Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_F05
(589 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 213 3e-54
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 184 1e-45
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 156 4e-37
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 148 8e-35
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 140 2e-32
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 139 4e-32
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 135 6e-31
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 134 2e-30
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 131 1e-29
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 127 2e-28
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 125 7e-28
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 125 9e-28
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 98 1e-19
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 93 6e-18
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 75 1e-12
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 70 4e-11
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 70 4e-11
UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1; Encepha... 65 1e-09
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 53 6e-06
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 40 0.057
UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2; Thermoprot... 39 0.100
UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1; Methano... 37 0.40
UniRef50_Q2RY86 Cluster: Alpha-2-macroglobulin-like protein prec... 36 0.70
UniRef50_Q3JMF5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.2
UniRef50_A0CQ05 Cluster: Chromosome undetermined scaffold_237, w... 35 1.6
UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured... 34 2.8
UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12; Archa... 34 2.8
UniRef50_Q1DDG8 Cluster: Putative uncharacterized protein; n=1; ... 33 3.7
UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2; Methano... 33 3.7
UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S riboso... 33 4.9
UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse tran... 33 6.5
UniRef50_Q2GZD3 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_Q8PW46 Cluster: 50S ribosomal protein L18e; n=16; Eurya... 33 6.5
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 213 bits (519), Expect = 3e-54
Identities = 107/183 (58%), Positives = 126/183 (68%), Gaps = 2/183 (1%)
Frame = +2
Query: 47 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 226
MG+DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 227 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 406
+SLSR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AGG+I
Sbjct: 61 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKI 120
Query: 407 LTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTNGH--EHARPS 580
LTFDQLAL +P G TVL+ G R RE RHFG APG P SHTKPYVR+ G E AR
Sbjct: 121 LTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGR 180
Query: 581 RRS 589
R S
Sbjct: 181 RAS 183
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 184 bits (448), Expect = 1e-45
Identities = 95/174 (54%), Positives = 121/174 (69%), Gaps = 2/174 (1%)
Frame = +2
Query: 74 DRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISLSRLARH 253
++K +RT KS D+ T++ FN +IL+RLFMS++NRPP+SLSRL ++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 254 MKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALR 433
M+ +EG I VVVG V++D+R+Y VP + V AL TE ARARI AGGE LTFDQLALR
Sbjct: 68 MQG--KEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALR 125
Query: 434 APTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTNGH--EHARPSRRS 589
P TVL++G +NAREAV+HFGPAPG P SHTKPYVR+ G E AR R+S
Sbjct: 126 LPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKS 178
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 156 bits (378), Expect = 4e-37
Identities = 85/184 (46%), Positives = 116/184 (63%), Gaps = 3/184 (1%)
Frame = +2
Query: 47 MGIDINHK-HDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRP 223
MGID K H R RT KS +V T+A FN+++L+ LF+S+INRP
Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP 60
Query: 224 PISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGE 403
P+S+SR+AR +K+ VVVGTV++D R++ PK TVAAL T ARA+I+ AGGE
Sbjct: 61 PVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGE 120
Query: 404 ILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTNGH--EHARP 577
+T DQLA+RAP G+ T++++G RN+REAVRHFG P ++ P + + G E AR
Sbjct: 121 CITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMGPHKGKA---PRILSTGRKFERARG 177
Query: 578 SRRS 589
RRS
Sbjct: 178 RRRS 181
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 148 bits (359), Expect = 8e-35
Identities = 82/187 (43%), Positives = 114/187 (60%), Gaps = 3/187 (1%)
Frame = +2
Query: 38 VVKMGIDI-NHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRI 214
++ MGID+ N +K R + S++ T+ FN+II +RL M +
Sbjct: 54 LINMGIDLKNVGRIKKHGRKNLVSKNPYLRLLVKLYRFLARRTDVNFNKIIAKRLIMPKR 113
Query: 215 NRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAA 394
RPP+SLS+L +HM + +AVVVG++++D RL++ M V AL TE AR RI+ A
Sbjct: 114 FRPPLSLSKLQQHMSN--NQNSVAVVVGSITDDKRLFSCRNMKVCALRFTETARKRIVDA 171
Query: 395 GGEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTNGH--EH 568
GGE LTFDQLALR PTG+ +L++G AR A +HFG APG P+S +PYVR+ G E
Sbjct: 172 GGECLTFDQLALRYPTGKDCILLRGPTKARTAEKHFGSAPGRPKSKARPYVRSKGRKFEK 231
Query: 569 ARPSRRS 589
AR R+S
Sbjct: 232 ARGRRKS 238
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 140 bits (339), Expect = 2e-32
Identities = 75/147 (51%), Positives = 99/147 (67%), Gaps = 6/147 (4%)
Frame = +2
Query: 161 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKP------TREGLIAVVVGTVSNDVRL 322
T++ FN+++ +RL SR NR PISLSR+A MK+ ++ IAVVVG V +DVR+
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRM 99
Query: 323 YTVPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHF 502
+P M V AL ++ AR I+AAGGE LTFDQLA+ APTG+ T L++GR++ RE+VRHF
Sbjct: 100 ARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYLLRGRKSGRESVRHF 159
Query: 503 GPAPGAPRSHTKPYVRTNGHEHARPSR 583
G A G P SH+KPY G E R R
Sbjct: 160 G-ASGVPGSHSKPYATNRGKETKRGRR 185
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 139 bits (337), Expect = 4e-32
Identities = 75/145 (51%), Positives = 100/145 (68%), Gaps = 2/145 (1%)
Frame = +2
Query: 161 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 340
T+ FN+++L+RL M R + P+SLS+L++HM+K R AVVVGTV+ND R+ VPK+
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK--RPDNTAVVVGTVTNDERMDVVPKL 97
Query: 341 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGA 520
+V AL VTE AR RILA+GGE+LTFDQL R+PTG + L++G AREAV+HF
Sbjct: 98 SVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGATKAREAVKHF---RNE 154
Query: 521 PRSHTKPYVRTNGH--EHARPSRRS 589
+ + KPYVR+ G E AR R S
Sbjct: 155 VKGNPKPYVRSKGRKFEKARGRRHS 179
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 135 bits (327), Expect = 6e-31
Identities = 70/129 (54%), Positives = 90/129 (69%)
Frame = +2
Query: 161 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 340
T+++FN +LRRL +R R PIS+SRL + + + VVVGTV++D RL TVPK+
Sbjct: 255 TDSQFNATVLRRLQSTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDARLLTVPKL 314
Query: 341 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGA 520
V AL TE AR RILAAGG+ LTFDQLA + PTG T+L++G + REA++HFG A G
Sbjct: 315 NVCALRFTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPK-VREALKHFGRAAGL 373
Query: 521 PRSHTKPYV 547
P SH KPYV
Sbjct: 374 PGSHAKPYV 382
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 134 bits (323), Expect = 2e-30
Identities = 63/112 (56%), Positives = 87/112 (77%)
Frame = +2
Query: 161 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 340
TNAKFN I+L+RLFMSR N+ +SL+R+ R M K REG AVVVG +++DVR++ +PK+
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVGCITDDVRIHKLPKL 68
Query: 341 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNAREAVR 496
+ AL VT +ARARI+ AGGEI+TFDQLAL++P G+ TVL+QG ++ + R
Sbjct: 69 KICALRVTARARARIIKAGGEIITFDQLALQSPKGQNTVLMQGFKSETDMER 120
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 131 bits (317), Expect = 1e-29
Identities = 76/177 (42%), Positives = 99/177 (55%), Gaps = 1/177 (0%)
Frame = +2
Query: 47 MGIDINHK-HDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRP 223
MGID+ RKV R E KS + T F +++ +RL +S+ NRP
Sbjct: 1 MGIDLKTGIKKRKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRP 60
Query: 224 PISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGE 403
+S+SRLA M K RE IAVV TV+ND RL T+P+MT+ AL + AR+RI AGG
Sbjct: 61 VLSVSRLAHLMHK--REDKIAVVASTVTNDERLVTIPRMTICALKFSATARSRIEKAGGR 118
Query: 404 ILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTNGHEHAR 574
++FD+L PTG VL+QGRR+ R + FG +PG P SH KP G AR
Sbjct: 119 CMSFDELLAEKPTGDNCVLLQGRRSCRAVCKKFG-SPGRPNSHVKPKGEHKGRRGAR 174
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 127 bits (307), Expect = 2e-28
Identities = 72/153 (47%), Positives = 92/153 (60%)
Frame = +2
Query: 47 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 226
M ID++ H RK + + T +KF + IL RL +SR+NRP
Sbjct: 1 MAIDLDRHHVRKHVSKTARGNNAYMKLLVRLYGFLARRTQSKFAKTILHRLCLSRVNRPI 60
Query: 227 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 406
+S S+LA MKK E AV V TV+ D R Y VPKM V AL T+ A A I AGG+
Sbjct: 61 VSTSKLACLMKKHPEE--TAVCVNTVTYDSR-YPVPKMNVCALKFTKTAEAAITKAGGKC 117
Query: 407 LTFDQLALRAPTGRKTVLVQGRRNAREAVRHFG 505
L FD+LAL+APTGRKTVL++G+RN REA++HFG
Sbjct: 118 LRFDELALKAPTGRKTVLIRGKRNVREALKHFG 150
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 125 bits (302), Expect = 7e-28
Identities = 69/129 (53%), Positives = 87/129 (67%)
Frame = +2
Query: 161 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 340
T++ FN +LRRL +R R PIS+SRL + + + VVVGTV++DVRL TVPK+
Sbjct: 335 TDSNFNATVLRRLQQTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDVRLLTVPKI 394
Query: 341 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGA 520
V TE AR RILAAGG+ LTFDQLA + PTG T+L++G R RE ++HFG A G
Sbjct: 395 KV----FTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPR-VREELKHFGRAAGL 449
Query: 521 PRSHTKPYV 547
P SH KPYV
Sbjct: 450 PGSHAKPYV 458
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 125 bits (301), Expect = 9e-28
Identities = 65/122 (53%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
Frame = +2
Query: 215 NRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAA 394
N+PP+SLSR+ MK P +E AVVVGT+++DV + VPK+ V AL VT +AR+ I+
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRV 152
Query: 395 GGEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTNGH--EH 568
GG+ LTFDQLAL +P TVL+ G R RE HF A G P SHTKPYVR+ G E+
Sbjct: 153 GGKNLTFDQLALDSPKVCSTVLLSGPRKGREVYWHFDKALGTPHSHTKPYVRSKGRKFEY 212
Query: 569 AR 574
AR
Sbjct: 213 AR 214
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 98.3 bits (234), Expect = 1e-19
Identities = 50/113 (44%), Positives = 71/113 (62%)
Frame = +2
Query: 221 PPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGG 400
PP+ LSR+ R MK E A V+GTV++++R+ VPK+ V+AL VT AR+RIL A G
Sbjct: 47 PPLPLSRMIRKMKLEGTENKTAAVMGTVTDNIRIQDVPKLKVSALRVTSNARSRILKANG 106
Query: 401 EILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTNG 559
+IL+FDQLA+ +P +G + + RH G G+P S+ KPYV + G
Sbjct: 107 KILSFDQLAMTSP--------KGPQKCYQGYRHLGKVSGSPHSYAKPYVGSTG 151
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 92.7 bits (220), Expect = 6e-18
Identities = 50/96 (52%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = +2
Query: 308 NDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNARE 487
+D R+ VPK++V AL VTE AR RILA+GGE+LTFDQL R+P G K L++G ARE
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKARE 184
Query: 488 AVRHFGPAPGAPRSHTKPYVRTNGH--EHARPSRRS 589
AV+HF + + KPYVR+ G E AR R S
Sbjct: 185 AVKHF---RNEVKGNPKPYVRSKGRKFEKARGRRHS 217
Score = 55.2 bits (127), Expect = 1e-06
Identities = 29/68 (42%), Positives = 45/68 (66%)
Frame = +2
Query: 161 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 340
T+ FN+I+L+RL M R + P+SLS+L++HM+ +R AVV+GTV++ L +P
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIGTVTSTESLGMIPST 97
Query: 341 TVAALHVT 364
TV + VT
Sbjct: 98 TVTLVLVT 105
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 74.9 bits (176), Expect = 1e-12
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = +2
Query: 47 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 226
+G+DI H DRKVRR E KSQD+ TN+ FN+++L+RLFMSR NRPP
Sbjct: 110 LGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRPP 169
Query: 227 ISLSRL 244
++LSR+
Sbjct: 170 LALSRM 175
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 70.1 bits (164), Expect = 4e-11
Identities = 39/113 (34%), Positives = 64/113 (56%)
Frame = +2
Query: 47 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 226
+G+ ++ K +K + T KS D+ T +KFN + L+R FMS++N+ P
Sbjct: 3 IGLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLP 61
Query: 227 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARI 385
+ LSRL R M ++G I VV+G+V++D+R+Y V + V L T++ R I
Sbjct: 62 LLLSRLVRFM--DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 70.1 bits (164), Expect = 4e-11
Identities = 39/113 (34%), Positives = 64/113 (56%)
Frame = +2
Query: 47 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 226
+G+ ++ K +K + T KS D+ T +KFN + L+R FMS++N+ P
Sbjct: 3 IGLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLP 61
Query: 227 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARI 385
+ LSRL R M ++G I VV+G+V++D+R+Y V + V L T++ R I
Sbjct: 62 LLLSRLVRFM--DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L18
- Encephalitozoon cuniculi
Length = 200
Score = 64.9 bits (151), Expect = 1e-09
Identities = 43/133 (32%), Positives = 67/133 (50%)
Frame = +2
Query: 185 ILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVT 364
I +RL MS+ +R P+ +S++ + + + +AVVV V +D + +P + V AL +
Sbjct: 52 ISKRLKMSKSDRQPVKISKIVSEIGESKDK--VAVVVAKVLDDDEVMVIPAVKVVALQWS 109
Query: 365 EKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPY 544
+ + +I GG I T DQL P LV + +R + + +GPAPG S T Y
Sbjct: 110 KGVKEKIERYGGTIGTLDQLFELCPNMDDICLVSTNKFSRRSAKFWGPAPGEKGSTT--Y 167
Query: 545 VRTNGHEHARPSR 583
R N H R R
Sbjct: 168 PRANQKCHNREKR 180
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 52.8 bits (121), Expect = 6e-06
Identities = 28/102 (27%), Positives = 56/102 (54%)
Frame = +2
Query: 170 KFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVA 349
KF + ++RR SR +R ISLS+L + K T + ++ V + ND R+ PK+ +
Sbjct: 67 KFLKELIRRTNSSRKSRSVISLSKLIKFSLKDTTKSILTV--SKILNDERISKTPKLKIF 124
Query: 350 ALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRR 475
AL+ + + +I+ GG+I +++ + K + ++G++
Sbjct: 125 ALNFSSSVKKKIIENGGQIFKLNEIKVDDFLNMKILFIRGKK 166
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 39.5 bits (88), Expect = 0.057
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = +2
Query: 254 MKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALR 433
+ + +EG + VV G + +L K+ VAA+ ++ KA +++ AGGE+LT +L +
Sbjct: 54 LNRVAKEGDVVVVPGKLLAGGQLNK--KIIVAAVKISPKAARKVIEAGGEVLTIPELVRK 111
Query: 434 APTG 445
P G
Sbjct: 112 YPRG 115
>UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2;
Thermoprotei|Rep: Ribosomal protein L18E - Cenarchaeum
symbiosum
Length = 126
Score = 38.7 bits (86), Expect = 0.100
Identities = 24/82 (29%), Positives = 45/82 (54%)
Frame = +2
Query: 218 RPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAG 397
R ++L+++AR+ T+EG + VV G V + K+T+ ++ A ++L++G
Sbjct: 50 RRTLNLNKIARY----TKEGDVVVVPGRVLGTGSM--PHKITLCPFGISGAAAEKVLSSG 103
Query: 398 GEILTFDQLALRAPTGRKTVLV 463
G + F +L PTG+ VL+
Sbjct: 104 GRVTGFAELTKEFPTGKGVVLL 125
>UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1;
Methanococcus aeolicus Nankai-3|Rep: 50S ribosomal
protein L15 - Methanococcus aeolicus Nankai-3
Length = 120
Score = 36.7 bits (81), Expect = 0.40
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +2
Query: 176 NQIILRRLFMSRINRPPISLSRL-ARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAA 352
N + + + R+++P +S + + + T E + VV G V +L K+TVAA
Sbjct: 25 NDVKIWKDLAKRLSKPSRIISEVNVSRLNRYTEENHVVVVPGKVLGSGKL--AHKITVAA 82
Query: 353 LHVTEKARARILAAGGEILTFDQLALRAPTG 445
+E A+ + AGG +T +L P G
Sbjct: 83 FSFSEGAKKAVEEAGGRCITIKELINENPKG 113
>UniRef50_Q2RY86 Cluster: Alpha-2-macroglobulin-like protein
precursor; n=1; Rhodospirillum rubrum ATCC 11170|Rep:
Alpha-2-macroglobulin-like protein precursor -
Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)
Length = 1759
Score = 35.9 bits (79), Expect = 0.70
Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 4/125 (3%)
Frame = +2
Query: 212 INRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILA 391
+ P ++++ L R + P ++V + + ++T+ + AL V E RA LA
Sbjct: 1141 VRDPMVAMATLPRFLA-PGDRSFLSVSLDNIDGPAGVWTLAAVGEGALSVPEGPRAVDLA 1199
Query: 392 AGGEILTFDQLALRA----PTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTNG 559
GG L +LA+ P + + RE F PGAPR + G
Sbjct: 1200 KGGRDLV--RLAVEGLNPGPGTLRLAITAPTGERREKTWSFDVRPGAPRMTLAHRLDLGG 1257
Query: 560 HEHAR 574
H AR
Sbjct: 1258 HGRAR 1262
>UniRef50_Q3JMF5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 740
Score = 35.1 bits (77), Expect = 1.2
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +2
Query: 425 ALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTNGHEHARPSRR 586
A RAP G L+ R AR + R P P PR+ T+P+ AR SRR
Sbjct: 668 ATRAPFGACAALIARARGARRSRRARAP-PRTPRTATRPHAARRRGRRARRSRR 720
>UniRef50_A0CQ05 Cluster: Chromosome undetermined scaffold_237,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_237,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 978
Score = 34.7 bits (76), Expect = 1.6
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -1
Query: 523 RCTRRRPEVTNCLTSITATLN-QYCLTSS 440
RC ++ P + NC+TS+T N + CLTSS
Sbjct: 728 RCIKKAPSIKNCVTSVTKISNIEICLTSS 756
>UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L18E -
uncultured organism HF70_19B12
Length = 121
Score = 33.9 bits (74), Expect = 2.8
Identities = 31/96 (32%), Positives = 47/96 (48%)
Frame = +2
Query: 161 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 340
T A + + RL SR N +LSRL+R + + ++G S DV +
Sbjct: 26 TGAALWRDVALRLETSRSNWAEPNLSRLSRTAGEDETILVPGKLLG--SGDV----IGSP 79
Query: 341 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGR 448
+VAA V+ AR++I AAGG ++T L P G+
Sbjct: 80 SVAAYSVSAGARSKIEAAGGRVMTIRDLMNDNPNGK 115
>UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12;
Archaea|Rep: 50S ribosomal protein L18e - Methanopyrus
kandleri
Length = 127
Score = 33.9 bits (74), Expect = 2.8
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +2
Query: 164 NAKFNQIILRRLFMSRINRPPISLSRLARHMKKPT-REGLIAVVVGTVSNDVRLYTVPKM 340
NA + + RL R R +++ +L ++ +E +V G V D + T P +
Sbjct: 28 NAPVWRDVAERLSRPRRQRAEVNVGKLDGLARRGVIQEEETVLVPGKVLGD-GVITQP-L 85
Query: 341 TVAALHVTEKARARILAAGGEILTFDQLALRAPTG 445
VAA + AR +I AAGGE LT +L P G
Sbjct: 86 RVAAWRFSRTARMKIEAAGGECLTIRELLEENPEG 120
>UniRef50_Q1DDG8 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 410
Score = 33.5 bits (73), Expect = 3.7
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = -2
Query: 531 CERGAPGAGPK*RTASRALRRP*TSTVLRPVGARRANWSNVRISPPAAKM 382
C R PGAGP+ + RRP L P+GA RA + P A M
Sbjct: 145 CGRRGPGAGPRGALGAAGRRRPARGRGLSPLGAGRAGGAGGAALPRARGM 194
>UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L15 -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 121
Score = 33.5 bits (73), Expect = 3.7
Identities = 27/94 (28%), Positives = 45/94 (47%)
Frame = +2
Query: 164 NAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMT 343
NA + + RL S ++LS +AR+ +V G V ++ L K+
Sbjct: 27 NAAIWKDVANRLGRSNRRTAEVNLSDIARYANADET----VLVPGKVLSNGDL--TEKVN 80
Query: 344 VAALHVTEKARARILAAGGEILTFDQLALRAPTG 445
VAA ++KA+ +I +AGGE ++ D + P G
Sbjct: 81 VAAFKFSQKAQEKIESAGGECVSIDDIMESNPKG 114
>UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S ribosomal
protein L18; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L18 - Rattus norvegicus
Length = 112
Score = 33.1 bits (72), Expect = 4.9
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 242 LARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAAL 355
+ + MK P E AVVVG V++DVR+ V ++ V AL
Sbjct: 1 MIQKMKLPGWENKTAVVVGMVTDDVRILEVHRLKVCAL 38
>UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse
transcriptase,RNaseH; n=6; Volvox carteri|Rep:
Gag,protease,endonuclease, reverse transcriptase,RNaseH -
Volvox carteri
Length = 1462
Score = 32.7 bits (71), Expect = 6.5
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = +2
Query: 170 KFNQIILRRLFMSRINRPPI--SLSRLARHMKKPTRE------GLIAVVVGTVSNDVRLY 325
+F ++I L++S RP I S+ LARHM KPT E G++ + GT + +
Sbjct: 1244 RFGELIGSLLYLSVGTRPDIAYSVGALARHMSKPTVEHWQAAKGVVRYIAGTAG--LGIV 1301
Query: 326 TVPKMTVAALH 358
PK + +LH
Sbjct: 1302 FSPKSSNPSLH 1312
>UniRef50_Q2GZD3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 2471
Score = 32.7 bits (71), Expect = 6.5
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 266 TREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARIL 388
TRE + A VV + + Y VPK T+A+ TEKA ++L
Sbjct: 442 TREDISAAVVVCRDDQLMAYCVPKATIASAGKTEKALDQVL 482
>UniRef50_Q8PW46 Cluster: 50S ribosomal protein L18e; n=16;
Euryarchaeota|Rep: 50S ribosomal protein L18e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 126
Score = 32.7 bits (71), Expect = 6.5
Identities = 27/87 (31%), Positives = 44/87 (50%)
Frame = +2
Query: 185 ILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVT 364
I +RL N +++S++ RH T E + +V G V L P +TVAA+ +
Sbjct: 39 IAKRLEAPSRNYAAVNISKINRH----TAENDVLLVPGKVLG-AGLLDHP-VTVAAVTFS 92
Query: 365 EKARARILAAGGEILTFDQLALRAPTG 445
E A +I AGG+ L+ +++ P G
Sbjct: 93 ESAVEKITEAGGKCLSVEEIMEANPKG 119
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,790,881
Number of Sequences: 1657284
Number of extensions: 12069341
Number of successful extensions: 33246
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 32098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33216
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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