Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_E24
(603 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58737-5|ABC71794.1| 1294|Caenorhabditis elegans Trehalose 6-pho... 30 1.1
U58737-4|AAK39395.3| 1331|Caenorhabditis elegans Trehalose 6-pho... 30 1.1
U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical pr... 30 1.1
AJ811573-1|CAH18875.1| 1331|Caenorhabditis elegans putative treh... 30 1.1
AJ512332-1|CAD54506.1| 1331|Caenorhabditis elegans trehalose-6-p... 30 1.1
AC024841-2|AAK68540.1| 300|Caenorhabditis elegans Hypothetical ... 29 3.4
AC024841-1|AAK68541.1| 300|Caenorhabditis elegans Hypothetical ... 29 3.4
>U58737-5|ABC71794.1| 1294|Caenorhabditis elegans Trehalose
6-phosphate synthaseprotein 1, isoform b protein.
Length = 1294
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Frame = +2
Query: 2 HEEVFRVSVSNITITYVPNVESRRFYAQEAKPAPMIADYDYVKKATKDKNVLL--IDVRE 175
H++ ++VSN + S + ++ ++A D V A K KN+ L + V
Sbjct: 284 HDKQRVINVSNAPPVSISRKTSGSWEIKQGSGG-LVACVDPVMSADK-KNIWLSNLGVNM 341
Query: 176 PDELKEHGIIPNSVNIPL------GSVTSVLSSMTEKE 271
+ELKEH NS+ +PL G V VL +KE
Sbjct: 342 QEELKEHSTSTNSLGLPLIKQACAGEVFCVLERNEKKE 379
>U58737-4|AAK39395.3| 1331|Caenorhabditis elegans Trehalose
6-phosphate synthaseprotein 1, isoform a protein.
Length = 1331
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Frame = +2
Query: 2 HEEVFRVSVSNITITYVPNVESRRFYAQEAKPAPMIADYDYVKKATKDKNVLL--IDVRE 175
H++ ++VSN + S + ++ ++A D V A K KN+ L + V
Sbjct: 321 HDKQRVINVSNAPPVSISRKTSGSWEIKQGSGG-LVACVDPVMSADK-KNIWLSNLGVNM 378
Query: 176 PDELKEHGIIPNSVNIPL------GSVTSVLSSMTEKE 271
+ELKEH NS+ +PL G V VL +KE
Sbjct: 379 QEELKEHSTSTNSLGLPLIKQACAGEVFCVLERNEKKE 416
>U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical
protein F55D10.1 protein.
Length = 955
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Frame = +2
Query: 146 KNVL---LIDVREPDELKEHGIIPNSVNI-----PLGSVTSVLSSMTEKEFQQIFNRKKP 301
KNVL +++ + D+LK+ +P +++ PLG T + ++ E NRKK
Sbjct: 510 KNVLESQIVETFQIDQLKDTDRLPYEIHVFVRVPPLGYTTVFVEKGSKPERVHFNNRKKF 569
Query: 302 NPNTEI 319
N N EI
Sbjct: 570 NTNVEI 575
>AJ811573-1|CAH18875.1| 1331|Caenorhabditis elegans putative
trehalose 6-phosphatesynthase protein.
Length = 1331
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Frame = +2
Query: 2 HEEVFRVSVSNITITYVPNVESRRFYAQEAKPAPMIADYDYVKKATKDKNVLL--IDVRE 175
H++ ++VSN + S + ++ ++A D V A K KN+ L + V
Sbjct: 321 HDKQRVINVSNAPPVSISRKTSGSWEIKQGSGG-LVACVDPVMSADK-KNIWLSNLGVNM 378
Query: 176 PDELKEHGIIPNSVNIPL------GSVTSVLSSMTEKE 271
+ELKEH NS+ +PL G V VL +KE
Sbjct: 379 QEELKEHSTSTNSLGLPLIKQACAGEVFCVLERNEKKE 416
>AJ512332-1|CAD54506.1| 1331|Caenorhabditis elegans
trehalose-6-phosphate synthase protein.
Length = 1331
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Frame = +2
Query: 2 HEEVFRVSVSNITITYVPNVESRRFYAQEAKPAPMIADYDYVKKATKDKNVLL--IDVRE 175
H++ ++VSN + S + ++ ++A D V A K KN+ L + V
Sbjct: 321 HDKQRVINVSNAPPVSISRKTSGSWEIKQGSGG-LVACVDPVMSADK-KNIWLSNLGVNM 378
Query: 176 PDELKEHGIIPNSVNIPL------GSVTSVLSSMTEKE 271
+ELKEH NS+ +PL G V VL +KE
Sbjct: 379 QEELKEHSTSTNSLGLPLIKQACAGEVFCVLERNEKKE 416
>AC024841-2|AAK68540.1| 300|Caenorhabditis elegans Hypothetical
protein Y59H11AM.2 protein.
Length = 300
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/82 (19%), Positives = 34/82 (41%)
Frame = +2
Query: 95 PAPMIADYDYVKKATKDKNVLLIDVREPDELKEHGIIPNSVNIPLGSVTSVLSSMTEKEF 274
P +A Y+ +K++ + + + PD E ++++ P+G V + + +
Sbjct: 180 PFDNLASIKYLDARSKEEFIGKVPIGYPDSKAEGVRCKDAIHFPIGEVCAAKGFKKKTDC 239
Query: 275 QQIFNRKKPNPNTEIIFYCMIG 340
Q F K ++ C IG
Sbjct: 240 DQAFAAKGIKVGDTVVIGCGIG 261
>AC024841-1|AAK68541.1| 300|Caenorhabditis elegans Hypothetical
protein Y59H11AM.3 protein.
Length = 300
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/82 (19%), Positives = 34/82 (41%)
Frame = +2
Query: 95 PAPMIADYDYVKKATKDKNVLLIDVREPDELKEHGIIPNSVNIPLGSVTSVLSSMTEKEF 274
P +A Y+ +K++ + + + PD E ++++ P+G V + + +
Sbjct: 180 PFDNLASIKYLDARSKEEFIGKVPIGYPDSKAEGVRCKDAIHFPIGEVCAAKGFKKKTDC 239
Query: 275 QQIFNRKKPNPNTEIIFYCMIG 340
Q F K ++ C IG
Sbjct: 240 DQAFAAKGIKVGDTVVIGCGIG 261
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,544,510
Number of Sequences: 27780
Number of extensions: 285838
Number of successful extensions: 831
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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