Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_E23
         (424 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010118-1|AAQ22587.1|  961|Drosophila melanogaster AT27581p pro...    29   2.6  
AE014296-611|AAS64955.1|  958|Drosophila melanogaster CG11505-PC...    29   2.6  
AE014296-610|AAF47745.1| 1521|Drosophila melanogaster CG11505-PA...    29   2.6  
AE014296-609|AAG22237.2| 1531|Drosophila melanogaster CG11505-PB...    29   2.6  

>BT010118-1|AAQ22587.1|  961|Drosophila melanogaster AT27581p
           protein.
          Length = 961

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 14/59 (23%), Positives = 24/59 (40%)
 Frame = -3

Query: 203 KNRILVLKSVINKRPLERQSFLADITDCPARFPCSYKVNGT**LDHETSSGTNKIDAFL 27
           K  I++L+ + N  PL+    L     CP    C +  N +  +  E+     K   +L
Sbjct: 339 KRCIIILREISNNTPLDDVKALFSNESCPRPISCEFAANNSWYITFESDEDAQKAYKYL 397


>AE014296-611|AAS64955.1|  958|Drosophila melanogaster CG11505-PC,
           isoform C protein.
          Length = 958

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 14/59 (23%), Positives = 24/59 (40%)
 Frame = -3

Query: 203 KNRILVLKSVINKRPLERQSFLADITDCPARFPCSYKVNGT**LDHETSSGTNKIDAFL 27
           K  I++L+ + N  PL+    L     CP    C +  N +  +  E+     K   +L
Sbjct: 336 KRCIIILREISNNTPLDDVKALFSNESCPRPISCEFAANNSWYITFESDEDAQKAYKYL 394


>AE014296-610|AAF47745.1| 1521|Drosophila melanogaster CG11505-PA,
           isoform A protein.
          Length = 1521

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 14/59 (23%), Positives = 24/59 (40%)
 Frame = -3

Query: 203 KNRILVLKSVINKRPLERQSFLADITDCPARFPCSYKVNGT**LDHETSSGTNKIDAFL 27
           K  I++L+ + N  PL+    L     CP    C +  N +  +  E+     K   +L
Sbjct: 336 KRCIIILREISNNTPLDDVKALFSNESCPRPISCEFAANNSWYITFESDEDAQKAYKYL 394


>AE014296-609|AAG22237.2| 1531|Drosophila melanogaster CG11505-PB,
           isoform B protein.
          Length = 1531

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 14/59 (23%), Positives = 24/59 (40%)
 Frame = -3

Query: 203 KNRILVLKSVINKRPLERQSFLADITDCPARFPCSYKVNGT**LDHETSSGTNKIDAFL 27
           K  I++L+ + N  PL+    L     CP    C +  N +  +  E+     K   +L
Sbjct: 346 KRCIIILREISNNTPLDDVKALFSNESCPRPISCEFAANNSWYITFESDEDAQKAYKYL 404


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,650,717
Number of Sequences: 53049
Number of extensions: 329670
Number of successful extensions: 661
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1292733852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)