Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_F05
         (589 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   1.1  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   3.3  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   4.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.7  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 44  KMGIDINHKHDRKV 85
           K+G++INHK D +V
Sbjct: 406 KLGLEINHKEDFRV 419


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 272 EGLIAVVVGTVSNDVRLYTV 331
           + ++A+V+GT+ N    YTV
Sbjct: 62  KSIVAMVMGTIVNAFSCYTV 81


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 512 APARSDELPHEHYGDPEP 459
           A  +SDE+P E    PEP
Sbjct: 384 AALKSDEIPPEPVPTPEP 401


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 491 VRHFGPAPGAPRSHTKPYVRTNGHEHARPSRRS 589
           +RH G    +P +H + Y     +  A P+R S
Sbjct: 70  IRHHGQWNYSPDNHFEQYPNPTYYNLADPARDS 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,002
Number of Sequences: 336
Number of extensions: 2879
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)