Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_F11
         (448 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   2.7  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   2.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   2.7  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   3.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   6.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   6.1  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    21   8.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.1  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 330 LSNTTAIAEAWARLDHKFD 274
           L+NT  +   W  LD+ FD
Sbjct: 32  LTNTLNVIHKWKYLDYDFD 50


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
          protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 28 FFCSIIIFLYFTGNVSVC 81
          F   I+IFL   GN+ VC
Sbjct: 30 FLFLILIFLSVAGNILVC 47


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 13/53 (24%), Positives = 26/53 (49%)
 Frame = +1

Query: 52  LYFTGNVSVCEPPSNIFIGLVLFGSLTLSLGGVHADFFVVLLESGQVLTSFGE 210
           L+ + N+S+ EPP    + L L  SL  +L     + + ++ E    + ++ E
Sbjct: 235 LFESANISLDEPPLGKNLNLSLHASLNHTLTKDQPETYELVKEWRDFVDNYAE 287


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 298 PGLGDSGGIGQHADGALHLGEITDGHHGRGLVVDTDLETGLTSV 429
           PG   +GG+   A G   +    +G  G GL + + L   L+ V
Sbjct: 22  PGSSSAGGVVTGASGGSIVVGANNGGGGGGLGIASGLSAMLSLV 65


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = +1

Query: 349 HLGEITDGHHGRGLVVDTDLETGLTSVHELD 441
           H G+ +  HHG       D++  L ++   D
Sbjct: 397 HSGQSSSHHHGSKSWTQEDMDAALEALRNHD 427


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 301 GLGDSGGIGQHADGALHLG 357
           GLG   G G+H  G   +G
Sbjct: 203 GLGVQNGYGRHLPGHAQMG 221


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 244 VHEGALTVHQVELVVETSPGLGDSGGIGQHA 336
           VHE      +  LV E    + D+  I QHA
Sbjct: 496 VHEDVSPTFEKPLVREIEKTIDDARFIAQHA 526


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 212 SPSSIPSPTYQC 247
           SP++ PSP  QC
Sbjct: 740 SPNASPSPAEQC 751


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +2

Query: 215  PSSIPSPTYQCTKARLPYIKSNLWS 289
            P+ I  P++      LP+   N W+
Sbjct: 1141 PNGIKMPSFMEGMPHLPFTPFNFWN 1165


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,316
Number of Sequences: 438
Number of extensions: 1733
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)