Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_F09
         (550 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745218-1|AAU93485.1|  159|Anopheles gambiae cytochrome P450 pr...    30   0.058
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   5.0  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   8.8  

>AY745218-1|AAU93485.1|  159|Anopheles gambiae cytochrome P450
           protein.
          Length = 159

 Score = 29.9 bits (64), Expect = 0.058
 Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
 Frame = +1

Query: 202 LRRIPQRYVIG--TSTKVDLGDFKLPAHLD 285
           LR +P   V+G  T+ +VDLG ++LPA +D
Sbjct: 63  LRLLPIAAVVGRRTTAEVDLGQYRLPADID 92


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -3

Query: 467 SVFLSGRSLIAFITASSTSFWSALRCSDG 381
           ++ +SG+SL++F  ASS +  +    +DG
Sbjct: 353 AIAVSGQSLVSFCLASSKTLVNEANKNDG 381


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
 Frame = -3

Query: 212 ILRRGHALKAKGPVKSSRPLGNTPTSTTRLPACL--PANR 99
           I +  HA   K P     P   +P S  R P+C   PA R
Sbjct: 239 IYKNAHASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPARR 278


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,044
Number of Sequences: 2352
Number of extensions: 9504
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)