Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_F13
         (427 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113630-1|AAM29635.1|  117|Drosophila melanogaster RH71704p pro...    29   2.0  
AY070956-1|AAL48578.1|  117|Drosophila melanogaster RE05591p pro...    29   2.0  
AE013599-2890|AAF57557.1|  117|Drosophila melanogaster CG9291-PB...    29   2.0  
AE013599-2889|AAF57558.3|  117|Drosophila melanogaster CG9291-PA...    29   2.0  
AB007693-1|BAA24287.1|   98|Drosophila melanogaster Elongin C pr...    29   2.0  
BT003805-1|AAO41488.1|  489|Drosophila melanogaster AT15560p pro...    29   2.6  
AE014296-501|AAS64949.1|  488|Drosophila melanogaster CG33233-PA...    29   2.6  

>AY113630-1|AAM29635.1|  117|Drosophila melanogaster RH71704p
           protein.
          Length = 117

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 38  SHLIYKICIYMTFKVYFNN 94
           SH++ K+C+Y T+KV + N
Sbjct: 72  SHVLQKVCMYFTYKVRYTN 90


>AY070956-1|AAL48578.1|  117|Drosophila melanogaster RE05591p
           protein.
          Length = 117

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 38  SHLIYKICIYMTFKVYFNN 94
           SH++ K+C+Y T+KV + N
Sbjct: 72  SHVLQKVCMYFTYKVRYTN 90


>AE013599-2890|AAF57557.1|  117|Drosophila melanogaster CG9291-PB,
           isoform B protein.
          Length = 117

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 38  SHLIYKICIYMTFKVYFNN 94
           SH++ K+C+Y T+KV + N
Sbjct: 72  SHVLQKVCMYFTYKVRYTN 90


>AE013599-2889|AAF57558.3|  117|Drosophila melanogaster CG9291-PA,
           isoform A protein.
          Length = 117

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 38  SHLIYKICIYMTFKVYFNN 94
           SH++ K+C+Y T+KV + N
Sbjct: 72  SHVLQKVCMYFTYKVRYTN 90


>AB007693-1|BAA24287.1|   98|Drosophila melanogaster Elongin C
           protein.
          Length = 98

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 38  SHLIYKICIYMTFKVYFNN 94
           SH++ K+C+Y T+KV + N
Sbjct: 53  SHVLQKVCMYFTYKVRYTN 71


>BT003805-1|AAO41488.1|  489|Drosophila melanogaster AT15560p
           protein.
          Length = 489

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 20  KLLFKTSHLI-YKICIYMTFKVYFNNLDKRVW 112
           KLLF   H+  + IC+++ F ++F ++   +W
Sbjct: 267 KLLFSKPHVFKFFICLFLIFGIFFTSIGLGIW 298


>AE014296-501|AAS64949.1|  488|Drosophila melanogaster CG33233-PA,
           isoform A protein.
          Length = 488

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 20  KLLFKTSHLI-YKICIYMTFKVYFNNLDKRVW 112
           KLLF   H+  + IC+++ F ++F ++   +W
Sbjct: 267 KLLFSKPHVFKFFICLFLIFGIFFTSIGLGIW 298


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,946,550
Number of Sequences: 53049
Number of extensions: 286826
Number of successful extensions: 422
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)