Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_F11
(448 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 200 3e-52
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 200 3e-52
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 200 3e-52
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 200 3e-52
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 198 1e-51
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 198 2e-51
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 196 5e-51
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 196 5e-51
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 196 5e-51
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 196 5e-51
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 194 2e-50
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 194 2e-50
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 193 6e-50
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 192 1e-49
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 192 1e-49
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 177 4e-45
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 130 6e-31
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 65 3e-11
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 63 8e-11
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 63 8e-11
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 63 1e-10
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 63 1e-10
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 63 1e-10
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 44 4e-05
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 44 4e-05
Z82059-12|CAB04880.1| 622|Caenorhabditis elegans Hypothetical p... 29 2.0
AL032665-2|CAA21772.1| 622|Caenorhabditis elegans Hypothetical ... 29 2.0
U41556-9|AAK39192.1| 692|Caenorhabditis elegans Potassium chann... 28 3.6
U41556-8|AAM51518.1| 740|Caenorhabditis elegans Potassium chann... 28 3.6
AY572974-1|AAT77227.1| 692|Caenorhabditis elegans KQT-1 potassi... 28 3.6
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 27 4.7
U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine rec... 27 4.7
AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical ... 27 4.7
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 27 4.7
Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical pr... 27 6.2
U41270-2|AAA82440.1| 298|Caenorhabditis elegans Cell-death-rela... 27 8.2
AY303578-1|AAP57300.1| 298|Caenorhabditis elegans cell death-re... 27 8.2
AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical... 27 8.2
AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical... 27 8.2
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 200 bits (489), Expect = 3e-52
Identities = 93/100 (93%), Positives = 95/100 (95%)
Frame = -2
Query: 447 RTIQFVD*CQTGFKVGINYQPPTVVPVGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 268
R+IQFVD C TGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAWARLDHKFDLM
Sbjct: 339 RSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLM 398
Query: 267 YGKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 148
Y KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+D
Sbjct: 399 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVD 438
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 200 bits (489), Expect = 3e-52
Identities = 93/100 (93%), Positives = 95/100 (95%)
Frame = -2
Query: 447 RTIQFVD*CQTGFKVGINYQPPTVVPVGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 268
R+IQFVD C TGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAWARLDHKFDLM
Sbjct: 338 RSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLM 397
Query: 267 YGKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 148
Y KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+D
Sbjct: 398 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVD 437
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 200 bits (489), Expect = 3e-52
Identities = 93/100 (93%), Positives = 95/100 (95%)
Frame = -2
Query: 447 RTIQFVD*CQTGFKVGINYQPPTVVPVGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 268
R+IQFVD C TGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAWARLDHKFDLM
Sbjct: 339 RSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLM 398
Query: 267 YGKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 148
Y KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+D
Sbjct: 399 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVD 438
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 200 bits (489), Expect = 3e-52
Identities = 93/100 (93%), Positives = 95/100 (95%)
Frame = -2
Query: 447 RTIQFVD*CQTGFKVGINYQPPTVVPVGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 268
R+IQFVD C TGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAWARLDHKFDLM
Sbjct: 339 RSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLM 398
Query: 267 YGKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 148
Y KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+D
Sbjct: 399 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVD 438
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 198 bits (484), Expect = 1e-51
Identities = 91/100 (91%), Positives = 95/100 (95%)
Frame = -2
Query: 447 RTIQFVD*CQTGFKVGINYQPPTVVPVGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 268
R+IQFVD C TGFKVGINYQPPTVVP DL+K+QRAVCMLSNTTAIAEAWARLDHKFDLM
Sbjct: 344 RSIQFVDWCPTGFKVGINYQPPTVVPGADLSKLQRAVCMLSNTTAIAEAWARLDHKFDLM 403
Query: 267 YGKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 148
Y KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+D
Sbjct: 404 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLD 443
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 198 bits (482), Expect = 2e-51
Identities = 90/100 (90%), Positives = 94/100 (94%)
Frame = -2
Query: 447 RTIQFVD*CQTGFKVGINYQPPTVVPVGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 268
R IQFVD C TGFKVGINYQPPTVVP GD+AK+QRAVCMLSNTTAI EAWARLDHKFDLM
Sbjct: 339 RAIQFVDWCPTGFKVGINYQPPTVVPGGDMAKLQRAVCMLSNTTAIQEAWARLDHKFDLM 398
Query: 267 YGKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 148
Y KRAFVHWYVGEGMEEGEFSEARED+AALEKDYEEVG+D
Sbjct: 399 YAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVD 438
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 196 bits (479), Expect = 5e-51
Identities = 91/100 (91%), Positives = 94/100 (94%)
Frame = -2
Query: 447 RTIQFVD*CQTGFKVGINYQPPTVVPVGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 268
RTIQFVD C TGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLM
Sbjct: 337 RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLM 396
Query: 267 YGKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 148
Y KRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG D
Sbjct: 397 YAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGAD 436
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 196 bits (479), Expect = 5e-51
Identities = 91/100 (91%), Positives = 94/100 (94%)
Frame = -2
Query: 447 RTIQFVD*CQTGFKVGINYQPPTVVPVGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 268
RTIQFVD C TGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLM
Sbjct: 337 RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLM 396
Query: 267 YGKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 148
Y KRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG D
Sbjct: 397 YAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGAD 436
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 196 bits (479), Expect = 5e-51
Identities = 91/100 (91%), Positives = 94/100 (94%)
Frame = -2
Query: 447 RTIQFVD*CQTGFKVGINYQPPTVVPVGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 268
RTIQFVD C TGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLM
Sbjct: 337 RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLM 396
Query: 267 YGKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 148
Y KRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG D
Sbjct: 397 YAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGAD 436
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 196 bits (479), Expect = 5e-51
Identities = 91/100 (91%), Positives = 94/100 (94%)
Frame = -2
Query: 447 RTIQFVD*CQTGFKVGINYQPPTVVPVGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 268
RTIQFVD C TGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLM
Sbjct: 337 RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLM 396
Query: 267 YGKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 148
Y KRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG D
Sbjct: 397 YAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGAD 436
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 194 bits (474), Expect = 2e-50
Identities = 89/100 (89%), Positives = 94/100 (94%)
Frame = -2
Query: 447 RTIQFVD*CQTGFKVGINYQPPTVVPVGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 268
R++QFVD C TGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLM
Sbjct: 337 RSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLM 396
Query: 267 YGKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 148
Y KRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG D
Sbjct: 397 YAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGAD 436
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 194 bits (474), Expect = 2e-50
Identities = 89/100 (89%), Positives = 94/100 (94%)
Frame = -2
Query: 447 RTIQFVD*CQTGFKVGINYQPPTVVPVGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 268
R++QFVD C TGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLM
Sbjct: 337 RSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLM 396
Query: 267 YGKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 148
Y KRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG D
Sbjct: 397 YAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGAD 436
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 193 bits (470), Expect = 6e-50
Identities = 87/100 (87%), Positives = 93/100 (93%)
Frame = -2
Query: 447 RTIQFVD*CQTGFKVGINYQPPTVVPVGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 268
R++QFVD C TGFKVG+NYQPPTV+P GD+AKV RAVCMLSNTTAIAEAW RLD+KFDLM
Sbjct: 334 RSVQFVDWCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLSNTTAIAEAWQRLDYKFDLM 393
Query: 267 YGKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 148
Y KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG D
Sbjct: 394 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAD 433
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 192 bits (467), Expect = 1e-49
Identities = 86/100 (86%), Positives = 92/100 (92%)
Frame = -2
Query: 447 RTIQFVD*CQTGFKVGINYQPPTVVPVGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 268
RT+QFV+ C TGFKVGINYQPPTVVP GDL K R+VCM+SNTTAIAEAWARLDHKFDLM
Sbjct: 345 RTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLM 404
Query: 267 YGKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 148
Y KRAFVHWYVGEGMEEGEFSEARED+AALEKDYEE+G D
Sbjct: 405 YAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGED 444
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 192 bits (467), Expect = 1e-49
Identities = 86/100 (86%), Positives = 92/100 (92%)
Frame = -2
Query: 447 RTIQFVD*CQTGFKVGINYQPPTVVPVGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 268
RT+QFV+ C TGFKVGINYQPPTVVP GDL K R+VCM+SNTTAIAEAWARLDHKFDLM
Sbjct: 317 RTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLM 376
Query: 267 YGKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 148
Y KRAFVHWYVGEGMEEGEFSEARED+AALEKDYEE+G D
Sbjct: 377 YAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGED 416
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 177 bits (430), Expect = 4e-45
Identities = 83/100 (83%), Positives = 85/100 (85%)
Frame = -2
Query: 447 RTIQFVD*CQTGFKVGINYQPPTVVPVGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 268
R I FVD C TGFKVGINYQ P V GDLAKV RAVCMLSNTTAIAEAWARLDHKFDLM
Sbjct: 342 RGINFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLM 401
Query: 267 YGKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 148
Y KRAFVHW+VGEGMEEGEF EAR+DLAALEKDY EV D
Sbjct: 402 YSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAEVSRD 441
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 130 bits (313), Expect = 6e-31
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = -2
Query: 339 VCMLSNTTAIAEAWARLDHKFDLMYGKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 160
VCMLS+TTAIAEAW+RLD+KFDLMY KRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEE
Sbjct: 10 VCMLSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
Query: 159 VGMD 148
VG D
Sbjct: 70 VGAD 73
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 64.9 bits (151), Expect = 3e-11
Identities = 26/64 (40%), Positives = 43/64 (67%)
Frame = -2
Query: 351 VQRAVCMLSNTTAIAEAWARLDHKFDLMYGKRAFVHWYVGEGMEEGEFSEAREDLAALEK 172
V+ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 VKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 171 DYEE 160
+Y++
Sbjct: 421 EYQQ 424
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 63.3 bits (147), Expect = 8e-11
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = -2
Query: 351 VQRAVCMLSNTTAIAEAWARLDHKFDLMYGKRAFVHWYVGEGMEEGEFSEAREDLAALEK 172
++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLIS 420
Query: 171 DYEE 160
+Y++
Sbjct: 421 EYQQ 424
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 63.3 bits (147), Expect = 8e-11
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = -2
Query: 351 VQRAVCMLSNTTAIAEAWARLDHKFDLMYGKRAFVHWYVGEGMEEGEFSEAREDLAALEK 172
++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLIS 420
Query: 171 DYEE 160
+Y++
Sbjct: 421 EYQQ 424
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 62.9 bits (146), Expect = 1e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -2
Query: 351 VQRAVCMLSNTTAIAEAWARLDHKFDLMYGKRAFVHWYVGEGMEEGEFSEAREDLAALEK 172
++ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 171 DYEE 160
+Y++
Sbjct: 421 EYQQ 424
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 62.9 bits (146), Expect = 1e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -2
Query: 351 VQRAVCMLSNTTAIAEAWARLDHKFDLMYGKRAFVHWYVGEGMEEGEFSEAREDLAALEK 172
++ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 171 DYEE 160
+Y++
Sbjct: 421 EYQQ 424
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 62.9 bits (146), Expect = 1e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -2
Query: 351 VQRAVCMLSNTTAIAEAWARLDHKFDLMYGKRAFVHWYVGEGMEEGEFSEAREDLAALEK 172
++ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 171 DYEE 160
+Y++
Sbjct: 421 EYQQ 424
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 44.4 bits (100), Expect = 4e-05
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Frame = -2
Query: 351 VQRAVCMLSNTTAIAEAWARLDHKFDLMYGKRAFVHWYVGEGMEEGEFSEAR---EDLAA 181
++ + ++N+TAI E R+ +F ++ ++AF+HWY MEE EF++A DL +
Sbjct: 359 LKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLIS 415
Query: 180 LEKDYEEV 157
+ YE+V
Sbjct: 416 EFQQYEKV 423
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 44.4 bits (100), Expect = 4e-05
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Frame = -2
Query: 351 VQRAVCMLSNTTAIAEAWARLDHKFDLMYGKRAFVHWYVGEGMEEGEFSEAR---EDLAA 181
++ + ++N+TAI E R+ +F ++ ++AF+HWY MEE EF++A DL +
Sbjct: 359 LKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLIS 415
Query: 180 LEKDYEEV 157
+ YE+V
Sbjct: 416 EFQQYEKV 423
>Z82059-12|CAB04880.1| 622|Caenorhabditis elegans Hypothetical
protein T27E9.7 protein.
Length = 622
Score = 28.7 bits (61), Expect = 2.0
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 235 DVPVHEGALTVHQVELVVETSPGLGDSGGIGQHADGALHLGE-ITDGHHGRGLVVDTDLE 411
D + + A T+ ++EL E + +G + G H E +T HGR +VVDT LE
Sbjct: 46 DEELDQAAATLAKIEL--ENAAARSVAGSLTSDPKGLDHRVESLTITFHGREIVVDTKLE 103
>AL032665-2|CAA21772.1| 622|Caenorhabditis elegans Hypothetical
protein T27E9.7 protein.
Length = 622
Score = 28.7 bits (61), Expect = 2.0
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 235 DVPVHEGALTVHQVELVVETSPGLGDSGGIGQHADGALHLGE-ITDGHHGRGLVVDTDLE 411
D + + A T+ ++EL E + +G + G H E +T HGR +VVDT LE
Sbjct: 46 DEELDQAAATLAKIEL--ENAAARSVAGSLTSDPKGLDHRVESLTITFHGREIVVDTKLE 103
>U41556-9|AAK39192.1| 692|Caenorhabditis elegans Potassium channel,
kvqlt familyprotein 1, isoform a protein.
Length = 692
Score = 27.9 bits (59), Expect = 3.6
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = -2
Query: 363 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY----GKRAFVHWYVGEGMEEGEFSE-- 202
++ K++ + M + + ++D K DLM G++A + GEFSE
Sbjct: 565 NIEKIEPKISMFTRIATLETTVGKMDKKLDLMVEMLMGRQASQRVFSQNTSPRGEFSEPT 624
Query: 201 -AREDLAALEKDYEEVGMD 148
AR+DL + M+
Sbjct: 625 SARQDLTRSRRSMVSTDME 643
>U41556-8|AAM51518.1| 740|Caenorhabditis elegans Potassium channel,
kvqlt familyprotein 1, isoform b protein.
Length = 740
Score = 27.9 bits (59), Expect = 3.6
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = -2
Query: 363 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY----GKRAFVHWYVGEGMEEGEFSE-- 202
++ K++ + M + + ++D K DLM G++A + GEFSE
Sbjct: 613 NIEKIEPKISMFTRIATLETTVGKMDKKLDLMVEMLMGRQASQRVFSQNTSPRGEFSEPT 672
Query: 201 -AREDLAALEKDYEEVGMD 148
AR+DL + M+
Sbjct: 673 SARQDLTRSRRSMVSTDME 691
>AY572974-1|AAT77227.1| 692|Caenorhabditis elegans KQT-1 potassium
channel protein.
Length = 692
Score = 27.9 bits (59), Expect = 3.6
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = -2
Query: 363 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY----GKRAFVHWYVGEGMEEGEFSE-- 202
++ K++ + M + + ++D K DLM G++A + GEFSE
Sbjct: 565 NIEKIEPKISMFTRIATLETTVGKMDKKLDLMVEMLMGRQASQRVFSQNTSPRGEFSEPT 624
Query: 201 -AREDLAALEKDYEEVGMD 148
AR+DL + M+
Sbjct: 625 SARQDLTRSRRSMVSTDME 643
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -2
Query: 333 MLSNTTAIAEAWARLDHKFDLMYGKRAFV 247
+L+N+T++A + L K+D + KRAF+
Sbjct: 375 LLNNSTSVAPLFESLLSKYDKLRSKRAFI 403
>U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine
receptor, class x protein56 protein.
Length = 298
Score = 27.5 bits (58), Expect = 4.7
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Frame = +1
Query: 19 VFFFFCSIIIFLYFTGNVSVCEPPSNI---------FIGLVLFGSLTLSLGGVHADFFVV 171
VF+ FC + +F G +S + ++ F +VLF T+ H FF++
Sbjct: 25 VFYSFCKLPVFKNAFGILSANQAFADALHSTTFLLYFCPMVLFDQSTMKQYSHHCGFFIL 84
Query: 172 LLESGQVLTSF 204
L +LT F
Sbjct: 85 FLSEFSILTHF 95
>AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical
protein F57E7.3 protein.
Length = 330
Score = 27.5 bits (58), Expect = 4.7
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Frame = +1
Query: 13 SRVFFFFCSIIIFLYFTGNVS--VCEPPSNIFIGL----------VLFGSLTLSLGGVHA 156
S++ FFF + FL+ T +S E +FI L V + L++ G+
Sbjct: 209 SQIIFFFYKTLTFLFKTRTISQKTTEMQKKLFINLCIQITVPLVVVFVPCVYLNISGLFN 268
Query: 157 DFFVVLLESGQVLTSFGELTLLHTLTDVPVHEG 255
+++ GQ++ S LL T+T + VH+G
Sbjct: 269 HLDMLIDNIGQLIIS--THGLLSTITTLTVHKG 299
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -2
Query: 333 MLSNTTAIAEAWARLDHKFDLMYGKRAFV 247
+L+N+T++A + L K+D + KRAF+
Sbjct: 375 LLNNSTSVAPLFESLLSKYDKLRSKRAFI 403
>Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical
protein C34F6.9 protein.
Length = 1181
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 227 VWRRVSSPKLVRTWPLSRRTTKKSAWTP-PRERVRDPKSTKP 105
+W R + + T+P +++ K++A P P DP++ KP
Sbjct: 511 IWSRTVTYPPIHTFPKTKKYVKQAAKIPQPAVLKEDPQAVKP 552
>U41270-2|AAA82440.1| 298|Caenorhabditis elegans Cell-death-related
nuclease protein4 protein.
Length = 298
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Frame = -2
Query: 279 FDLMYGKRAFVHWYVGEGMEEGEFS---EAREDL 187
FD++Y + F W + G+EEG+F+ ++R+DL
Sbjct: 85 FDVVYEQ--FQQWLITLGLEEGKFAFVCDSRQDL 116
>AY303578-1|AAP57300.1| 298|Caenorhabditis elegans cell
death-related nuclease 4 protein.
Length = 298
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Frame = -2
Query: 279 FDLMYGKRAFVHWYVGEGMEEGEFS---EAREDL 187
FD++Y + F W + G+EEG+F+ ++R+DL
Sbjct: 85 FDVVYEQ--FQQWLITLGLEEGKFAFVCDSRQDL 116
>AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical
protein Y105E8A.23b protein.
Length = 1156
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -2
Query: 309 AEAWARLDHKFDLMYGKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 157
A++W ++ FD M K A + V ++ E EDL +++K+ +++
Sbjct: 177 AKSWKTIEDLFDEMQRKMALLAQNVRISDQQLEVFIGTEDLKSIQKEVDQI 227
>AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical
protein Y105E8A.23a protein.
Length = 1138
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -2
Query: 309 AEAWARLDHKFDLMYGKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 157
A++W ++ FD M K A + V ++ E EDL +++K+ +++
Sbjct: 177 AKSWKTIEDLFDEMQRKMALLAQNVRISDQQLEVFIGTEDLKSIQKEVDQI 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,585,002
Number of Sequences: 27780
Number of extensions: 131405
Number of successful extensions: 640
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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