Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_F11
         (448 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    28   0.13 
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   4.9  
AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative apyrase/n...    23   4.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   4.9  
AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5' nucleo...    23   4.9  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   6.5  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    22   8.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   8.6  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 28.3 bits (60), Expect = 0.13
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 307 GDSGGIGQHADGALHLGEITDGHH 378
           G  GG G    GALHLG+  + HH
Sbjct: 100 GSGGGSGGIGSGALHLGQNPNLHH 123


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 234 GEGMEEGEFSEAREDLAALEKDYEE 160
           G+G  E E   A EDL   +K  EE
Sbjct: 781 GKGHRERELKSAEEDLKRSKKKSEE 805


>AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 566

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 255 AFVHWYVGEGMEEGEFSEA 199
           AFV +YVG G  E E++ A
Sbjct: 387 AFVDYYVGRGEAEHEWTYA 405


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 232  TDVPVHEGALTVHQVELVVETSPGLGDSGGIGQHADGA 345
            T + +H+       V+++V  S G G  GG G   DG+
Sbjct: 1692 TTIIIHDSE-DEKDVDIIVSGSGGGGGGGGGGGEEDGS 1728


>AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 566

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 255 AFVHWYVGEGMEEGEFSEA 199
           AFV +YVG G  E E++ A
Sbjct: 387 AFVDYYVGRGEAEHEWTYA 405


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +1

Query: 280 LVVETSPGLGDSGGIGQHADGALHLGEITDGHHGRG 387
           +    SPG G  GG G    G++  G I     G G
Sbjct: 644 VAASVSPGSGGGGGGGGGGGGSVGSGGIGSSSLGGG 679


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +1

Query: 298  PGLGDSGGIGQHADGALHLGEITDGHHGRGLVVDTDLETGLTS 426
            P +GD     +H D   HL ++  GH   G   D     G TS
Sbjct: 962  PSVGDWQS-RKHGDMTFHLAQVLSGH---GFFRDYLCHNGFTS 1000


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 97   IFIGLVLFGSLTLSLGGVHADF 162
            +FIG +   SL  ++GGVH  F
Sbjct: 2796 LFIGSLTGASLFNAVGGVHKAF 2817


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 346,563
Number of Sequences: 2352
Number of extensions: 5914
Number of successful extensions: 63
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37843779
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)