Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_E10
(469 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 235 6e-64
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 25 1.7
DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor prot... 24 3.0
EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein. 23 5.3
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 23 5.3
EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein. 23 7.0
EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein. 23 7.0
EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein. 23 7.0
EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein. 23 7.0
EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein. 23 7.0
EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein. 23 7.0
EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein. 23 7.0
EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein. 23 7.0
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 7.0
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 23 7.0
U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic aci... 22 9.3
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 22 9.3
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 235 bits (575), Expect = 6e-64
Identities = 105/136 (77%), Positives = 117/136 (86%)
Frame = +3
Query: 60 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 239
MGFVKVVKNKQYFKRYQV+F+RRREGKTDYYARKRL+ QDKNKYNTPK+RLIVRLSN+D+
Sbjct: 1 MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60
Query: 240 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 419
TCQ+AY RIEGD IVCAAYSHELPRYG+KVGLTNYAAAYCTG D+LY
Sbjct: 61 TCQIAYRRIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYA 120
Query: 420 GATEVTGDDYNVEPVD 467
G T+VTG++Y VEPVD
Sbjct: 121 GCTDVTGEEYLVEPVD 136
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 24.6 bits (51), Expect = 1.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3
Query: 467 VNWFNIIVITSDFSGTCVETVQAEPLQQSSCQQQTSAVGSSIVS 336
+N FN+ V G C V P Q + ++AVGS+I S
Sbjct: 310 LNLFNMDVTKKCLIGECWVPVPDLPKVQKALSDGSAAVGSTIPS 353
>DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor
protein.
Length = 344
Score = 23.8 bits (49), Expect = 3.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 217 TISRYFGVLYLFLSWTTRRL 158
TI RYF + + FLS T +L
Sbjct: 141 TIERYFAICHPFLSHTMSKL 160
>EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.0 bits (47), Expect = 5.3
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -2
Query: 225 ITVQSVGTLECCICFYPGQRGVCEHSSQ 142
+ QSV L C C P C+ S+Q
Sbjct: 19 LLAQSVSALRCYQCASPSSWSDCQASAQ 46
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.0 bits (47), Expect = 5.3
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -3
Query: 371 QQTSAVGSSIVSQTHLDTIAWEFM 300
++ SA+ + VSQ+ ++T WE +
Sbjct: 170 ERKSAIDLTFVSQSLMETTGWEVL 193
>EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 7.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 216 QSVGTLECCICFYPGQRGVCEHSSQ 142
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 7.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 216 QSVGTLECCICFYPGQRGVCEHSSQ 142
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 7.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 216 QSVGTLECCICFYPGQRGVCEHSSQ 142
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 7.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 216 QSVGTLECCICFYPGQRGVCEHSSQ 142
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 7.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 216 QSVGTLECCICFYPGQRGVCEHSSQ 142
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 7.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 216 QSVGTLECCICFYPGQRGVCEHSSQ 142
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 7.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 216 QSVGTLECCICFYPGQRGVCEHSSQ 142
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 7.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 216 QSVGTLECCICFYPGQRGVCEHSSQ 142
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 22.6 bits (46), Expect = 7.0
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 127 VVREKLTTMLANASLSRIKTNTTLQSTD 210
V+RE L + + +KTN +STD
Sbjct: 1983 VMREALVNLTRESCYQIVKTNEVPESTD 2010
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 22.6 bits (46), Expect = 7.0
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 99 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYR 209
KR+ V R GK++++ + V+ D+ + P+ R
Sbjct: 25 KRHNVVVGRNGSGKSNFFYAIQFVLSDEFTHLRPEQR 61
>U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic acid
binding protein protein.
Length = 388
Score = 22.2 bits (45), Expect = 9.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 446 VITSDFSGTCVETVQAEPLQQSSC 375
VIT DF+ + AEPL+ + C
Sbjct: 5 VITRDFAMAAICFSCAEPLEATGC 28
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 22.2 bits (45), Expect = 9.3
Identities = 17/65 (26%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = -2
Query: 456 QHYSHHQ*LQWH-LCRDCPSRASATIFLPATDQCSRQQHS*SNPP*YHSVGVHESRQHRQ 280
Q Q L W + R CPS+ + Q +QQ PP + Q +Q
Sbjct: 410 QQQQQPQQLLWTTVVRSCPSQRQRQLQQQQQQQQQQQQGERYVPPQLRQQRQQQQPQQQQ 469
Query: 279 CDHPQ 265
PQ
Sbjct: 470 QQRPQ 474
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,076
Number of Sequences: 2352
Number of extensions: 9960
Number of successful extensions: 50
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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