Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_F03
         (463 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M12927-3|AAA70220.1|  479|Drosophila melanogaster unknown protei...    28   5.3  
EF591043-3|ABQ84945.1|  479|Drosophila melanogaster env protein.       28   5.3  
EF591042-3|ABQ84941.1|  479|Drosophila melanogaster env protein.       28   5.3  
DQ887187-3|ABI48307.1|  479|Drosophila melanogaster env protein ...    28   5.3  
DQ887186-3|ABI48304.1|  479|Drosophila melanogaster env protein ...    28   5.3  
AF033821-1|AAC82605.1|  483|Drosophila melanogaster gp54-SU prot...    28   5.3  

>M12927-3|AAA70220.1|  479|Drosophila melanogaster unknown protein
           protein.
          Length = 479

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = -3

Query: 194 SKIQFGNSKHSLHSCITYITVILYCKNIKIFLVCYRYCL 78
           SKI+   S++S+H  I Y  V   CK + ++ V +++ +
Sbjct: 222 SKIRVLQSENSIHILIAYPRVKFSCKKVAVYPVSHQHTI 260


>EF591043-3|ABQ84945.1|  479|Drosophila melanogaster env protein.
          Length = 479

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = -3

Query: 194 SKIQFGNSKHSLHSCITYITVILYCKNIKIFLVCYRYCL 78
           SKI+   S++S+H  I Y  V   CK + ++ V +++ +
Sbjct: 222 SKIRVLQSENSIHILIAYPRVKFSCKKVAVYPVSHQHTI 260


>EF591042-3|ABQ84941.1|  479|Drosophila melanogaster env protein.
          Length = 479

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = -3

Query: 194 SKIQFGNSKHSLHSCITYITVILYCKNIKIFLVCYRYCL 78
           SKI+   S++S+H  I Y  V   CK + ++ V +++ +
Sbjct: 222 SKIRVLQSENSIHILIAYPRVKFSCKKVAVYPVSHQHTI 260


>DQ887187-3|ABI48307.1|  479|Drosophila melanogaster env protein
           protein.
          Length = 479

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = -3

Query: 194 SKIQFGNSKHSLHSCITYITVILYCKNIKIFLVCYRYCL 78
           SKI+   S++S+H  I Y  V   CK + ++ V +++ +
Sbjct: 222 SKIRVLQSENSIHILIAYPRVKFSCKKVAVYPVSHQHTI 260


>DQ887186-3|ABI48304.1|  479|Drosophila melanogaster env protein
           protein.
          Length = 479

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = -3

Query: 194 SKIQFGNSKHSLHSCITYITVILYCKNIKIFLVCYRYCL 78
           SKI+   S++S+H  I Y  V   CK + ++ V +++ +
Sbjct: 222 SKIRVLQSENSIHILIAYPRVKFSCKKVAVYPVSHQHTI 260


>AF033821-1|AAC82605.1|  483|Drosophila melanogaster gp54-SU
           protein.
          Length = 483

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = -3

Query: 194 SKIQFGNSKHSLHSCITYITVILYCKNIKIFLVCYRYCL 78
           SKI+   S++S+H  I Y  V   CK + ++ V +++ +
Sbjct: 226 SKIRVLQSENSIHILIAYPRVKFSCKKVAVYPVSHQHTI 264


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,131,740
Number of Sequences: 53049
Number of extensions: 250366
Number of successful extensions: 495
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)