Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_E17
(519 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 56 1e-08
Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AF026152-1|AAB81847.1| 117|Caenorhabditis elegans chitinase pro... 50 1e-06
Z70035-12|CAB76726.1| 150|Caenorhabditis elegans Hypothetical p... 46 1e-05
Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical pr... 34 0.053
Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical pr... 33 0.093
Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical pr... 33 0.093
Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical p... 33 0.12
Z54342-7|CAA91149.1| 460|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z47745-2|CAA87664.1| 407|Caenorhabditis elegans Hypothetical pr... 32 0.21
Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical pr... 32 0.28
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr... 31 0.49
Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical pr... 30 1.1
U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog (... 30 1.1
U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog (... 30 1.1
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 29 2.0
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 29 2.0
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z70035-13|CAA93874.1| 432|Caenorhabditis elegans Hypothetical p... 28 3.5
Z47745-6|CAA87667.1| 432|Caenorhabditis elegans Hypothetical pr... 28 3.5
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 3.5
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 3.5
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 3.5
AL110490-9|CAB54453.2| 607|Caenorhabditis elegans Hypothetical ... 27 8.0
AF039650-1|AAC14022.3| 607|Caenorhabditis elegans acetylcholine... 27 8.0
AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical ... 27 8.0
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 56.4 bits (130), Expect = 1e-08
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Frame = +2
Query: 146 CYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRA-HA 322
CY+ + + R+ +A+ +P D P L CTH+L+ + AD +L D A
Sbjct: 57 CYFTNWAQYRQGRAKFVPEDYTPGL--CTHILFAFGWMNADYTVRAYDPADLPNDWAGEG 114
Query: 323 NYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFD 502
YR + LK QL+ L+ GG + + + S +R F +SA+ +GFD
Sbjct: 115 MYRRVNKLKVTDTQLKTLLSFGGW--SFGTALFQGMAASSASRKVFIDSAITFVRTWGFD 172
Query: 503 GIDL 514
GID+
Sbjct: 173 GIDI 176
>Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical
protein R09D1.8 protein.
Length = 446
Score = 49.6 bits (113), Expect = 1e-06
Identities = 33/138 (23%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
Frame = +2
Query: 104 TNHPASPSSQSKVLCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMV 283
+ +PA+P +++ YY + +Q ++ D +S TH ++ + +D + +
Sbjct: 75 STYPATPGCNKRIIGYYFA------TQTSVITRD---QVSKLTHAVFAFVNMTSDGHLQI 125
Query: 284 SLNENLDIDRAHANYRAITNL-KRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAF 460
D D A + + + K+Q PQ++V +++GG+D++ + + +L SP + F
Sbjct: 126 ------DGDLAKNRFTNLIEIAKQQTPQVKVMISIGGNDNSNN---FKPVLSSPDRKKLF 176
Query: 461 TNSALLLAEQYGFDGIDL 514
NS + + Y DG+DL
Sbjct: 177 INSTVSFLQTYDIDGVDL 194
>AF026152-1|AAB81847.1| 117|Caenorhabditis elegans chitinase
protein.
Length = 117
Score = 49.6 bits (113), Expect = 1e-06
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Frame = +2
Query: 173 RESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRA-HANYRAITNLK 349
R+ +A+ +P D P L CTH+L+ + AD +L D A YR + LK
Sbjct: 5 RQGRAKFVPEDYTPGL--CTHILFAFGWMNADYTVRAYDPADLPNDWAGEGMYRRVNKLK 62
Query: 350 RQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDL 514
QL+ L+ GG + + + S +R F +SA +GFDGIDL
Sbjct: 63 VTDTQLKTLLSFGGC--SFGTALFQGMAASSASRKVFIDSATTSVRTWGFDGIDL 115
>Z70035-12|CAB76726.1| 150|Caenorhabditis elegans Hypothetical
protein R09D1.14 protein.
Length = 150
Score = 46.4 bits (105), Expect = 1e-05
Identities = 32/136 (23%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Frame = +2
Query: 104 TNHPASPSSQSKVLCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMV 283
+ +PA+P +++ YY + +Q ++ +D +S TH ++ I +D +
Sbjct: 33 STYPATPGCNKRIIGYYFA------TQTSVITSD---QVSNLTHAVFAFVNITSDGQLQI 83
Query: 284 SLNENLDIDRAHANYRAITNL-KRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAF 460
D D A + + + K+Q PQ++V +++GG+D++ + + +L SP + F
Sbjct: 84 ------DGDLAKNRFTNLIEIAKQQTPQVKVMISIGGNDNSNN---FKPVLSSPDRKKLF 134
Query: 461 TNSALLLAEQYGFDGI 508
NS + + Y DG+
Sbjct: 135 INSTVSFLQTYDIDGV 150
>Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical
protein R09D1.7 protein.
Length = 369
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +2
Query: 347 KRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDL 514
K+Q P ++V +++GGDD++ + K +L SP R F N+ + YG DGIDL
Sbjct: 65 KQQTPPVKVMISIGGDDNSNNFYK---VLNSPNRRKVFLNATTSFLQIYGIDGIDL 117
>Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical
protein R09D1.6 protein.
Length = 444
Score = 43.6 bits (98), Expect = 9e-05
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +2
Query: 296 NLDIDRAHANYRAITNL----KRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFT 463
+L ID A R TNL K+Q PQ++V +++GG+D++ + + L SP + F
Sbjct: 120 HLQIDGDLAKNR-FTNLIEIAKQQTPQVKVMISIGGNDNSNN---FKPGLSSPDRKKLFI 175
Query: 464 NSALLLAEQYGFDGIDL 514
NS + + Y DG+DL
Sbjct: 176 NSTVSFLQTYDIDGVDL 192
>Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical
protein T13H5.3 protein.
Length = 626
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/72 (26%), Positives = 38/72 (52%)
Frame = +2
Query: 299 LDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALL 478
L+ D A A + + + P L++ VGG E+ Q +++L R+ ++ +
Sbjct: 72 LEGDAAKARLEHVKEVASRHPDLKLLYAVGG---WENSQYFSVLTADHSRRSILISNFVK 128
Query: 479 LAEQYGFDGIDL 514
+ ++YGFDG+D+
Sbjct: 129 VIKEYGFDGVDI 140
>Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical
protein R09D1.10 protein.
Length = 450
Score = 34.3 bits (75), Expect = 0.053
Identities = 14/52 (26%), Positives = 32/52 (61%)
Frame = +2
Query: 359 PQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDL 514
P+L++ +++GG ++++ + ++ SP + F NS + ++Y DG+DL
Sbjct: 142 PKLKMLISIGGPANSDN---FLPVISSPDRKKIFINSIVSFLKKYDIDGVDL 190
>Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical
protein C08H9.10 protein.
Length = 457
Score = 33.5 bits (73), Expect = 0.093
Identities = 16/70 (22%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 308 DRAHANYRAITNLKRQFPQ-LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLA 484
+R+ + + N R+ L+V +++GG ++ + ++ L+ + +R F NS +
Sbjct: 152 ERSRRKFEEMKNEARKANSTLKVMISIGGQSNS---RSFSRLVSNETSRNVFVNSIVSFV 208
Query: 485 EQYGFDGIDL 514
++Y DGI++
Sbjct: 209 QKYDIDGIEI 218
>Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical
protein T19H5.1 protein.
Length = 445
Score = 33.5 bits (73), Expect = 0.093
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 365 LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDL 514
+++ +++GG E+ Q ++ ++ES R F NS L ++ DGIDL
Sbjct: 134 VKIMISIGGK---ENSQNFSPVIESEYRRQIFINSILTFLKENDLDGIDL 180
>Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical
protein C08H9.4b protein.
Length = 465
Score = 33.1 bits (72), Expect = 0.12
Identities = 15/59 (25%), Positives = 34/59 (57%)
Frame = +2
Query: 338 TNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDL 514
+N + L++ +++GG ++ + ++ L+ + +RT F NS + E+Y DGI++
Sbjct: 170 SNAREASSTLKIMISIGGHYNS---RSFSGLVFNETSRTVFVNSIVSFVEKYDIDGIEM 225
>Z54342-7|CAA91149.1| 460|Caenorhabditis elegans Hypothetical
protein C08H9.12 protein.
Length = 460
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +2
Query: 347 KRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDL 514
+++ L+V +++GG + + ++ L+ +R FTNS + + Y DG+D+
Sbjct: 168 RKESSTLKVMISIGGQYSSGE---FSGLVSKETSRNLFTNSIVSFVQNYDIDGVDI 220
>Z47745-2|CAA87664.1| 407|Caenorhabditis elegans Hypothetical
protein T19H5.3 protein.
Length = 407
Score = 32.3 bits (70), Expect = 0.21
Identities = 16/79 (20%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 281 VSLNENLDIDRAHANYRAITNLKR-QFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTA 457
+ + ++++D + + + + + + L++GG +T Q L++ P+ +
Sbjct: 111 IGFDGSVEVDHSSRTFSKLKEKSKIESSHFKKLLSIGGRSNT---QFLPLVIADPRRKRR 167
Query: 458 FTNSALLLAEQYGFDGIDL 514
F S + + E+Y DG+DL
Sbjct: 168 FFKSIISILEEYQLDGVDL 186
>Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical
protein ZK938.6 protein.
Length = 460
Score = 31.9 bits (69), Expect = 0.28
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = +2
Query: 341 NLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDL 514
N+++ L+V +++GG ++ + ++ L+ + +R F NS Y DG+D+
Sbjct: 166 NVRKASSTLKVMISIGGQYNSGE---FSGLVSNETSRNLFVNSIATFVRDYDIDGVDI 220
>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
protein C25A8.4 protein.
Length = 1067
Score = 31.1 bits (67), Expect = 0.49
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +2
Query: 182 QARMLPTDLEPALSFCTHLLYKSAGIQADT----YKMVSLNENLDIDRAHANYRAITNLK 349
+ R+ P L+ ++ CTHL+Y S I DT Y + + DID N R L+
Sbjct: 37 KTRLSPNLLQN-ITTCTHLVYGSIPIDRDTGYPQYSVSDVESGYDID----NIRTFMRLR 91
Query: 350 RQFPQLRVFLTVGGDDDTED 409
+ P ++ + V ED
Sbjct: 92 KYHPNAKLLMGVVRTKPFED 111
>Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical
protein R09D1.2 protein.
Length = 440
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/49 (24%), Positives = 29/49 (59%)
Frame = +2
Query: 368 RVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDL 514
++ ++GG +T Q ++ ++++ + + F +S + +QY DG+DL
Sbjct: 150 KIMFSIGGPANT---QFFSPIIQNEEMKRKFIDSIIYFLKQYKLDGVDL 195
>U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform b protein.
Length = 1069
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +2
Query: 224 FCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDT 403
F +L K GI A YK+VSLN L++ + A N R+ +F + DDD
Sbjct: 511 FSRYLHTKQRGIPAKVYKVVSLNSCLEVCAGNPTC-AGANYNRRLGDCTLFDAI--DDDA 567
Query: 404 E 406
E
Sbjct: 568 E 568
>U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform a protein.
Length = 1065
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +2
Query: 224 FCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDT 403
F +L K GI A YK+VSLN L++ + A N R+ +F + DDD
Sbjct: 507 FSRYLHTKQRGIPAKVYKVVSLNSCLEVCAGNPTC-AGANYNRRLGDCTLFDAI--DDDA 563
Query: 404 E 406
E
Sbjct: 564 E 564
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 29.1 bits (62), Expect = 2.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 269 CQLGCRQICTADGCRTKEQAPSP 201
CQ C+Q C C T+ AP+P
Sbjct: 103 CQSSCQQTCQTSSCYTQIAAPAP 125
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 29.1 bits (62), Expect = 2.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 269 CQLGCRQICTADGCRTKEQAPSP 201
CQ C+Q C C T+ AP+P
Sbjct: 104 CQSSCQQTCQTSSCYTQIAAPAP 126
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical
protein C04A11.3 protein.
Length = 1228
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 510 SIPSKPYCSARRRAELVKAVRACGDSNKRLYFCGSSVSSSPPT 382
S P+K S +RAE ++VR G SN + SS + PT
Sbjct: 675 STPTKTRASPPKRAESNQSVRTSGSSNSVVQHSASSSTDYVPT 717
>Z70035-13|CAA93874.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.11 protein.
Length = 432
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +2
Query: 362 QLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDL 514
++++ ++GG D+++ ++ ++ S + F S L E Y DG+DL
Sbjct: 135 KIKLMFSIGGKDNSK---YFSSVIPSEERIQTFIESILEFLEAYDLDGVDL 182
>Z47745-6|CAA87667.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.11 protein.
Length = 432
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +2
Query: 362 QLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDL 514
++++ ++GG D+++ ++ ++ S + F S L E Y DG+DL
Sbjct: 135 KIKLMFSIGGKDNSK---YFSSVIPSEERIQTFIESILEFLEAYDLDGVDL 182
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 290 NENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLES 439
N D+D AH + R++ + + Q+ R L + D KY L + S
Sbjct: 1780 NLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIAS 1829
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 290 NENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLES 439
N D+D AH + R++ + + Q+ R L + D KY L + S
Sbjct: 1853 NLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIAS 1902
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 290 NENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLES 439
N D+D AH + R++ + + Q+ R L + D KY L + S
Sbjct: 1853 NLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIAS 1902
>AL110490-9|CAB54453.2| 607|Caenorhabditis elegans Hypothetical
protein Y48B6A.8 protein.
Length = 607
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 291 LSETILYVSAWMPADLYS 238
+SE LYV+ W PAD Y+
Sbjct: 116 VSEDCLYVNIWAPADAYN 133
>AF039650-1|AAC14022.3| 607|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 607
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 291 LSETILYVSAWMPADLYS 238
+SE LYV+ W PAD Y+
Sbjct: 116 VSEDCLYVNIWAPADAYN 133
>AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical
protein W08E12.2 protein.
Length = 120
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 245 CTADGCRTKEQAPSP*AAYVLEIL*YSSCCHSSRGLCFGY 126
C+ + C AP +Y YSSCC+S+ C GY
Sbjct: 65 CSCNPCNGGGCAPR--CSYCPNNFGYSSCCNSNNFSCCGY 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,057,474
Number of Sequences: 27780
Number of extensions: 211976
Number of successful extensions: 647
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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