Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_E09
         (448 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   1.2  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   1.2  
U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...    24   2.1  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   2.8  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   3.7  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    23   6.5  
AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical prote...    22   8.6  
AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosens...    22   8.6  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +3

Query: 318  VNTLEEFYVQLENCVSDLDRVMEKL-SVAEEFE 413
            ++TLE+        +  LDRV EK+ S  EEFE
Sbjct: 1014 LDTLEKIQTPNMKAMQKLDRVTEKIQSTNEEFE 1046


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -2

Query: 438 IQPLVPRYIQIPLQH*ASP*LYPS--QKRNSPIARKILP 328
           ++PL+P+  Q P Q    P L+P+    R  PIA +  P
Sbjct: 135 VRPLLPQQQQHPHQRDTGPALFPAPISHRPPPIAHQQAP 173


>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 398 NTELLHNSIQVRNAILQLHVKFFQSIYETDF 306
           N EL+     V+NAI+ +    F+  YE+ +
Sbjct: 16  NNELIRTKTLVKNAIIVIDASPFRQWYESHY 46


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +3

Query: 327 LEEFYVQLENCVSDLD 374
           LE F+V L+N V++LD
Sbjct: 93  LERFHVMLDNLVAELD 108


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 3.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 421  TIHSNSSATLSFSITLSKSETQFS 350
            T H+   + LSF+IT+  SE+  S
Sbjct: 1440 TTHTADGSKLSFNITIKPSESHTS 1463


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = +3

Query: 279 VGQDMFSNGKVCFVN--TLEEFYVQLENCVSDLDRVMEKLSVAEEFECIVEL 428
           +  +M +N  V  +   T+E ++     C   L   M KLS A  F C++ L
Sbjct: 124 IAAEMSANATVLTITAFTIERYFAI---CHPFLSHTMSKLSRAVRFICVIWL 172


>AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical protein
           protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 342 RKILPEYLRNRLFRC*TYPVQQ 277
           ++ILPE LR +  RC   P+Q+
Sbjct: 68  KRILPEALRTKCARC--SPIQK 87


>AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosensory
           protein CSP5 protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 342 RKILPEYLRNRLFRC*TYPVQQ 277
           ++ILPE LR +  RC   P+Q+
Sbjct: 68  KRILPEALRTKCARC--SPIQK 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,610
Number of Sequences: 2352
Number of extensions: 9237
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37843779
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)