYF 261


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 134 YIIISFLSKPFYLNY*NTL*KSYKYIFYKL 45
           ++ +SF+   F L Y   L +SY  I + L
Sbjct: 125 HVDVSFIKAGFRLEYKQLLKRSYLIISFVL 154


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 134 YIIISFLSKPFYLNY*NTL*KSYKYIFYKL 45
           ++ +SF+   F L Y   L +SY  I + L
Sbjct: 125 HVDVSFIKAGFRLEYKQLLKRSYLIISFVL 154


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 178 VLTLCLDIYY 207
           VLTLC  +YY
Sbjct: 112 VLTLCYAVYY 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,478
Number of Sequences: 336
Number of extensions: 2003
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)