Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_F03
         (463 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   3.0  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   6.9  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   6.9  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +1

Query: 151 HECKLCLLFPNCIFDCDQTFVCRMQC 228
           HEC+   LF    +D   TF C   C
Sbjct: 703 HECRNLKLFEGDPYDNATTFTCVSNC 728


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 9/41 (21%), Positives = 21/41 (51%)
 Frame = -3

Query: 194 SKIQFGNSKHSLHSCITYITVILYCKNIKIFLVCYRYCLET 72
           S+ +  NS+  +   +  ++ +  C N+  ++V  +  LET
Sbjct: 360 SRSRVANSQIKVTKMLLIVSTVFVCLNLPSYIVRVKIYLET 400


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -1

Query: 190 KYSLGIANIVYIHVLLTLL*YYIVKI 113
           KY +  A ++ + VLL L+ YY++ +
Sbjct: 657 KYIVSPAAVIPLLVLLILIIYYLISL 682


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,000
Number of Sequences: 2352
Number of extensions: 7258
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39969834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)