Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_F09
         (550 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...   184   7e-47
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...   184   7e-47
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...   184   7e-47
AF199369-2|AAF09580.1|  318|Drosophila melanogaster MEI-P22 prot...    29   4.1  
AE013599-3130|AAF46673.1|  995|Drosophila melanogaster CG15655-P...    29   4.1  

>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score =  184 bits (448), Expect = 7e-47
 Identities = 94/173 (54%), Positives = 113/173 (65%), Gaps = 1/173 (0%)
 Frame = +1

Query: 16  IRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNA 195
           ++ R    +FS+H R TR NLTPGTV ILLAGRH GKR              TGPFA N+
Sbjct: 94  VKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTGPFALNS 153

Query: 196 CPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQGE-DIFATKKE 372
           CPLRR+ QRYVIGTS+KVDLG FK+P HL+DAYF               GE DIFA KKE
Sbjct: 154 CPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYF----RRLKAKKDKKTGEADIFAAKKE 209

Query: 373 KYVPSEQRKADQKLVDEAVIKAIRLRPDKKTLRGYLRASFGLRSSQFPHRLRF 531
           ++VP+EQRK DQK VD A++K I+  P+ K    YL+  F L SSQ+PHR+RF
Sbjct: 210 RFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQNMFALHSSQYPHRMRF 262


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score =  184 bits (448), Expect = 7e-47
 Identities = 94/173 (54%), Positives = 113/173 (65%), Gaps = 1/173 (0%)
 Frame = +1

Query: 16  IRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNA 195
           ++ R    +FS+H R TR NLTPGTV ILLAGRH GKR              TGPFA N+
Sbjct: 94  VKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTGPFALNS 153

Query: 196 CPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQGE-DIFATKKE 372
           CPLRR+ QRYVIGTS+KVDLG FK+P HL+DAYF               GE DIFA KKE
Sbjct: 154 CPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYF----RRLKAKKDKKTGEADIFAAKKE 209

Query: 373 KYVPSEQRKADQKLVDEAVIKAIRLRPDKKTLRGYLRASFGLRSSQFPHRLRF 531
           ++VP+EQRK DQK VD A++K I+  P+ K    YL+  F L SSQ+PHR+RF
Sbjct: 210 RFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQNMFALHSSQYPHRMRF 262


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score =  184 bits (448), Expect = 7e-47
 Identities = 94/173 (54%), Positives = 113/173 (65%), Gaps = 1/173 (0%)
 Frame = +1

Query: 16  IRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNA 195
           ++ R    +FS+H R TR NLTPGTV ILLAGRH GKR              TGPFA N+
Sbjct: 75  VKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTGPFALNS 134

Query: 196 CPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQGE-DIFATKKE 372
           CPLRR+ QRYVIGTS+KVDLG FK+P HL+DAYF               GE DIFA KKE
Sbjct: 135 CPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYF----RRLKAKKDKKTGEADIFAAKKE 190

Query: 373 KYVPSEQRKADQKLVDEAVIKAIRLRPDKKTLRGYLRASFGLRSSQFPHRLRF 531
           ++VP+EQRK DQK VD A++K I+  P+ K    YL+  F L SSQ+PHR+RF
Sbjct: 191 RFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQNMFALHSSQYPHRMRF 243


>AF199369-2|AAF09580.1|  318|Drosophila melanogaster MEI-P22 protein
           protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
 Frame = -3

Query: 221 RCGILRRGHALKAKGPVK------SSRPLGNTPTSTTRLPACLPANRMHTVP 84
           +C   +RG   K K P K      S+  LGNTP S ++LPA  PA+ +H +P
Sbjct: 149 QCTPKKRGR--KPKQPAKKLQSRISTDQLGNTP-SPSKLPAKYPAHFVHQLP 197


>AE013599-3130|AAF46673.1|  995|Drosophila melanogaster CG15655-PA
           protein.
          Length = 995

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 429 DKGDQTPARQEDTPRLPQGLVRAPIESVPAP 521
           D  ++T  R    P++PQG V API   P P
Sbjct: 268 DATEETHPRPR-APKIPQGFVAAPIRGAPPP 297


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,904,302
Number of Sequences: 53049
Number of extensions: 435910
Number of successful extensions: 1549
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1546
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)