Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_F06
(512 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 74 2e-15
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 74 2e-15
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 74 2e-15
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 74 2e-15
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 27 0.49
AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein. 27 0.49
AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein. 27 0.49
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 24 3.5
AJ441131-2|CAD29631.1| 208|Anopheles gambiae hypothetical prote... 23 4.6
AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P... 23 6.1
AJ439398-1|CAD28124.1| 208|Anopheles gambiae hypothetical prote... 23 6.1
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 74.1 bits (174), Expect = 2e-15
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +3
Query: 399 HYTEGAELVDSVLHVVRKEAESCDCIQRFQLTHSLGGG 512
HYTEGAELVD+VL VVRKE E+CDC+Q FQLTHSLGGG
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGG 38
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 74.1 bits (174), Expect = 2e-15
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +3
Query: 399 HYTEGAELVDSVLHVVRKEAESCDCIQRFQLTHSLGGG 512
HYTEGAELVD+VL VVRKE E+CDC+Q FQLTHSLGGG
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGG 38
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 74.1 bits (174), Expect = 2e-15
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +3
Query: 399 HYTEGAELVDSVLHVVRKEAESCDCIQRFQLTHSLGGG 512
HYTEGAELVD+VL VVRKE E+CDC+Q FQLTHSLGGG
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGG 38
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 74.1 bits (174), Expect = 2e-15
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +3
Query: 399 HYTEGAELVDSVLHVVRKEAESCDCIQRFQLTHSLGGG 512
HYTEGAELVD+VL VVRKE E+CDC+Q FQLTHSLGGG
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGG 38
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 26.6 bits (56), Expect = 0.49
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 87 MREIVHIQAGQCGNQIGAKFWE 152
MRE + + GQ G QIG W+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
>AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein.
Length = 259
Score = 26.6 bits (56), Expect = 0.49
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 439 CKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKG 323
CK T + + CPL ++ DC +L KI KG
Sbjct: 194 CKATGTKAHTAKYCPLKPVITPEDCLAMELRRHKIHRKG 232
>AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein.
Length = 260
Score = 26.6 bits (56), Expect = 0.49
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 439 CKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKG 323
CK T + + CPL ++ DC +L KI KG
Sbjct: 195 CKATGTKAHTAKYCPLKPVITPEDCLAMELRRHKIHRKG 233
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 23.8 bits (49), Expect = 3.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 188 TGGVDAVLIGDDLPELSSNLVSALSGLDVHD 96
TGG ++ LIG L++ LV +L L D
Sbjct: 788 TGGTESQLIGAIFKTLATRLVQSLKELKSQD 818
>AJ441131-2|CAD29631.1| 208|Anopheles gambiae hypothetical protein
protein.
Length = 208
Score = 23.4 bits (48), Expect = 4.6
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +3
Query: 264 VPRAILVDLEPGTMDSVRSGPFGQIF----RPDNFVFGQSGAGNNWAKGHYTEGAEL 422
+P + L G+ +S FG F RP N+ + ++ NN + H T A L
Sbjct: 106 LPSLAITGLSIGSSNSSFLRQFGPQFTGTKRPQNWFYSRNNNNNNNNEHHNTYNARL 162
>AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P450
reductase protein.
Length = 679
Score = 23.0 bits (47), Expect = 6.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 141 KFWEIISDEHGIDPTG 188
KFW + D GI+ TG
Sbjct: 225 KFWPTVCDYFGIESTG 240
>AJ439398-1|CAD28124.1| 208|Anopheles gambiae hypothetical protein
protein.
Length = 208
Score = 23.0 bits (47), Expect = 6.1
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +3
Query: 264 VPRAILVDLEPGTMDSVRSGPFGQIF----RPDNFVFGQSGAGNNWAKGHYTEGAEL 422
+P + L G+ +S FG F RP N+ + ++ NN + H T A L
Sbjct: 106 LPSLAITGLSIGSSNSRFLRQFGPQFTGTNRPQNWFYSRNNNNNNNNEHHNTYNARL 162
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,796
Number of Sequences: 2352
Number of extensions: 11624
Number of successful extensions: 33
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -