Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_E23
         (424 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   7.5  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   7.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.5  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 30  KGVNFVGTTGSFVIKLSSAVHLV 98
           K V F GTT   ++   S  H V
Sbjct: 38  KPVPFFGTTKDLILVKKSTAHFV 60


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 275 IMNFLQPMAQL*VLTVGLICH 337
           I NF+  +  L +LT+G++ H
Sbjct: 14  IFNFVFAVCGLGILTLGVLIH 34


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 17  TSSKERRQFCWYHW 58
           T S+ERR F ++ W
Sbjct: 499 TESEERRFFSFHQW 512


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,461
Number of Sequences: 438
Number of extensions: 2272
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)