Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_E21
         (184 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   2.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   2.4  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          20   3.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   3.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      20   3.1  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    19   4.1  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    19   7.2  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    19   7.2  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 107 RVFYYIIYLLNVSF 66
           R  +Y  YLLNVSF
Sbjct: 367 RGVFYKNYLLNVSF 380


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 107 RVFYYIIYLLNVSF 66
           R  +Y  YLLNVSF
Sbjct: 457 RGVFYKNYLLNVSF 470


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 143 YFLEFIKFNCIYLY 184
           YF+E ++ N  Y Y
Sbjct: 223 YFMEDVELNAYYYY 236


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 137 IIYFLEFIKFNCIYLY 184
           +IYF+E I  N  Y +
Sbjct: 220 LIYFIEDIGLNTYYFF 235


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 143 YFLEFIKFNCIYLY 184
           YF+E ++ N  Y Y
Sbjct: 223 YFMEDVELNAYYYY 236


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -3

Query: 101 FYYIIYLLNVSFDKLITSKGIILMKIDILEEPR 3
           F  I Y + + F+ L+  +   +    +LE PR
Sbjct: 16  FILINYFIFLYFNSLVRFRRFTIELDKVLESPR 48


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 52  VINLSKLTLSRYI 90
           ++NL  ++L RYI
Sbjct: 113 ILNLCAISLDRYI 125


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 112 FRINKSVVYNIFSR 153
           FRI++   YN + R
Sbjct: 411 FRISRVAAYNTYGR 424


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,550
Number of Sequences: 438
Number of extensions: 534
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 40
effective length of database: 128,823
effective search space used:  2576460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)