Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_F04
(525 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119638-1|AAM50292.1| 494|Drosophila melanogaster RE43246p pro... 141 6e-34
AE014296-1964|AAO41255.1| 494|Drosophila melanogaster CG6128-PB... 141 6e-34
AE014296-1963|AAF50054.2| 494|Drosophila melanogaster CG6128-PA... 141 6e-34
AY060368-1|AAL25407.1| 367|Drosophila melanogaster LD22570p pro... 29 2.9
AF172257-1|AAF87943.1| 367|Drosophila melanogaster innexin 2 pr... 29 2.9
AF137269-1|AAD50378.1| 367|Drosophila melanogaster gap junction... 29 2.9
AE014298-988|AAN09193.1| 367|Drosophila melanogaster CG4590-PB,... 29 2.9
AE014298-987|AAF46229.1| 367|Drosophila melanogaster CG4590-PA,... 29 2.9
U17330-1|AAC46584.1| 372|Drosophila melanogaster passover-vital... 28 8.9
S78495-1|AAB34769.1| 372|Drosophila melanogaster Shak-B (lethal... 28 8.9
L13306-1|AAA28745.1| 361|Drosophila melanogaster passover protein. 28 8.9
BT025062-1|ABE73233.1| 532|Drosophila melanogaster IP15640p pro... 28 8.9
AE014298-3050|AAF50883.1| 372|Drosophila melanogaster CG32508-P... 28 8.9
AE014298-3049|AAF50882.2| 361|Drosophila melanogaster CG32508-P... 28 8.9
>AY119638-1|AAM50292.1| 494|Drosophila melanogaster RE43246p
protein.
Length = 494
Score = 141 bits (341), Expect = 6e-34
Identities = 57/96 (59%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Frame = +3
Query: 240 KFNPDWKDLDTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKG-GSLKYTLFMDK 416
++ P+W LD R LP+WYD AK+GIFLH+GVYSVPS+GSEWFW+NWK + +Y FM +
Sbjct: 33 RYQPNWASLDQRPLPQWYDDAKVGIFLHYGVYSVPSFGSEWFWTNWKNLRNPEYVQFMQR 92
Query: 417 NYPPGFSYQEFAPMFTAEFFDPQQWAQLFSKAGAKY 524
NY P F+YQEFA FTAE F+ +WA LF +GA+Y
Sbjct: 93 NYKPDFTYQEFASQFTAELFNATKWALLFKDSGARY 128
>AE014296-1964|AAO41255.1| 494|Drosophila melanogaster CG6128-PB,
isoform B protein.
Length = 494
Score = 141 bits (341), Expect = 6e-34
Identities = 57/96 (59%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Frame = +3
Query: 240 KFNPDWKDLDTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKG-GSLKYTLFMDK 416
++ P+W LD R LP+WYD AK+GIFLH+GVYSVPS+GSEWFW+NWK + +Y FM +
Sbjct: 33 RYQPNWASLDQRPLPQWYDDAKVGIFLHYGVYSVPSFGSEWFWTNWKNLRNPEYVQFMQR 92
Query: 417 NYPPGFSYQEFAPMFTAEFFDPQQWAQLFSKAGAKY 524
NY P F+YQEFA FTAE F+ +WA LF +GA+Y
Sbjct: 93 NYKPDFTYQEFASQFTAELFNATKWALLFKDSGARY 128
>AE014296-1963|AAF50054.2| 494|Drosophila melanogaster CG6128-PA,
isoform A protein.
Length = 494
Score = 141 bits (341), Expect = 6e-34
Identities = 57/96 (59%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Frame = +3
Query: 240 KFNPDWKDLDTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKG-GSLKYTLFMDK 416
++ P+W LD R LP+WYD AK+GIFLH+GVYSVPS+GSEWFW+NWK + +Y FM +
Sbjct: 33 RYQPNWASLDQRPLPQWYDDAKVGIFLHYGVYSVPSFGSEWFWTNWKNLRNPEYVQFMQR 92
Query: 417 NYPPGFSYQEFAPMFTAEFFDPQQWAQLFSKAGAKY 524
NY P F+YQEFA FTAE F+ +WA LF +GA+Y
Sbjct: 93 NYKPDFTYQEFASQFTAELFNATKWALLFKDSGARY 128
>AY060368-1|AAL25407.1| 367|Drosophila melanogaster LD22570p
protein.
Length = 367
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 267 DTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKGGSLKYTLFMDKNYP 425
D K ++Y +F ++ VP Y W +W+GG LK L MD N P
Sbjct: 101 DEVKYHKYYQWVCFVLFFQAILFYVPRY----LWKSWEGGRLK-MLVMDLNSP 148
>AF172257-1|AAF87943.1| 367|Drosophila melanogaster innexin 2
protein.
Length = 367
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 267 DTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKGGSLKYTLFMDKNYP 425
D K ++Y +F ++ VP Y W +W+GG LK L MD N P
Sbjct: 101 DEVKYHKYYQWVCFVLFFQAILFYVPRY----LWKSWEGGRLK-MLVMDLNSP 148
>AF137269-1|AAD50378.1| 367|Drosophila melanogaster gap junction
protein prp33 protein.
Length = 367
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 267 DTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKGGSLKYTLFMDKNYP 425
D K ++Y +F ++ VP Y W +W+GG LK L MD N P
Sbjct: 101 DEVKYHKYYQWVCFVLFFQAILFYVPRY----LWKSWEGGRLK-MLVMDLNSP 148
>AE014298-988|AAN09193.1| 367|Drosophila melanogaster CG4590-PB,
isoform B protein.
Length = 367
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 267 DTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKGGSLKYTLFMDKNYP 425
D K ++Y +F ++ VP Y W +W+GG LK L MD N P
Sbjct: 101 DEVKYHKYYQWVCFVLFFQAILFYVPRY----LWKSWEGGRLK-MLVMDLNSP 148
>AE014298-987|AAF46229.1| 367|Drosophila melanogaster CG4590-PA,
isoform A protein.
Length = 367
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 267 DTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKGGSLKYTLFMDKNYP 425
D K ++Y +F ++ VP Y W +W+GG LK L MD N P
Sbjct: 101 DEVKYHKYYQWVCFVLFFQAILFYVPRY----LWKSWEGGRLK-MLVMDLNSP 148
>U17330-1|AAC46584.1| 372|Drosophila melanogaster passover-vital
protein protein.
Length = 372
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 348 YGSEWFWSNWKGGSLKYTLFMD 413
Y W W +W+GG + + L MD
Sbjct: 125 YTPRWLWKSWEGGKI-HALIMD 145
>S78495-1|AAB34769.1| 372|Drosophila melanogaster Shak-B (lethal)
protein protein.
Length = 372
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 348 YGSEWFWSNWKGGSLKYTLFMD 413
Y W W +W+GG + + L MD
Sbjct: 125 YTPRWLWKSWEGGKI-HALIMD 145
>L13306-1|AAA28745.1| 361|Drosophila melanogaster passover protein.
Length = 361
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 348 YGSEWFWSNWKGGSLKYTLFMD 413
Y W W +W+GG + + L MD
Sbjct: 114 YTPRWLWKSWEGGKI-HALIMD 134
>BT025062-1|ABE73233.1| 532|Drosophila melanogaster IP15640p
protein.
Length = 532
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 348 YGSEWFWSNWKGGSLKYTLFMD 413
Y W W +W+GG + + L MD
Sbjct: 285 YTPRWLWKSWEGGKI-HALIMD 305
>AE014298-3050|AAF50883.1| 372|Drosophila melanogaster CG32508-PA,
isoform A protein.
Length = 372
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 348 YGSEWFWSNWKGGSLKYTLFMD 413
Y W W +W+GG + + L MD
Sbjct: 125 YTPRWLWKSWEGGKI-HALIMD 145
>AE014298-3049|AAF50882.2| 361|Drosophila melanogaster CG32508-PC,
isoform C protein.
Length = 361
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 348 YGSEWFWSNWKGGSLKYTLFMD 413
Y W W +W+GG + + L MD
Sbjct: 114 YTPRWLWKSWEGGKI-HALIMD 134
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,382,801
Number of Sequences: 53049
Number of extensions: 463405
Number of successful extensions: 1054
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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