Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_F01
(315 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P25398 Cluster: 40S ribosomal protein S12; n=129; Eukar... 118 2e-26
UniRef50_Q201W7 Cluster: 40S ribosomal protein S12; n=1; Acyrtho... 111 2e-24
UniRef50_Q9SKZ3 Cluster: 40S ribosomal protein S12-2; n=3; Magno... 108 3e-23
UniRef50_Q5DE28 Cluster: 40S ribosomal protein S12; n=2; Platyhe... 106 8e-23
UniRef50_A2YI73 Cluster: 40S ribosomal protein S12; n=5; Oryza s... 96 1e-19
UniRef50_Q5B5V7 Cluster: 40S ribosomal protein S12; n=1; Emerice... 67 2e-19
UniRef50_Q54PX9 Cluster: 40S ribosomal protein S12; n=1; Dictyos... 95 2e-19
UniRef50_Q5CFW0 Cluster: 40S ribosomal protein S12; n=4; Apicomp... 87 9e-17
UniRef50_Q03253 Cluster: 40S ribosomal protein S12; n=10; Trypan... 83 2e-15
UniRef50_O97249 Cluster: 40S ribosomal protein S12; n=5; Plasmod... 82 3e-15
UniRef50_UPI0000D633F9 Cluster: UPI0000D633F9 related cluster; n... 79 2e-14
UniRef50_P48589 Cluster: 40S ribosomal protein S12; n=13; Saccha... 78 3e-14
UniRef50_A7AM93 Cluster: 40S ribosomal protein S12, putative; n=... 72 3e-12
UniRef50_UPI00004982F0 Cluster: 40S ribosomal protein S12; n=3; ... 56 2e-07
UniRef50_Q22W26 Cluster: 40S ribosomal protein S12; n=1; Tetrahy... 54 8e-07
UniRef50_A0EEB1 Cluster: 40S ribosomal protein S12; n=7; Paramec... 54 8e-07
UniRef50_A2E257 Cluster: Ribosomal protein L7Ae, putative; n=5; ... 45 3e-04
UniRef50_Q7R1B2 Cluster: GLP_306_61647_62024; n=1; Giardia lambl... 42 0.003
UniRef50_Q8SSK9 Cluster: 40S RIBOSOMAL PROTEIN S12; n=1; Encepha... 38 0.033
UniRef50_Q017M6 Cluster: Homology to unknown gene; n=1; Ostreoco... 38 0.043
UniRef50_UPI0000D56A00 Cluster: PREDICTED: similar to CG11086-PA... 38 0.057
UniRef50_Q3LWI8 Cluster: Ribosomal protein S12; n=1; Bigelowiell... 38 0.057
UniRef50_A7T0U1 Cluster: Predicted protein; n=1; Nematostella ve... 34 0.71
UniRef50_A0C845 Cluster: Chromosome undetermined scaffold_157, w... 32 2.9
UniRef50_Q3A9Q9 Cluster: Ribosomal protein L7ae family protein; ... 31 3.8
UniRef50_A0UZZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 31 3.8
UniRef50_Q7QJT5 Cluster: ENSANGP00000021535; n=2; Culicidae|Rep:... 31 3.8
UniRef50_Q4Q489 Cluster: Putative uncharacterized protein; n=3; ... 31 3.8
UniRef50_Q1E2C7 Cluster: Putative uncharacterized protein; n=1; ... 31 3.8
UniRef50_Q9ZVR1 Cluster: F-box protein PP2-B5; n=1; Arabidopsis ... 31 5.0
UniRef50_Q4FVK5 Cluster: Putative uncharacterized protein; n=3; ... 31 6.6
UniRef50_A6BZ59 Cluster: Putative uncharacterized protein; n=1; ... 31 6.6
UniRef50_A6T0E2 Cluster: Hemolysin-like protein; n=40; Betaprote... 30 8.7
UniRef50_A1SQY3 Cluster: Rhs element Vgr protein; n=1; Psychromo... 30 8.7
>UniRef50_P25398 Cluster: 40S ribosomal protein S12; n=129;
Eukaryota|Rep: 40S ribosomal protein S12 - Homo sapiens
(Human)
Length = 132
Score = 118 bits (285), Expect = 2e-26
Identities = 50/77 (64%), Positives = 63/77 (81%)
Frame = +1
Query: 1 ARGCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 180
A CDE Y KLV+AL EHQI L+KVD+NKKLGEW GLCKID++G RK+VGCSCVV+K
Sbjct: 53 ASNCDEPMYVKLVEALLAEHQINLIKVDDNKKLGEWVGLCKIDREGNPRKVVGCSCVVVK 112
Query: 181 DFGEETPALDVLKDYLK 231
D+G+E+ A DV+++Y K
Sbjct: 113 DYGKESQAKDVIEEYFK 129
>UniRef50_Q201W7 Cluster: 40S ribosomal protein S12; n=1;
Acyrthosiphon pisum|Rep: 40S ribosomal protein S12 -
Acyrthosiphon pisum (Pea aphid)
Length = 136
Score = 111 bits (268), Expect = 2e-24
Identities = 47/77 (61%), Positives = 60/77 (77%)
Frame = +1
Query: 1 ARGCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 180
A C+EA YKKLV LC E+ PL++VD+NK LGEW+GLCK D +G+ARK+VGCSCVV+K
Sbjct: 55 ANNCEEAMYKKLVTGLCAENSTPLIEVDSNKTLGEWSGLCKYDNNGQARKVVGCSCVVVK 114
Query: 181 DFGEETPALDVLKDYLK 231
FG++T LD L + LK
Sbjct: 115 HFGDDTQELDTLLEILK 131
>UniRef50_Q9SKZ3 Cluster: 40S ribosomal protein S12-2; n=3;
Magnoliophyta|Rep: 40S ribosomal protein S12-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 108 bits (259), Expect = 3e-23
Identities = 47/76 (61%), Positives = 60/76 (78%)
Frame = +1
Query: 1 ARGCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 180
A C++ Y KLV+ALC +H I L+ V + K LGEWAGLCKID +G ARK+VGCSC+VIK
Sbjct: 66 AEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVIK 125
Query: 181 DFGEETPALDVLKDYL 228
DFGEET AL+++K +L
Sbjct: 126 DFGEETTALNIVKKHL 141
>UniRef50_Q5DE28 Cluster: 40S ribosomal protein S12; n=2;
Platyhelminthes|Rep: 40S ribosomal protein S12 -
Schistosoma japonicum (Blood fluke)
Length = 131
Score = 106 bits (255), Expect = 8e-23
Identities = 46/72 (63%), Positives = 56/72 (77%)
Frame = +1
Query: 1 ARGCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 180
A C+E AY L++ALCNEH IPLVKV +NKKLGEW+GLCK DK+GKARK+V SC+V+
Sbjct: 47 ADNCNEKAYTTLIEALCNEHGIPLVKVPDNKKLGEWSGLCKYDKEGKARKVVSASCIVVT 106
Query: 181 DFGEETPALDVL 216
D GEE+ L L
Sbjct: 107 DIGEESYGLKYL 118
>UniRef50_A2YI73 Cluster: 40S ribosomal protein S12; n=5; Oryza
sativa|Rep: 40S ribosomal protein S12 - Oryza sativa
subsp. indica (Rice)
Length = 156
Score = 96.3 bits (229), Expect = 1e-19
Identities = 48/95 (50%), Positives = 62/95 (65%), Gaps = 18/95 (18%)
Frame = +1
Query: 1 ARGCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGL------------------CKI 126
A CD+ Y KLV+ALC EH + LV V + K LGEWAGL CKI
Sbjct: 60 AEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLYEKPSCPGFNNTYCHSQLCKI 119
Query: 127 DKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 231
D +GKARK+VGCSCVV+KD+GEE+ L++++DY+K
Sbjct: 120 DSEGKARKVVGCSCVVVKDYGEESEGLNIVQDYVK 154
>UniRef50_Q5B5V7 Cluster: 40S ribosomal protein S12; n=1; Emericella
nidulans|Rep: 40S ribosomal protein S12 - Emericella
nidulans (Aspergillus nidulans)
Length = 183
Score = 66.9 bits (156), Expect(2) = 2e-19
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +1
Query: 7 GCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLC 120
GC+E AYKKLV ALC+EH+IPL+KV + K LGEW GLC
Sbjct: 73 GCEEEAYKKLVVALCSEHKIPLIKVPDGKMLGEWVGLC 110
Score = 49.6 bits (113), Expect(2) = 2e-19
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +1
Query: 121 KIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 231
++D++G ARK+V CSCVV+KD+GEE+ VL +Y +
Sbjct: 144 QLDREGNARKVVNCSCVVVKDWGEESQERSVLLNYFQ 180
>UniRef50_Q54PX9 Cluster: 40S ribosomal protein S12; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S12 - Dictyostelium discoideum AX4
Length = 136
Score = 95.5 bits (227), Expect = 2e-19
Identities = 42/76 (55%), Positives = 55/76 (72%)
Frame = +1
Query: 1 ARGCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 180
A CDE + +LV+AL EH IPL++V +NK LGEWAGLCK+DKD ARK+V CS +VIK
Sbjct: 58 ASNCDEPNFVRLVKALATEHNIPLIEVPDNKALGEWAGLCKLDKDLAARKVVACSTLVIK 117
Query: 181 DFGEETPALDVLKDYL 228
FG+E+ L +Y+
Sbjct: 118 TFGKESDDYKFLMEYI 133
>UniRef50_Q5CFW0 Cluster: 40S ribosomal protein S12; n=4;
Apicomplexa|Rep: 40S ribosomal protein S12 -
Cryptosporidium hominis
Length = 143
Score = 86.6 bits (205), Expect = 9e-17
Identities = 37/76 (48%), Positives = 54/76 (71%)
Frame = +1
Query: 1 ARGCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 180
A C+E YK+LV+ALC E IPL+ V ++K+LGE AGLCK+D++G RK+VG + V I
Sbjct: 62 AESCEEDCYKQLVEALCRERGIPLIMVPDSKELGEMAGLCKVDREGNPRKVVGAASVAIV 121
Query: 181 DFGEETPALDVLKDYL 228
D+G E+ A L+ ++
Sbjct: 122 DYGVESEAYHYLQKHI 137
>UniRef50_Q03253 Cluster: 40S ribosomal protein S12; n=10;
Trypanosomatidae|Rep: 40S ribosomal protein S12 -
Trypanosoma brucei brucei
Length = 144
Score = 82.6 bits (195), Expect = 2e-15
Identities = 36/77 (46%), Positives = 50/77 (64%)
Frame = +1
Query: 1 ARGCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 180
A C++ YKKLV AL ++ I LV +D +KL +WAGL ++ DG RK + CSC+ ++
Sbjct: 68 ADDCEDEEYKKLVTALAKQNNIDLVSMDEREKLAQWAGLTRMAADGSVRKTLKCSCLAVR 127
Query: 181 DFGEETPALDVLKDYLK 231
DFGE T ALD L L+
Sbjct: 128 DFGERTKALDYLLSQLQ 144
>UniRef50_O97249 Cluster: 40S ribosomal protein S12; n=5;
Plasmodium|Rep: 40S ribosomal protein S12 - Plasmodium
falciparum (isolate 3D7)
Length = 141
Score = 81.8 bits (193), Expect = 3e-15
Identities = 38/70 (54%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +1
Query: 10 CDEAAYKKLVQALCNEHQIPLVKVDNNKK-LGEWAGLCKIDKDGKARKIVGCSCVVIKDF 186
C E AYKKL+ LC E IPL V N+ K LG WAGL K+D +G ARKI+G S V + DF
Sbjct: 63 CSEPAYKKLITTLCAEKNIPLFMVQNDSKDLGHWAGLFKLDNEGNARKIIGASSVAVVDF 122
Query: 187 GEETPALDVL 216
GE++ D L
Sbjct: 123 GEDSAEKDFL 132
>UniRef50_UPI0000D633F9 Cluster: UPI0000D633F9 related cluster; n=1;
Mus musculus|Rep: UPI0000D633F9 UniRef100 entry - Mus
musculus
Length = 132
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/74 (45%), Positives = 51/74 (68%)
Frame = +1
Query: 10 CDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFG 189
C+E Y KLV+A C EHQI L+K D+ + L EW + D++GK+ K+V C+ VV+K +G
Sbjct: 56 CNEPMYVKLVKAHCAEHQISLIKDDDKRNLREWGRPLQTDQEGKSNKVVVCNSVVVKGYG 115
Query: 190 EETPALDVLKDYLK 231
+E+ A D +K+Y K
Sbjct: 116 KESQAKDDIKEYFK 129
>UniRef50_P48589 Cluster: 40S ribosomal protein S12; n=13;
Saccharomycetales|Rep: 40S ribosomal protein S12 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 143
Score = 78.2 bits (184), Expect = 3e-14
Identities = 37/72 (51%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Frame = +1
Query: 16 EAAYKKLVQALCN--EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFG 189
EA KLV+ L N E+++PL+KV + K+LGEWAGL KID++G ARK+VG S VV+K++G
Sbjct: 68 EANIIKLVEGLANDPENKVPLIKVADAKQLGEWAGLGKIDREGNARKVVGASVVVVKNWG 127
Query: 190 EETPALDVLKDY 225
ET L ++ ++
Sbjct: 128 AETDELSMIMEH 139
>UniRef50_A7AM93 Cluster: 40S ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S12, putative -
Babesia bovis
Length = 167
Score = 71.7 bits (168), Expect = 3e-12
Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = +1
Query: 16 EAAYKKLVQALCNEHQIPLVKVD-NNKKLGEWAGLCKIDKDGKARKIVGCSCVVI-KDFG 189
E AY KL++ALC EH +P ++ + +++K+GEWAGLCK D +G ARKIVG + V I +F
Sbjct: 91 EEAYLKLIRALCKEHGVPCIETEFDSEKIGEWAGLCKYDIEGVARKIVGATSVAITNNFD 150
Query: 190 EETPALDVLKDYLK 231
E++ + + + +K
Sbjct: 151 EKSESAEEMISLIK 164
>UniRef50_UPI00004982F0 Cluster: 40S ribosomal protein S12; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S12 - Entamoeba histolytica HM-1:IMSS
Length = 136
Score = 55.6 bits (128), Expect = 2e-07
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +1
Query: 1 ARGCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVI 177
A CD Y L++A+C E + +V V +LGEW CKI +DG A +I CSC ++
Sbjct: 61 AEDCDNDKYTGLLKAICKEQGVKIVMVPQKIQLGEWTNQCKI-RDGAAVRIAKCSCAIV 118
>UniRef50_Q22W26 Cluster: 40S ribosomal protein S12; n=1;
Tetrahymena thermophila SB210|Rep: 40S ribosomal protein
S12 - Tetrahymena thermophila SB210
Length = 126
Score = 53.6 bits (123), Expect = 8e-07
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +1
Query: 1 ARGCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 180
A CD+ Y KLV+ALC +++I V V LGE+ G + G+ +K+ GCS + I+
Sbjct: 47 AEDCDQGNYVKLVKALCAKNEIKYVSVPKRASLGEYLGHFTANAKGEIKKVKGCSSLAIR 106
Query: 181 DFGEE 195
+ E
Sbjct: 107 KYAPE 111
>UniRef50_A0EEB1 Cluster: 40S ribosomal protein S12; n=7; Paramecium
tetraurelia|Rep: 40S ribosomal protein S12 - Paramecium
tetraurelia
Length = 129
Score = 53.6 bits (123), Expect = 8e-07
Identities = 28/65 (43%), Positives = 34/65 (52%)
Frame = +1
Query: 1 ARGCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 180
A C E YKKL+ AL + QIP+ KV+ LGEW G+ K K K CS V +K
Sbjct: 49 ADDCTEDTYKKLIVALAKQFQIPVWKVEKGALLGEWIGISKFLTKTKKIKSRKCSSVALK 108
Query: 181 DFGEE 195
F E
Sbjct: 109 HFAIE 113
>UniRef50_A2E257 Cluster: Ribosomal protein L7Ae, putative; n=5;
Trichomonas vaginalis G3|Rep: Ribosomal protein L7Ae,
putative - Trichomonas vaginalis G3
Length = 127
Score = 45.2 bits (102), Expect = 3e-04
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 25 YKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGE-ETP 201
YK LV LC +H + L V+ + LG GL + DG R+ + C I +G+ ET
Sbjct: 55 YKNLVAGLCKKHNVKLQAVEKKELLGRALGLTHLKADGSVRRQMNCGACAIIGYGKVETE 114
Query: 202 ALDVLK 219
L+ +
Sbjct: 115 ELNAFR 120
>UniRef50_Q7R1B2 Cluster: GLP_306_61647_62024; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_306_61647_62024 - Giardia lamblia
ATCC 50803
Length = 125
Score = 41.9 bits (94), Expect = 0.003
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 1 ARGCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG--LCKIDKDGKARKIVGCSCVV 174
A C+E Y +V+ LC E+++ L K + LGE G C D D K K+V S V
Sbjct: 45 ASDCEEKQYADIVECLCKEYKVHLCKKFTRRTLGELTGQVRCLADSD-KIIKVVPASACV 103
Query: 175 IKDF 186
I +F
Sbjct: 104 IHNF 107
>UniRef50_Q8SSK9 Cluster: 40S RIBOSOMAL PROTEIN S12; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S12
- Encephalitozoon cuniculi
Length = 134
Score = 38.3 bits (85), Expect = 0.033
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 16 EAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 195
E KLV AL + IP++ + + +LG G+ + GK R GC ++D+ E+
Sbjct: 58 EPRISKLVMALAKKKNIPVISIGSCLELGRIVGVENVSSSGKVRS-KGCCVAGVQDYCEQ 116
Query: 196 T 198
T
Sbjct: 117 T 117
>UniRef50_Q017M6 Cluster: Homology to unknown gene; n=1;
Ostreococcus tauri|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 473
Score = 37.9 bits (84), Expect = 0.043
Identities = 23/73 (31%), Positives = 39/73 (53%)
Frame = -1
Query: 231 LEVVFEYVQRWRLLTEILDNYARATDDFPSLAVFVDFTETGPFAELLIVIDLNKWDLMFI 52
L+ V ++ +R LTE+ D+ ARA + A V+ +T P E + D N+ + F+
Sbjct: 299 LQEVLKHAERRGFLTEVADHDARALHNLTRGAFGVELAQTSPLTERHRLRDANQVHVDFV 358
Query: 51 TESLNKLFVGCLV 13
+ L++L V LV
Sbjct: 359 AQRLDELGVISLV 371
>UniRef50_UPI0000D56A00 Cluster: PREDICTED: similar to CG11086-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG11086-PA - Tribolium castaneum
Length = 153
Score = 37.5 bits (83), Expect = 0.057
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Frame = +1
Query: 34 LVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVI-KDF-GEETPAL 207
L+QA C E+ IP+++VD+++KL ++ GL G VGC C VI KD ++ P L
Sbjct: 76 LLQAFCFENYIPVIQVDSSEKLAQYCGL------GSR---VGCPCAVITKDMEAQQDPPL 126
>UniRef50_Q3LWI8 Cluster: Ribosomal protein S12; n=1; Bigelowiella
natans|Rep: Ribosomal protein S12 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 110
Score = 37.5 bits (83), Expect = 0.057
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +1
Query: 1 ARGCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGK-ARKIVGCS-CVV 174
A+ C++ YK ++ LC +++ + +++ KKLG + K K K + KI+ CS C++
Sbjct: 42 AKNCNKKQYKIAIKTLCWIYKVKIFIINDKKKLGRLCKILKRKKSTKHSFKIIPCSVCLI 101
Query: 175 IK 180
++
Sbjct: 102 LR 103
>UniRef50_A7T0U1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 148
Score = 33.9 bits (74), Expect = 0.71
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +1
Query: 31 KLVQALCNEHQIPLVKVDNNKKLGEWAG 114
+L++A C E+ IP+VKVD+++KL AG
Sbjct: 80 RLIEAFCWEYPIPVVKVDSSRKLKTIAG 107
>UniRef50_A0C845 Cluster: Chromosome undetermined scaffold_157,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_157,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 779
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 1 ARGCDEAAYKKLVQALCNEHQIPLVKVD 84
A C E YKKLV AL + QIP+ KV+
Sbjct: 68 ADDCSEDTYKKLVIALAKQFQIPVWKVE 95
>UniRef50_Q3A9Q9 Cluster: Ribosomal protein L7ae family protein;
n=2; Clostridia|Rep: Ribosomal protein L7ae family
protein - Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008)
Length = 87
Score = 31.5 bits (68), Expect = 3.8
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 37 VQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 195
V ALC E +P+ VD +LG+ G+ VGC+C I D G+E
Sbjct: 45 VVALCKEKNVPVETVDTMAELGKSCGIA-----------VGCACAAIIDPGKE 86
>UniRef50_A0UZZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Clostridium cellulolyticum H10|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Clostridium
cellulolyticum H10
Length = 80
Score = 31.5 bits (68), Expect = 3.8
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +1
Query: 1 ARGCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGL 117
AR C++ + +++ LC +P+ VD+ K+LG+ G+
Sbjct: 32 ARDCEQRVVRGIIE-LCENKSVPITYVDSMKQLGKACGI 69
>UniRef50_Q7QJT5 Cluster: ENSANGP00000021535; n=2; Culicidae|Rep:
ENSANGP00000021535 - Anopheles gambiae str. PEST
Length = 135
Score = 31.5 bits (68), Expect = 3.8
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 25 YKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKID 129
++ L++A C EH I ++KVD+ +KL G +++
Sbjct: 56 HQVLLEAFCFEHDIYIIKVDSAEKLSRMLGTPRVE 90
>UniRef50_Q4Q489 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 910
Score = 31.5 bits (68), Expect = 3.8
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +2
Query: 11 VTRQPTKSLFRLSVMNIKSHLLRSITIRSSANGPVSVKSTKTARLGKSSVALA*LSRISV 190
V R + S+ R ++ S R RSS N V + S+ R + + A+ SR
Sbjct: 38 VARASSSSVSRAGQGSLSSRRSRHTFSRSSHNPYVLLSSSDVNRPEQEASAMENSSRAVR 97
Query: 191 RRRQRWTYSKTTS 229
RRR ++YS TS
Sbjct: 98 RRRSSYSYSNNTS 110
>UniRef50_Q1E2C7 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 1251
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1
Query: 96 LLIVIDLNKWDLMFITESLNKLFVGCLVT 10
LL+ +++ WD+MF + SLN + GC VT
Sbjct: 579 LLLALEV-PWDIMFGSNSLNSVLTGCTVT 606
>UniRef50_Q9ZVR1 Cluster: F-box protein PP2-B5; n=1; Arabidopsis
thaliana|Rep: F-box protein PP2-B5 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 284
Score = 31.1 bits (67), Expect = 5.0
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = -1
Query: 216 EYVQRWRLLTEILDNYARATDDFPS--LAVFVDFTETGPFAELLIVIDLNKWDLMFITES 43
E+ W +LTE ++ + + DD P LA+ FT T P L + + L F ++S
Sbjct: 15 EFCGCWEILTEFINGSSASFDDLPDDCLAIISSFTST-PRDAFLAALVSKSFGLQFNSDS 73
Query: 42 LNKLFV 25
+ + F+
Sbjct: 74 VWEKFL 79
>UniRef50_Q4FVK5 Cluster: Putative uncharacterized protein; n=3;
Psychrobacter|Rep: Putative uncharacterized protein -
Psychrobacter arcticum
Length = 370
Score = 30.7 bits (66), Expect = 6.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 31 KLVQALCNEHQIPLVKVDNNKKLGEWAGLC 120
K VQ L EH++PLV V + K +G + +C
Sbjct: 197 KSVQELWGEHKMPLVVVGDTKNIGYYKDVC 226
>UniRef50_A6BZ59 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 195
Score = 30.7 bits (66), Expect = 6.6
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 70 LVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLK 219
L K + K+ W G+ +D +GKAR ++ C + DF E +D L+
Sbjct: 131 LAKFLGSDKIENWHGILILDSNGKARWLL-CGSKPLMDFREVLSQIDSLQ 179
>UniRef50_A6T0E2 Cluster: Hemolysin-like protein; n=40;
Betaproteobacteria|Rep: Hemolysin-like protein -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 255
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 106 WAGLCKIDKDGKARKIVGCSCVVIKDFGEETPAL 207
WAGL K K ++GC+ V + D G AL
Sbjct: 134 WAGLAAFMKKEKCEYLIGCASVSLADGGHNAAAL 167
>UniRef50_A1SQY3 Cluster: Rhs element Vgr protein; n=1; Psychromonas
ingrahamii 37|Rep: Rhs element Vgr protein -
Psychromonas ingrahamii (strain 37)
Length = 1041
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Frame = +1
Query: 37 VQALCNEHQ-IP-LVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSC--------VVIKDF 186
V C+ +Q +P +V+ D +KK+ A I+ + KA + C V ++DF
Sbjct: 183 VIVFCDNNQALPSIVQPDQSKKIVFQANSA-INVESKACTVTNIICKRQTLPKKVTLRDF 241
Query: 187 GEETPALDVLKDYL 228
+ETP+LD+ +Y+
Sbjct: 242 NDETPSLDIRGEYI 255
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,103,262
Number of Sequences: 1657284
Number of extensions: 4071614
Number of successful extensions: 12209
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 12062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12206
length of database: 575,637,011
effective HSP length: 81
effective length of database: 441,397,007
effective search space used: 10152131161
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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