Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_E11
(479 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 298 1e-81
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 295 1e-80
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 295 1e-80
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 295 1e-80
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 293 6e-80
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 292 8e-80
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 163 6e-41
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 163 6e-41
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 115 2e-26
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 115 2e-26
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 115 2e-26
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 115 2e-26
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 112 1e-25
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 112 1e-25
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 111 2e-25
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 111 2e-25
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 111 3e-25
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 111 3e-25
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 111 3e-25
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 109 8e-25
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 109 8e-25
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 106 7e-24
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 106 7e-24
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 97 4e-21
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 60 1e-09
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 29 1.7
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 29 1.7
Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z19555-1|CAA79618.1| 608|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 27 5.3
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 27 5.3
Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical pr... 27 7.0
U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical pr... 27 7.0
AC006708-7|ABM01863.1| 168|Caenorhabditis elegans Hypothetical ... 27 7.0
Z75527-1|CAA99774.1| 441|Caenorhabditis elegans Hypothetical pr... 27 9.3
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 298 bits (732), Expect = 1e-81
Identities = 137/142 (96%), Positives = 141/142 (99%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
TVPELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQMLN+QNKNSSYFVEW
Sbjct: 285 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEW 344
Query: 190 IPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 369
IPNNVKTAVCDIPPRG+KMAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD
Sbjct: 345 IPNNVKTAVCDIPPRGVKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
Query: 370 EMELTEAESNMNDLVSEYQQYQ 435
EME TEAESNMNDLVSEYQQYQ
Sbjct: 405 EMEFTEAESNMNDLVSEYQQYQ 426
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 295 bits (724), Expect = 1e-80
Identities = 137/142 (96%), Positives = 139/142 (97%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
TVPELTQQ FDAKNMMAACDPRHGRYLT AAIFRGRMSMKEVDEQMLNIQNKNSSYFV+W
Sbjct: 285 TVPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDW 344
Query: 190 IPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 369
IPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD
Sbjct: 345 IPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
Query: 370 EMELTEAESNMNDLVSEYQQYQ 435
EME TEAESNMNDLVSEYQQYQ
Sbjct: 405 EMEFTEAESNMNDLVSEYQQYQ 426
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 295 bits (724), Expect = 1e-80
Identities = 137/142 (96%), Positives = 139/142 (97%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
TVPELTQQ FDAKNMMAACDPRHGRYLT AAIFRGRMSMKEVDEQMLNIQNKNSSYFV+W
Sbjct: 285 TVPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDW 344
Query: 190 IPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 369
IPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD
Sbjct: 345 IPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
Query: 370 EMELTEAESNMNDLVSEYQQYQ 435
EME TEAESNMNDLVSEYQQYQ
Sbjct: 405 EMEFTEAESNMNDLVSEYQQYQ 426
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 295 bits (723), Expect = 1e-80
Identities = 135/142 (95%), Positives = 140/142 (98%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
TV ELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVDEQMLN+QNKNSSYFVEW
Sbjct: 285 TVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEW 344
Query: 190 IPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 369
IPNNVKTAVCDIPPRGLKMAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD
Sbjct: 345 IPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
Query: 370 EMELTEAESNMNDLVSEYQQYQ 435
EME TEAESNMNDL+SEYQQYQ
Sbjct: 405 EMEFTEAESNMNDLISEYQQYQ 426
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 293 bits (718), Expect = 6e-80
Identities = 134/142 (94%), Positives = 140/142 (98%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
TV ELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVDEQML++QNKNSSYFVEW
Sbjct: 285 TVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLSVQNKNSSYFVEW 344
Query: 190 IPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 369
IPNNVKTAVCDIPPRGLKMAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD
Sbjct: 345 IPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
Query: 370 EMELTEAESNMNDLVSEYQQYQ 435
EME TEAESNMNDL+SEYQQYQ
Sbjct: 405 EMEFTEAESNMNDLISEYQQYQ 426
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 292 bits (717), Expect = 8e-80
Identities = 134/142 (94%), Positives = 140/142 (98%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
TV ELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVD+QM+N+QNKNSSYFVEW
Sbjct: 285 TVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDDQMMNVQNKNSSYFVEW 344
Query: 190 IPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 369
IPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD
Sbjct: 345 IPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
Query: 370 EMELTEAESNMNDLVSEYQQYQ 435
EME TEAESNMNDLVSEYQQYQ
Sbjct: 405 EMEFTEAESNMNDLVSEYQQYQ 426
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 163 bits (396), Expect = 6e-41
Identities = 75/142 (52%), Positives = 108/142 (76%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
++ +LTQQ+ DAKN+M C+ G++L+ A I+RG+ + K+ EQ+++++N++ S +E
Sbjct: 284 SISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIES 342
Query: 190 IPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 369
+P + T VCDIP RGLK +ATFI NSTAIQE KRIS+QF +FRRKAFLHWYT M+
Sbjct: 343 LPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---ME 399
Query: 370 EMELTEAESNMNDLVSEYQQYQ 435
E E T+AE+ +NDL+SE+QQY+
Sbjct: 400 ESEFTDAENKVNDLISEFQQYE 421
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 163 bits (396), Expect = 6e-41
Identities = 75/142 (52%), Positives = 108/142 (76%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
++ +LTQQ+ DAKN+M C+ G++L+ A I+RG+ + K+ EQ+++++N++ S +E
Sbjct: 284 SISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIES 342
Query: 190 IPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 369
+P + T VCDIP RGLK +ATFI NSTAIQE KRIS+QF +FRRKAFLHWYT M+
Sbjct: 343 LPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---ME 399
Query: 370 EMELTEAESNMNDLVSEYQQYQ 435
E E T+AE+ +NDL+SE+QQY+
Sbjct: 400 ESEFTDAENKVNDLISEFQQYE 421
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 115 bits (276), Expect = 2e-26
Identities = 53/148 (35%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
+V E+T F+ N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W
Sbjct: 287 SVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDW 346
Query: 190 IPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLH 345
P K + PP + A + N+TAI E + R+ +F M+ ++AF+H
Sbjct: 347 CPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVH 406
Query: 346 WYTGEGMDEMELTEAESNMNDLVSEYQQ 429
WY GEGM+E E +EA ++ L +Y++
Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 115 bits (276), Expect = 2e-26
Identities = 53/148 (35%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
+V E+T F+ N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W
Sbjct: 286 SVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDW 345
Query: 190 IPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLH 345
P K + PP + A + N+TAI E + R+ +F M+ ++AF+H
Sbjct: 346 CPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVH 405
Query: 346 WYTGEGMDEMELTEAESNMNDLVSEYQQ 429
WY GEGM+E E +EA ++ L +Y++
Sbjct: 406 WYVGEGMEEGEFSEAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 115 bits (276), Expect = 2e-26
Identities = 53/148 (35%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
+V E+T F+ N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W
Sbjct: 287 SVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDW 346
Query: 190 IPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLH 345
P K + PP + A + N+TAI E + R+ +F M+ ++AF+H
Sbjct: 347 CPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVH 406
Query: 346 WYTGEGMDEMELTEAESNMNDLVSEYQQ 429
WY GEGM+E E +EA ++ L +Y++
Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 115 bits (276), Expect = 2e-26
Identities = 53/148 (35%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
+V E+T F+ N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W
Sbjct: 287 SVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDW 346
Query: 190 IPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLH 345
P K + PP + A + N+TAI E + R+ +F M+ ++AF+H
Sbjct: 347 CPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVH 406
Query: 346 WYTGEGMDEMELTEAESNMNDLVSEYQQ 429
WY GEGM+E E +EA ++ L +Y++
Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 112 bits (270), Expect = 1e-25
Identities = 51/148 (34%), Positives = 86/148 (58%), Gaps = 8/148 (5%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
+V E+T+ F+A N M CDP+HG+Y+ V ++RG + K+V + +I+ + S FV+W
Sbjct: 282 SVDEITKSCFEASNQMVKCDPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQRSVQFVDW 341
Query: 190 IPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLH 345
P K + PP + A + N+TAI E ++R+ +F M+ ++AF+H
Sbjct: 342 CPTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLSNTTAIAEAWQRLDYKFDLMYAKRAFVH 401
Query: 346 WYTGEGMDEMELTEAESNMNDLVSEYQQ 429
WY GEGM+E E +EA ++ L +Y++
Sbjct: 402 WYVGEGMEEGEFSEAREDLAALEKDYEE 429
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 112 bits (270), Expect = 1e-25
Identities = 52/148 (35%), Positives = 84/148 (56%), Gaps = 8/148 (5%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
TV E+TQQ F+ M CDPR G+Y+ ++RG + K+V+ + +++ K S FV+W
Sbjct: 292 TVAEITQQCFEPGAQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASVKTKRSIQFVDW 351
Query: 190 IPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLH 345
P K + PP L+ A + N+TAI E + R+ +F M+ ++AF+H
Sbjct: 352 CPTGFKVGINYQPPTVVPGADLSKLQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVH 411
Query: 346 WYTGEGMDEMELTEAESNMNDLVSEYQQ 429
WY GEGM+E E +EA ++ L +Y++
Sbjct: 412 WYVGEGMEEGEFSEAREDLAALEKDYEE 439
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 111 bits (268), Expect = 2e-25
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
+V ++T F+ N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W
Sbjct: 285 SVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDW 344
Query: 190 IPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLH 345
P K + PP + A + N+TAI E + R+ +F M+ ++AF+H
Sbjct: 345 CPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVH 404
Query: 346 WYTGEGMDEMELTEAESNMNDLVSEYQQ 429
WY GEGM+E E TEA ++ L +Y++
Sbjct: 405 WYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 111 bits (268), Expect = 2e-25
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
+V ++T F+ N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W
Sbjct: 285 SVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDW 344
Query: 190 IPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLH 345
P K + PP + A + N+TAI E + R+ +F M+ ++AF+H
Sbjct: 345 CPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVH 404
Query: 346 WYTGEGMDEMELTEAESNMNDLVSEYQQ 429
WY GEGM+E E TEA ++ L +Y++
Sbjct: 405 WYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 111 bits (267), Expect = 3e-25
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
+V ++T F+ N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W
Sbjct: 285 SVNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDW 344
Query: 190 IPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLH 345
P K + PP + A + N+TAI E + R+ +F M+ ++AF+H
Sbjct: 345 CPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVH 404
Query: 346 WYTGEGMDEMELTEAESNMNDLVSEYQQ 429
WY GEGM+E E TEA ++ L +Y++
Sbjct: 405 WYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 111 bits (267), Expect = 3e-25
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
+V ++T F+ N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W
Sbjct: 285 SVNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDW 344
Query: 190 IPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLH 345
P K + PP + A + N+TAI E + R+ +F M+ ++AF+H
Sbjct: 345 CPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVH 404
Query: 346 WYTGEGMDEMELTEAESNMNDLVSEYQQ 429
WY GEGM+E E TEA ++ L +Y++
Sbjct: 405 WYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 111 bits (266), Expect = 3e-25
Identities = 51/148 (34%), Positives = 84/148 (56%), Gaps = 8/148 (5%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
+V E+T F+ + M CDPR+G+Y+ ++RG + KE++ + I+ K + FV+W
Sbjct: 287 SVSEITNVCFEPGSQMVKCDPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRAIQFVDW 346
Query: 190 IPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLH 345
P K + PP L+ A + N+TAIQE + R+ +F M+ ++AF+H
Sbjct: 347 CPTGFKVGINYQPPTVVPGGDMAKLQRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAFVH 406
Query: 346 WYTGEGMDEMELTEAESNMNDLVSEYQQ 429
WY GEGM+E E +EA +M L +Y++
Sbjct: 407 WYVGEGMEEGEFSEAREDMAALEKDYEE 434
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 109 bits (263), Expect = 8e-25
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
+V ++T F+ N M CDPR+G+Y+ V ++RG + K+V+ + I+ K S FV+W
Sbjct: 285 SVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDW 344
Query: 190 IPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLH 345
P K + PP + A + N+TAI E + R+ +F M+ ++AF+H
Sbjct: 345 CPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVH 404
Query: 346 WYTGEGMDEMELTEAESNMNDLVSEYQQ 429
WY GEGM+E E TEA ++ L +Y++
Sbjct: 405 WYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 109 bits (263), Expect = 8e-25
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
+V ++T F+ N M CDPR+G+Y+ V ++RG + K+V+ + I+ K S FV+W
Sbjct: 285 SVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDW 344
Query: 190 IPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLH 345
P K + PP + A + N+TAI E + R+ +F M+ ++AF+H
Sbjct: 345 CPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVH 404
Query: 346 WYTGEGMDEMELTEAESNMNDLVSEYQQ 429
WY GEGM+E E TEA ++ L +Y++
Sbjct: 405 WYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 106 bits (255), Expect = 7e-24
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Frame = +1
Query: 4 RGTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFV 183
+ TV ++T F+ M CDPR G+Y+ V ++RG + K+++ + ++ K + FV
Sbjct: 291 QNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFV 350
Query: 184 EWIPNNVKTAVCDIPPRGLK--------MAATFIGNSTAIQELFKRISEQFTAMFRRKAF 339
EW P K + PP + + I N+TAI E + R+ +F M+ ++AF
Sbjct: 351 EWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAF 410
Query: 340 LHWYTGEGMDEMELTEAESNMNDLVSEYQQ 429
+HWY GEGM+E E +EA +M L +Y++
Sbjct: 411 VHWYVGEGMEEGEFSEAREDMAALEKDYEE 440
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 106 bits (255), Expect = 7e-24
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Frame = +1
Query: 4 RGTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFV 183
+ TV ++T F+ M CDPR G+Y+ V ++RG + K+++ + ++ K + FV
Sbjct: 263 QNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFV 322
Query: 184 EWIPNNVKTAVCDIPPRGLK--------MAATFIGNSTAIQELFKRISEQFTAMFRRKAF 339
EW P K + PP + + I N+TAI E + R+ +F M+ ++AF
Sbjct: 323 EWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAF 382
Query: 340 LHWYTGEGMDEMELTEAESNMNDLVSEYQQ 429
+HWY GEGM+E E +EA +M L +Y++
Sbjct: 383 VHWYVGEGMEEGEFSEAREDMAALEKDYEE 412
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 97.5 bits (232), Expect = 4e-21
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 8/148 (5%)
Frame = +1
Query: 10 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
+V ++T F+ N M CDP G+Y+ V ++RG + K+V+ + +++ K FV+W
Sbjct: 290 SVQDITHMCFEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDW 349
Query: 190 IPNNVKTAV---CDIPPRG-----LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLH 345
P K + I G + A + N+TAI E + R+ +F M+ ++AF+H
Sbjct: 350 CPTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVH 409
Query: 346 WYTGEGMDEMELTEAESNMNDLVSEYQQ 429
W+ GEGM+E E EA ++ L +Y +
Sbjct: 410 WFVGEGMEEGEFMEARDDLAALEKDYAE 437
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 59.7 bits (138), Expect = 1e-09
Identities = 23/57 (40%), Positives = 39/57 (68%)
Frame = +1
Query: 259 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMELTEAESNMNDLVSEYQQ 429
+ ++TAI E + R+ +F M+ ++AF+HWY GEGM+E E TEA ++ L +Y++
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +1
Query: 241 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMELTEAESNMN---DL 411
K++ + NST++ LF+ + ++ + ++AF+ + E +D L + M+ DL
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDL 427
Query: 412 VSEYQ 426
+ EY+
Sbjct: 428 LDEYK 432
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +1
Query: 241 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMELTEAESNMN---DL 411
K++ + NST++ LF+ + ++ + ++AF+ + E +D L + M+ DL
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDL 427
Query: 412 VSEYQ 426
+ EY+
Sbjct: 428 LDEYK 432
>Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical
protein C49A1.5 protein.
Length = 498
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -1
Query: 329 RLNIAVNCSEMRLNSSWIAVELPMKVAAIFSPR 231
R N N ++++ S+ ++VE+P K+A +P+
Sbjct: 117 RTNTVDNLEKIKIESNGVSVEIPFKIARYTAPK 149
>Z19555-1|CAA79618.1| 608|Caenorhabditis elegans Hypothetical
protein F02A9.4a protein.
Length = 608
Score = 27.9 bits (59), Expect = 4.0
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 153 HPKQELVVLRGMDPKQREDCRVRHPAPRTKDGSNLHRQLDRYPGAVQAHLGTVHRYVQTQ 332
+P +E+ + G + K+ D VR R DGS H +RY + T+ Y Q
Sbjct: 357 YPAEEIYGIVGSNLKKTYD--VREVIARIVDGSRFHEFKERYGETLVTGFATI--YGQRV 412
Query: 333 GFLA 344
G LA
Sbjct: 413 GILA 416
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 27.5 bits (58), Expect = 5.3
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
Frame = +1
Query: 217 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT-GEGMDEM 375
C I PR + T I N T +QEL K I E+ R+ + W T D+
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 376 ELTEAESNMNDLVSEY 423
E E +++D+ ++
Sbjct: 743 EEWNDEEDLSDVGEDF 758
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 27.5 bits (58), Expect = 5.3
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
Frame = +1
Query: 217 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT-GEGMDEM 375
C I PR + T I N T +QEL K I E+ R+ + W T D+
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 376 ELTEAESNMNDLVSEY 423
E E +++D+ ++
Sbjct: 743 EEWNDEEDLSDVGEDF 758
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 27.5 bits (58), Expect = 5.3
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
Frame = +1
Query: 217 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT-GEGMDEM 375
C I PR + T I N T +QEL K I E+ R+ + W T D+
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 376 ELTEAESNMNDLVSEY 423
E E +++D+ ++
Sbjct: 743 EEWNDEEDLSDVGEDF 758
>Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical
protein ZK669.4 protein.
Length = 448
Score = 27.1 bits (57), Expect = 7.0
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +1
Query: 244 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMELTEAESNMNDLVSEY 423
MAA +G S+ I +L K + A F GEG+ E+++ E D +S++
Sbjct: 2 MAARLLGTSSRIFKLNKHLHTSKVAFMPVVQFKLSDIGEGIAEVQVKEWYVKEGDTISQF 61
Query: 424 QQ 429
+
Sbjct: 62 DK 63
>U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical
protein B0416.4 protein.
Length = 218
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 91 TVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 189
T + R RM +K+VDE++L K + EW
Sbjct: 119 TFKQMVRDRMKVKDVDEKLLQQYMKKENVEFEW 151
>AC006708-7|ABM01863.1| 168|Caenorhabditis elegans Hypothetical
protein Y110A7A.21 protein.
Length = 168
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 227 GMSHTAVFTLFGIHSTKYDEFLFWMLSICSSTSFI 123
G S + +F I+ T+ DE++FW SS SF+
Sbjct: 64 GSSVFLLCDVFNINETEPDEWVFWESVFISSFSFL 98
>Z75527-1|CAA99774.1| 441|Caenorhabditis elegans Hypothetical
protein C15C8.1 protein.
Length = 441
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 226 PPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMELT 384
P GL + T NST +++ K + ++ +KAF G G+ +E++
Sbjct: 7 PVPGLPLLTTLFCNSTTVKKKVKISCDFPDELYTKKAFYGGPIGAGLSAIEVS 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,463,551
Number of Sequences: 27780
Number of extensions: 157693
Number of successful extensions: 621
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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