Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_E22
(306 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 160 2e-40
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 151 7e-38
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 149 4e-37
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 149 4e-37
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 144 1e-35
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 143 2e-35
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 109 3e-25
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 109 3e-25
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 76 4e-15
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 74 2e-14
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 74 2e-14
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 73 5e-14
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 72 9e-14
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 72 9e-14
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 70 3e-13
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 70 4e-13
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 70 4e-13
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 70 4e-13
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 69 5e-13
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 69 5e-13
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 68 1e-12
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 65 8e-12
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 64 2e-11
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 64 2e-11
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 62 7e-11
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 53 5e-08
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 29 0.85
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 28 1.1
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 28 1.1
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 1.5
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a... 28 1.5
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 27 2.0
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 27 2.0
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 27 2.0
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 2.0
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 27 2.0
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 27 2.0
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 27 2.0
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 2.0
U70857-10|AAB09175.1| 385|Caenorhabditis elegans Hypothetical p... 27 2.0
Z83108-2|CAB05510.1| 820|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z71180-7|CAK55177.1| 647|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z71180-5|CAD44114.1| 363|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical pr... 27 2.6
AL021475-8|CAK55192.1| 647|Caenorhabditis elegans Hypothetical ... 27 2.6
AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical ... 27 2.6
AL021475-6|CAD44157.1| 363|Caenorhabditis elegans Hypothetical ... 27 2.6
AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical ... 27 2.6
AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein. 27 2.6
U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical pr... 27 3.4
AL023842-4|CAA19517.2| 229|Caenorhabditis elegans Hypothetical ... 27 3.4
AL117203-21|CAN86632.1| 171|Caenorhabditis elegans Hypothetical... 26 4.5
AL117203-20|CAB55118.1| 244|Caenorhabditis elegans Hypothetical... 26 4.5
AF047652-4|AAC04392.2| 399|Caenorhabditis elegans Hypothetical ... 26 4.5
U56963-7|AAQ01523.1| 526|Caenorhabditis elegans Amino acid tran... 25 7.9
AL117201-2|CAI79268.1| 527|Caenorhabditis elegans Hypothetical ... 25 7.9
AL117201-1|CAB55063.1| 541|Caenorhabditis elegans Hypothetical ... 25 7.9
AF099915-8|AAC68768.2| 231|Caenorhabditis elegans Hypothetical ... 25 7.9
AF036693-8|AAK29793.2| 440|Caenorhabditis elegans Hypothetical ... 25 7.9
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 160 bits (389), Expect = 2e-40
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 260 PRAILVDLEPGTMDS 304
PRA LVDLEPGTMDS
Sbjct: 61 PRACLVDLEPGTMDS 75
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 151 bits (367), Expect = 7e-38
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 260 PRAILVDLEPGTMDS 304
PRA+LVDLEPGTMDS
Sbjct: 61 PRAVLVDLEPGTMDS 75
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 149 bits (361), Expect = 4e-37
Identities = 66/75 (88%), Positives = 70/75 (93%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 260 PRAILVDLEPGTMDS 304
PRA+LVDLEPGTMDS
Sbjct: 61 PRAVLVDLEPGTMDS 75
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 149 bits (361), Expect = 4e-37
Identities = 66/75 (88%), Positives = 70/75 (93%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 260 PRAILVDLEPGTMDS 304
PRA+LVDLEPGTMDS
Sbjct: 61 PRAVLVDLEPGTMDS 75
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 144 bits (349), Expect = 1e-35
Identities = 62/75 (82%), Positives = 70/75 (93%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 260 PRAILVDLEPGTMDS 304
PRA+LVDLEPGTMDS
Sbjct: 61 PRAVLVDLEPGTMDS 75
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 143 bits (346), Expect = 2e-35
Identities = 61/75 (81%), Positives = 70/75 (93%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 260 PRAILVDLEPGTMDS 304
PRA+LVDLEPGTMDS
Sbjct: 61 PRAVLVDLEPGTMDS 75
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 109 bits (263), Expect = 3e-25
Identities = 47/74 (63%), Positives = 58/74 (78%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 260 PRAILVDLEPGTMD 301
PRAILVDL+P +++
Sbjct: 61 PRAILVDLDPESIN 74
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 109 bits (263), Expect = 3e-25
Identities = 47/74 (63%), Positives = 58/74 (78%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 260 PRAILVDLEPGTMD 301
PRAILVDL+P +++
Sbjct: 61 PRAILVDLDPESIN 74
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 76.2 bits (179), Expect = 4e-15
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Frame = +2
Query: 68 RYIKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNE 238
+Y RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E
Sbjct: 3 QYKGSREVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAE 61
Query: 239 ASGGKYVPRAILVDLEPGTMD 301
+GGK+VPR + VDLEP +D
Sbjct: 62 TAGGKHVPRCLFVDLEPTVVD 82
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 73.7 bits (173), Expect = 2e-14
Identities = 32/74 (43%), Positives = 42/74 (56%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 260 PRAILVDLEPGTMD 301
PR+I VDLEP +D
Sbjct: 61 PRSIFVDLEPTVVD 74
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 73.7 bits (173), Expect = 2e-14
Identities = 32/74 (43%), Positives = 42/74 (56%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 260 PRAILVDLEPGTMD 301
PR+I VDLEP +D
Sbjct: 61 PRSIFVDLEPTVVD 74
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 72.5 bits (170), Expect = 5e-14
Identities = 37/76 (48%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 253
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 254 YVPRAILVDLEPGTMD 301
+VPRAI VDLEP +D
Sbjct: 61 HVPRAIFVDLEPTVID 76
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 71.7 bits (168), Expect = 9e-14
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 260 PRAILVDLEPGTMD 301
PR+I VDLEP +D
Sbjct: 61 PRSIFVDLEPTVVD 74
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 71.7 bits (168), Expect = 9e-14
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 260 PRAILVDLEPGTMD 301
PR+I VDLEP +D
Sbjct: 61 PRSIFVDLEPTVVD 74
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 70.1 bits (164), Expect = 3e-13
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Frame = +2
Query: 77 KMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGG 250
+ RE++ I GQ G Q+G WE+ EHGI P G + + L + + N +++E G
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 251 KYVPRAILVDLEPGTMD 301
K+VPRAI+VDLEP +D
Sbjct: 65 KHVPRAIMVDLEPTPID 81
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 69.7 bits (163), Expect = 4e-13
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 254 YVPRAILVDLEPGTMD 301
+VPRA++VDLEP +D
Sbjct: 61 HVPRAVMVDLEPTVID 76
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 69.7 bits (163), Expect = 4e-13
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 254 YVPRAILVDLEPGTMD 301
+VPRA++VDLEP +D
Sbjct: 61 HVPRAVMVDLEPTVID 76
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 69.7 bits (163), Expect = 4e-13
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 254 YVPRAILVDLEPGTMD 301
+VPRA++VDLEP +D
Sbjct: 61 HVPRAVMVDLEPTVID 76
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 69.3 bits (162), Expect = 5e-13
Identities = 30/74 (40%), Positives = 42/74 (56%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 260 PRAILVDLEPGTMD 301
PR+I VDLEP +D
Sbjct: 61 PRSIFVDLEPTVVD 74
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 69.3 bits (162), Expect = 5e-13
Identities = 30/74 (40%), Positives = 42/74 (56%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 260 PRAILVDLEPGTMD 301
PR+I VDLEP +D
Sbjct: 61 PRSIFVDLEPTVVD 74
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 67.7 bits (158), Expect = 1e-12
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 256
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 257 VPRAILVDLEPGTMD 301
VPRA++VDLEP +D
Sbjct: 61 VPRAVMVDLEPTVID 75
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 65.3 bits (152), Expect = 8e-12
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG-AYHGDSDLQLERINVYYNEASGGKYV 259
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 260 PRAILVDLEPGTMD 301
PRAI VDLEP +D
Sbjct: 66 PRAIYVDLEPTVLD 79
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 64.1 bits (149), Expect = 2e-11
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = +2
Query: 89 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 268
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 269 ILVDLEP 289
+LVDLEP
Sbjct: 66 VLVDLEP 72
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 64.1 bits (149), Expect = 2e-11
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = +2
Query: 89 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 268
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 269 ILVDLEP 289
+LVDLEP
Sbjct: 66 VLVDLEP 72
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 62.1 bits (144), Expect = 7e-11
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 260 PRAILVDLEPGTMD 301
PR+I VDLEP +D
Sbjct: 60 PRSIFVDLEPTVVD 73
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 52.8 bits (121), Expect = 5e-08
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +2
Query: 158 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMD 301
EHGI P G YH + D + E IN ++ E +GGK+VPR + VDLEP +D
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVD 54
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 28.7 bits (61), Expect = 0.85
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 135 SSGRSSPMSTASTPPVLTTATQTC-SWSASMFIT 233
SS SS STAST T + +C SW+A+ F T
Sbjct: 171 SSDSSSSSSTASTSSSCTDSASSCSSWAANGFCT 204
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 99 SRPDNAETRLELSSGRSSPMSTASTPPVLTTATQ 200
++PD + + +LSS SS + AS PP +T Q
Sbjct: 906 TKPDVEKLKQQLSSSSSSSQAEASDPPSTSTEAQ 939
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 99 SRPDNAETRLELSSGRSSPMSTASTPPVLTTATQ 200
++PD + + +LSS SS + AS PP +T Q
Sbjct: 906 TKPDVEKLKQQLSSSSSSSQAEASDPPSTSTEAQ 939
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 1.5
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 146 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDL 283
I S+ H I T + H DS R + GG + R IL+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
assigned gene nameprotein 80 protein.
Length = 4900
Score = 27.9 bits (59), Expect = 1.5
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 63 SSDISK*GKSCTSRPDNAETRLE--LSSGRSSPMSTASTPPVL 185
SSD K +S TS PDNAET LE + +S P S PV+
Sbjct: 3577 SSDREK--RSGTSFPDNAETSLEDDTAHEKSYPQLEPSEEPVM 3617
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 27.5 bits (58), Expect = 2.0
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 87 KSCTSRPDNAETRLELS--SGRSSPMSTASTPPVLTTA 194
KS S D+ R E S S SPMST P VLT A
Sbjct: 1212 KSSVSSIDDPSIRDEFSMNSAADSPMSTTGRPMVLTKA 1249
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 27.5 bits (58), Expect = 2.0
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 87 KSCTSRPDNAETRLELS--SGRSSPMSTASTPPVLTTA 194
KS S D+ R E S S SPMST P VLT A
Sbjct: 1503 KSSVSSIDDPSIRDEFSMNSAADSPMSTTGRPMVLTKA 1540
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 27.5 bits (58), Expect = 2.0
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 87 KSCTSRPDNAETRLELS--SGRSSPMSTASTPPVLTTA 194
KS S D+ R E S S SPMST P VLT A
Sbjct: 1518 KSSVSSIDDPSIRDEFSMNSAADSPMSTTGRPMVLTKA 1555
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.5 bits (58), Expect = 2.0
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 87 KSCTSRPDNAETRLELS--SGRSSPMSTASTPPVLTTA 194
KS S D+ R E S S SPMST P VLT A
Sbjct: 1518 KSSVSSIDDPSIRDEFSMNSAADSPMSTTGRPMVLTKA 1555
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.5 bits (58), Expect = 2.0
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 87 KSCTSRPDNAETRLELS--SGRSSPMSTASTPPVLTTA 194
KS S D+ R E S S SPMST P VLT A
Sbjct: 1212 KSSVSSIDDPSIRDEFSMNSAADSPMSTTGRPMVLTKA 1249
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.5 bits (58), Expect = 2.0
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 87 KSCTSRPDNAETRLELS--SGRSSPMSTASTPPVLTTA 194
KS S D+ R E S S SPMST P VLT A
Sbjct: 1503 KSSVSSIDDPSIRDEFSMNSAADSPMSTTGRPMVLTKA 1540
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.5 bits (58), Expect = 2.0
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 87 KSCTSRPDNAETRLELS--SGRSSPMSTASTPPVLTTA 194
KS S D+ R E S S SPMST P VLT A
Sbjct: 1518 KSSVSSIDDPSIRDEFSMNSAADSPMSTTGRPMVLTKA 1555
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.5 bits (58), Expect = 2.0
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 87 KSCTSRPDNAETRLELS--SGRSSPMSTASTPPVLTTA 194
KS S D+ R E S S SPMST P VLT A
Sbjct: 1518 KSSVSSIDDPSIRDEFSMNSAADSPMSTTGRPMVLTKA 1555
>U70857-10|AAB09175.1| 385|Caenorhabditis elegans Hypothetical
protein C10G8.8a protein.
Length = 385
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 150 SPMSTASTPPVLTTATQTCSWS 215
SP S++ TPP TT +T WS
Sbjct: 50 SPKSSSQTPPKATTPDRTGQWS 71
>Z83108-2|CAB05510.1| 820|Caenorhabditis elegans Hypothetical
protein F44E5.2 protein.
Length = 820
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 142 PELSSNLVSALSGLDVHDFPHFDISELNKLLNTNIFCSARTT-HFRLV 2
PE+S+ + + L LD+ P++ + KL T C TT H +L+
Sbjct: 29 PEISNQIFTKLVALDIELDPNYCLQISRKLNITKAVCKNVTTEHIKLL 76
>Z71180-7|CAK55177.1| 647|Caenorhabditis elegans Hypothetical
protein F22E12.4e protein.
Length = 647
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 51 SNLFSSDISK*GKSCTSRPDNAETRLELSSGRSSPMSTASTPPVLTTATQTCSWSASMFI 230
S+ SDIS+ + + D+ + +++ S STA+ PP TT + S S I
Sbjct: 141 SSTAQSDISRLAQVLSLAGDSPASLALVTTSVPSTASTATIPPPATTTSSATSSGKSETI 200
Query: 231 TM 236
T+
Sbjct: 201 TV 202
>Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 51 SNLFSSDISK*GKSCTSRPDNAETRLELSSGRSSPMSTASTPPVLTTATQTCSWSASMFI 230
S+ SDIS+ + + D+ + +++ S STA+ PP TT + S S I
Sbjct: 217 SSTAQSDISRLAQVLSLAGDSPASLALVTTSVPSTASTATIPPPATTTSSATSSGKSETI 276
Query: 231 TM 236
T+
Sbjct: 277 TV 278
>Z71180-5|CAD44114.1| 363|Caenorhabditis elegans Hypothetical
protein F22E12.4b protein.
Length = 363
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 51 SNLFSSDISK*GKSCTSRPDNAETRLELSSGRSSPMSTASTPPVLTTATQTCSWSASMFI 230
S+ SDIS+ + + D+ + +++ S STA+ PP TT + S S I
Sbjct: 217 SSTAQSDISRLAQVLSLAGDSPASLALVTTSVPSTASTATIPPPATTTSSATSSGKSETI 276
Query: 231 TM 236
T+
Sbjct: 277 TV 278
>Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 51 SNLFSSDISK*GKSCTSRPDNAETRLELSSGRSSPMSTASTPPVLTTATQTCSWSASMFI 230
S+ SDIS+ + + D+ + +++ S STA+ PP TT + S S I
Sbjct: 217 SSTAQSDISRLAQVLSLAGDSPASLALVTTSVPSTASTATIPPPATTTSSATSSGKSETI 276
Query: 231 TM 236
T+
Sbjct: 277 TV 278
>Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.7 protein.
Length = 329
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 6 RRKCVVRAEQKILVLSNLFSSDI 74
++KC+ + KIL+ NLFS++I
Sbjct: 46 QKKCIFQLSTKILLYQNLFSANI 68
>AL021475-8|CAK55192.1| 647|Caenorhabditis elegans Hypothetical
protein F22E12.4e protein.
Length = 647
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 51 SNLFSSDISK*GKSCTSRPDNAETRLELSSGRSSPMSTASTPPVLTTATQTCSWSASMFI 230
S+ SDIS+ + + D+ + +++ S STA+ PP TT + S S I
Sbjct: 141 SSTAQSDISRLAQVLSLAGDSPASLALVTTSVPSTASTATIPPPATTTSSATSSGKSETI 200
Query: 231 TM 236
T+
Sbjct: 201 TV 202
>AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 51 SNLFSSDISK*GKSCTSRPDNAETRLELSSGRSSPMSTASTPPVLTTATQTCSWSASMFI 230
S+ SDIS+ + + D+ + +++ S STA+ PP TT + S S I
Sbjct: 217 SSTAQSDISRLAQVLSLAGDSPASLALVTTSVPSTASTATIPPPATTTSSATSSGKSETI 276
Query: 231 TM 236
T+
Sbjct: 277 TV 278
>AL021475-6|CAD44157.1| 363|Caenorhabditis elegans Hypothetical
protein F22E12.4b protein.
Length = 363
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 51 SNLFSSDISK*GKSCTSRPDNAETRLELSSGRSSPMSTASTPPVLTTATQTCSWSASMFI 230
S+ SDIS+ + + D+ + +++ S STA+ PP TT + S S I
Sbjct: 217 SSTAQSDISRLAQVLSLAGDSPASLALVTTSVPSTASTATIPPPATTTSSATSSGKSETI 276
Query: 231 TM 236
T+
Sbjct: 277 TV 278
>AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 51 SNLFSSDISK*GKSCTSRPDNAETRLELSSGRSSPMSTASTPPVLTTATQTCSWSASMFI 230
S+ SDIS+ + + D+ + +++ S STA+ PP TT + S S I
Sbjct: 217 SSTAQSDISRLAQVLSLAGDSPASLALVTTSVPSTASTATIPPPATTTSSATSSGKSETI 276
Query: 231 TM 236
T+
Sbjct: 277 TV 278
>AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein.
Length = 723
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 51 SNLFSSDISK*GKSCTSRPDNAETRLELSSGRSSPMSTASTPPVLTTATQTCSWSASMFI 230
S+ SDIS+ + + D+ + +++ S STA+ PP TT + S S I
Sbjct: 217 SSTAQSDISRLAQVLSLAGDSPASLALVTTSVPSTASTATIPPPATTTSSATSSGKSETI 276
Query: 231 TM 236
T+
Sbjct: 277 TV 278
>U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical protein
B0416.1 protein.
Length = 1203
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 87 KSCTSRPDNAETRLELSSGRSSPMSTASTPPVLTTATQTCSWSAS 221
KS T+ P N+E R+E++ +P+ T TP + + S S+S
Sbjct: 988 KSTTTAPSNSEMRIEIT---ENPLHTYITPLRIEKKSSASSSSSS 1029
>AL023842-4|CAA19517.2| 229|Caenorhabditis elegans Hypothetical
protein Y44A6D.3 protein.
Length = 229
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 99 SRPDNAETRLELSSGRSSPMSTASTPPVLTTATQTCSWS 215
++PD+ T + SS S++STPP T+ T S S
Sbjct: 160 AKPDSISTASSVVGTPSSISSSSSTPPPSTSPVPTSSGS 198
>AL117203-21|CAN86632.1| 171|Caenorhabditis elegans Hypothetical
protein Y48C3A.18b protein.
Length = 171
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2
Query: 131 LQSGFRIVRPGCA 93
++SGFRIVR GCA
Sbjct: 114 VESGFRIVRSGCA 126
>AL117203-20|CAB55118.1| 244|Caenorhabditis elegans Hypothetical
protein Y48C3A.18a protein.
Length = 244
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2
Query: 131 LQSGFRIVRPGCA 93
++SGFRIVR GCA
Sbjct: 187 VESGFRIVRSGCA 199
>AF047652-4|AAC04392.2| 399|Caenorhabditis elegans Hypothetical
protein C34H4.3 protein.
Length = 399
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 135 SSGRSSPMSTASTPPVLTTATQTCSWSASMFITM 236
SS ++P + +TPPV+TT + + S FI +
Sbjct: 357 SSVATNPPNPQTTPPVITTTKLASNLNLSSFILL 390
>U56963-7|AAQ01523.1| 526|Caenorhabditis elegans Amino acid
transporter protein 4 protein.
Length = 526
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3
Query: 52 LNTNIFCSARTTH 14
LN+NIFC +R TH
Sbjct: 313 LNSNIFCGSRFTH 325
>AL117201-2|CAI79268.1| 527|Caenorhabditis elegans Hypothetical
protein Y53H1C.1b protein.
Length = 527
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3
Query: 52 LNTNIFCSARTTH 14
LN+NIFC +R TH
Sbjct: 316 LNSNIFCGSRFTH 328
>AL117201-1|CAB55063.1| 541|Caenorhabditis elegans Hypothetical
protein Y53H1C.1a protein.
Length = 541
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3
Query: 52 LNTNIFCSARTTH 14
LN+NIFC +R TH
Sbjct: 316 LNSNIFCGSRFTH 328
>AF099915-8|AAC68768.2| 231|Caenorhabditis elegans Hypothetical
protein E02H9.2 protein.
Length = 231
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 212 PAASLSRRGKHRWGRCRAHRR*SPRT*LQSGFRIVRPG 99
P + LSR+G R+ ++HR SP ++ PG
Sbjct: 113 PRSKLSRKGISRYPTIKSHRSNSPSDGAYEYIDVIYPG 150
>AF036693-8|AAK29793.2| 440|Caenorhabditis elegans Hypothetical
protein C49A9.4 protein.
Length = 440
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 212 PAASLSRRGKHRWGRCRAHRR*SPRT*LQSGFRIVRPG 99
P + LSR+G R+ ++HR SP ++ PG
Sbjct: 154 PRSKLSRKGISRYPTIKSHRSNSPSDGAYEYIDVIYPG 191
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,437,420
Number of Sequences: 27780
Number of extensions: 114738
Number of successful extensions: 524
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 323034540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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