Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_F07
         (489 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   2.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   2.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   3.4  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   4.5  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   4.5  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   4.5  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   4.5  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -1

Query: 249 HHYQPGDQQGRPQKHAPLDPQMQFLFPG 166
           HH     Q+  PQ H P   Q   ++ G
Sbjct: 165 HHMGHHMQEQHPQHHQPHHQQQHMMYGG 192


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -1

Query: 249 HHYQPGDQQGRPQKHAPLDPQMQFLFPG 166
           HH     Q+  PQ H P   Q   ++ G
Sbjct: 167 HHMGHHMQEQHPQHHQPHHQQQHMMYGG 194


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 119 VHVHQETSGHHPCQSHPGNK 178
           V ++    G+HP  S+P N+
Sbjct: 151 VSMNMTMHGYHPSSSYPANE 170


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 335 EVHAVEIAENIT 300
           E+H ++I ENIT
Sbjct: 479 EIHFIDIGENIT 490


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 335 EVHAVEIAENIT 300
           E+H ++I ENIT
Sbjct: 481 EIHFIDIGENIT 492


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 335 EVHAVEIAENIT 300
           E+H ++I ENIT
Sbjct: 479 EIHFIDIGENIT 490


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 335 EVHAVEIAENIT 300
           E+H ++I ENIT
Sbjct: 481 EIHFIDIGENIT 492


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,992
Number of Sequences: 336
Number of extensions: 2570
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)