Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_E19
(576 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 348 2e-96
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 348 2e-96
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 348 2e-96
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 348 2e-96
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 348 2e-96
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 348 2e-96
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 347 3e-96
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 345 1e-95
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 336 5e-93
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 309 8e-85
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 255 2e-68
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 213 1e-55
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 8e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 8e-48
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 185 2e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 9e-46
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 171 4e-43
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 142 2e-34
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 101 5e-22
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 52 4e-07
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 41 5e-04
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 34 0.083
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.25
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 32 0.34
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 0.78
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 30 1.4
Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein. 29 2.4
U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein... 29 2.4
U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein... 29 2.4
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 29 3.1
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 29 3.1
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 29 3.1
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 29 3.1
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 4.1
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 4.1
Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.5
AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical ... 27 7.2
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 9.5
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 27 9.5
AC006662-3|AAF39895.1| 368|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 348 bits (855), Expect = 2e-96
Identities = 160/163 (98%), Positives = 163/163 (100%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 267
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 447
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 448 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 576
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 348 bits (855), Expect = 2e-96
Identities = 160/163 (98%), Positives = 163/163 (100%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 267
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 447
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 448 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 576
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 348 bits (855), Expect = 2e-96
Identities = 160/163 (98%), Positives = 163/163 (100%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 267
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 447
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 448 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 576
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 348 bits (855), Expect = 2e-96
Identities = 160/163 (98%), Positives = 163/163 (100%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 267
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 447
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 448 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 576
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 348 bits (855), Expect = 2e-96
Identities = 160/163 (98%), Positives = 163/163 (100%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 267
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 447
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 448 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 576
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 348 bits (855), Expect = 2e-96
Identities = 160/163 (98%), Positives = 163/163 (100%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 267
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 447
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 448 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 576
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 347 bits (853), Expect = 3e-96
Identities = 160/163 (98%), Positives = 163/163 (100%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 267
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 447
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 448 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 576
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHT 163
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 345 bits (849), Expect = 1e-95
Identities = 158/163 (96%), Positives = 163/163 (100%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 267
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 447
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 448 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 576
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHT 163
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 336 bits (827), Expect = 5e-93
Identities = 154/161 (95%), Positives = 160/161 (99%)
Frame = +1
Query: 94 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 273
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 274 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 453
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 454 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 576
IMFETFNTPAMYV IQAVLSLYASGRTTGIVLD+GDGV+HT
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHT 162
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 309 bits (759), Expect = 8e-85
Identities = 142/145 (97%), Positives = 145/145 (100%)
Frame = +1
Query: 142 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 321
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 322 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 501
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 502 AVLSLYASGRTTGIVLDSGDGVSHT 576
AVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHT 149
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 255 bits (624), Expect = 2e-68
Identities = 117/119 (98%), Positives = 119/119 (100%)
Frame = +1
Query: 220 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 399
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 400 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 576
LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 119
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 213 bits (519), Expect = 1e-55
Identities = 92/155 (59%), Positives = 123/155 (79%), Gaps = 1/155 (0%)
Frame = +1
Query: 112 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 291
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 292 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 468
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 469 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 573
FN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTH 165
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 8e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 267
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 SKRGILTLKYPIEHGIVTNWDDMEKI 345
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 8e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 267
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 SKRGILTLKYPIEHGIVTNWDDMEKI 345
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 2e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 267
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 SKRGILTLKYPIEHGIVTNWDDMEKI 345
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 9e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 267
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 268 SKRGILTLKYPIEHGIVTNWDDM 336
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 171 bits (415), Expect = 4e-43
Identities = 83/157 (52%), Positives = 111/157 (70%), Gaps = 3/157 (1%)
Frame = +1
Query: 112 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 285
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 286 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 462
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 463 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 573
E + ++YVA+QAVL+LYA G TG+V+DSGDGV+H
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTH 165
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 142 bits (343), Expect = 2e-34
Identities = 79/183 (43%), Positives = 105/183 (57%), Gaps = 21/183 (11%)
Frame = +1
Query: 88 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 231
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 232 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 408
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 409 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDG 564
E PLN NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDG
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDG 180
Query: 565 VSH 573
V+H
Sbjct: 181 VTH 183
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 101 bits (241), Expect = 5e-22
Identities = 62/171 (36%), Positives = 92/171 (53%), Gaps = 17/171 (9%)
Frame = +1
Query: 97 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 270
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 271 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 405
KR G + P ++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 406 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 558
+E+ N +A REK+T+IMFE F PA Y++ VLS +A GRT G+++DSG
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSG 179
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 51.6 bits (118), Expect = 4e-07
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 4/156 (2%)
Frame = +1
Query: 103 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 282
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 283 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 462
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 463 ETFNTPAMYVAIQAVLSLYASGRTT----GIVLDSG 558
+ F ++ + L S + +V+DSG
Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 51.6 bits (118), Expect = 4e-07
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 4/156 (2%)
Frame = +1
Query: 103 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 282
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 283 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 462
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 463 ETFNTPAMYVAIQAVLSLYASGRTT----GIVLDSG 558
+ F ++ + L S + +V+DSG
Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 41.1 bits (92), Expect = 5e-04
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 2/155 (1%)
Frame = +1
Query: 112 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 285
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 286 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 465
+E + D+ K EL+V P ++ VLL+ P ++ QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 466 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 570
+ + Q L LYA TTG+V+D G+ V+
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIGERVN 333
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 33.9 bits (74), Expect = 0.083
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 233 PMPTMTPW*RGRPTIEGNTARGASSPAKPALHIPDPL 123
P T TP RGRP I + ++ P P PDPL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 32.3 bits (70), Expect = 0.25
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 566 TPSPESSTIPVVRPDAYSESTAWIATYMAGVL 471
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 31.9 bits (69), Expect = 0.34
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = +2
Query: 368 SCV*LPRSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPP--CT*LSRPCSHCTRPVVPP 538
+C PR + SC P +P P P C PS P C P + C P PP
Sbjct: 69 NCCGAPRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPP 127
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.7 bits (66), Expect = 0.78
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +2
Query: 389 STQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAMVY 568
+++S SP P P P L P PP +S+ + PV PP + P+M+
Sbjct: 1330 TSRSSSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMIL 1389
Query: 569 P 571
P
Sbjct: 1390 P 1390
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 195 GATSSPGRHGRHGSEG 242
G + +PGRHGRHG+ G
Sbjct: 109 GPSGTPGRHGRHGAPG 124
>Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical
protein ZK678.1 protein.
Length = 719
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 386 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 532
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein.
Length = 722
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 386 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 532
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 386 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 532
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 386 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 532
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 206 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 96
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 641 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 206 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 96
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 206 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 96
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 206 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 96
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 676
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -2
Query: 317 TMPCSMGYLSVRIPLLLCASSPT*ESF*PMPTMTPW*RGRPTIEGN-TARGASSPAKPAL 141
T+ S PL++ +SS S T+TP +G PT N S+P P
Sbjct: 451 TLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKS 510
Query: 140 HIPDPLSTTNAATSSS 93
+ STT A +++S
Sbjct: 511 TVTASPSTTGATSTAS 526
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = +3
Query: 195 GATSSPGRHGRHGSEGLLRR**G-TEQEGYPHTQIPH----RTRHRHQLGR 332
G PGRHGRHGS R G + G PH H H H GR
Sbjct: 358 GPPHCPGRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGR 408
>Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 383 PRSTQSCSPKLPSTPKPTE 439
P STQ+ P+LP P+P E
Sbjct: 21 PMSTQTSEPQLPDVPEPNE 39
>Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 383 PRSTQSCSPKLPSTPKPTE 439
P STQ+ P+LP P+P E
Sbjct: 89 PMSTQTSEPQLPDVPEPNE 107
>Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 383 PRSTQSCSPKLPSTPKPTE 439
P STQ+ P+LP P+P E
Sbjct: 21 PMSTQTSEPQLPDVPEPNE 39
>Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 383 PRSTQSCSPKLPSTPKPTE 439
P STQ+ P+LP P+P E
Sbjct: 89 PMSTQTSEPQLPDVPEPNE 107
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 142 KAGFAGDDAPRAVFPSIVGRPRHQG 216
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical
protein Y53G8AM.4 protein.
Length = 309
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 531 YHRYRAGFRRWCIP 572
YH+YRA FR W +P
Sbjct: 135 YHKYRAFFRGWFVP 148
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 295 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 396
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 295 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 396
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +2
Query: 389 STQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPP 538
ST + P+ P + R L SR T P C +R + TR VPP
Sbjct: 327 STTGAARTRPAIPAVSAPR--ALTSRAPTGPACPTTTRSAAPATRTAVPP 374
>AC006662-3|AAF39895.1| 368|Caenorhabditis elegans Hypothetical
protein H23L24.4 protein.
Length = 368
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = -2
Query: 518 YSESTAWIATYMAGVLKVSNIICVIFSLLA 429
Y S+ TY+ +L++S+II ++FS+++
Sbjct: 52 YKRSSTCTRTYIFVILRLSSIILLVFSIIS 81
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,252,841
Number of Sequences: 27780
Number of extensions: 333148
Number of successful extensions: 1329
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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