Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_F12
(498 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 25 0.44
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 1.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.3
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 3.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 3.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 3.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 3.1
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 22 3.1
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 7.1
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 21 9.4
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 9.4
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 9.4
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 25.0 bits (52), Expect = 0.44
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -1
Query: 468 SLNRSQHDAALPSTTPRQERKSST 397
++N+ Q + TTP++ERK++T
Sbjct: 776 NVNKEQSPNSTKETTPKKERKTAT 799
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 1.8
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -2
Query: 347 EPWXXXXXXXXXXXXDPNGLRRRASPEWSATSKVT 243
EP GL RASP +S TS T
Sbjct: 901 EPTSAAFAQGFATAASSPGLLERASPAFSGTSSPT 935
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.6 bits (46), Expect = 2.3
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 171 EASLAESGKDMLTVEPRESGGSKQSDFTSRAPLR*GATSKP 293
EA + +SGK + V G S ++ T APL GA +P
Sbjct: 276 EARVEDSGKYLCIVNNSVGGESVETVLTVTAPL--GAEIEP 314
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 3.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 102 ALGRAAGGAKLPSAGLCLNASKAEASL 182
ALGR AGG S+ L L+ + +SL
Sbjct: 5 ALGRCAGGGGRLSSVLSLSLTSLASSL 31
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.2 bits (45), Expect = 3.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 102 ALGRAAGGAKLPSAGLCLNASKAEASL 182
ALGR AGG S+ L L+ + +SL
Sbjct: 5 ALGRCAGGGGRLSSVLSLSLTSLASSL 31
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.2 bits (45), Expect = 3.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 102 ALGRAAGGAKLPSAGLCLNASKAEASL 182
ALGR AGG S+ L L+ + +SL
Sbjct: 5 ALGRCAGGGGRLSSVLSLSLTSLASSL 31
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.2 bits (45), Expect = 3.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 102 ALGRAAGGAKLPSAGLCLNASKAEASL 182
ALGR AGG S+ L L+ + +SL
Sbjct: 5 ALGRCAGGGGRLSSVLSLSLTSLASSL 31
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 22.2 bits (45), Expect = 3.1
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 128 RTTGRSAECMNQMSETAVPLVLSS 57
+ G+ +C N MSE V ++L +
Sbjct: 170 KENGKEFDCHNYMSELTVDILLET 193
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.0 bits (42), Expect = 7.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 466 SQQIAARRCSTEHNTPPGT 410
S Q + +R STE P GT
Sbjct: 534 SGQTSVQRASTEFGIPTGT 552
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 20.6 bits (41), Expect = 9.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 153 GIIPRMVASHHRPLGRVHEPNVR 85
G I ++AS HR L NVR
Sbjct: 219 GRISCVIASRHRNLEATESENVR 241
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 20.6 bits (41), Expect = 9.4
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 81 SFGHLVHALGRAAGGAKLPSAG 146
S LV A+ AGG PSAG
Sbjct: 393 SMSALVSAVRSPAGGQLPPSAG 414
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -2
Query: 416 RNGSRLQTIPSPDIEL 369
RNG+ L+T+ P+I +
Sbjct: 346 RNGADLETLNEPEIRV 361
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,154
Number of Sequences: 438
Number of extensions: 3046
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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