Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_E11
         (479 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       29   0.11 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    26   0.77 
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   3.1  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   5.4  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    22   9.5  

>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 28.7 bits (61), Expect = 0.11
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 156 PKQELVVLRGMDPKQREDCRVRHPAPRTKDGSNLHRQLDRYPGAVQ 293
           PK +   ++  +  Q ED  +R PAP   +      Q  + PGA+Q
Sbjct: 63  PKSQQETIKTYEKIQFEDSSLRFPAPNQNEQQQPRPQPPKTPGAMQ 108


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.8 bits (54), Expect = 0.77
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
 Frame = -3

Query: 354 GVPVQESLASEHSGELFRDALEQLLDSGRVADEGCCHL*SAGRDV----AHGSLHVVWDP 187
           GVPV   +      EL    LE + DS   +++    + S G+D+    A  +L+V+ DP
Sbjct: 81  GVPVPVRMQGSFPPELASTPLEDI-DSF-YSNQRTFVVISKGKDIFRFSATNALYVL-DP 137

Query: 186 FHEVRRVLVLDVKHLL 139
           F+ +RRV +  + H L
Sbjct: 138 FNPIRRVAIYILVHPL 153


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 376 ELTEAESNMNDLVSEYQQ 429
           EL + E+N+N +VSE Q+
Sbjct: 703 ELKQTEANINSIVSEMQK 720


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 78  VTRVTRRHHVLSVEHLLRELGD 13
           V  +T RH +  ++H LR  GD
Sbjct: 288 VIPITTRHFIYEIKHPLRLRGD 309


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 347 QCKKALRLNIAVNC 306
           QC KAL L+I + C
Sbjct: 341 QCHKALHLDIGLRC 354


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,699
Number of Sequences: 2352
Number of extensions: 7791
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)