Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_E09
(448 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39999-7|AAY44012.1| 232|Caenorhabditis elegans Hypothetical pr... 29 1.2
U39999-6|AAA81107.2| 198|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical pr... 29 1.5
AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math ... 29 1.5
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 29 2.0
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 28 3.6
U39999-9|AAY44013.1| 122|Caenorhabditis elegans Hypothetical pr... 28 3.6
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 28 3.6
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 28 3.6
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 28 3.6
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 28 3.6
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 28 3.6
Z81048-3|CAB02841.1| 407|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z29117-12|CAE17731.1| 179|Caenorhabditis elegans Hypothetical p... 27 4.7
Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical pr... 27 6.2
U42831-1|AAA83513.2| 614|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 27 6.2
AC084159-14|AAK39369.2| 480|Caenorhabditis elegans Hypothetical... 27 6.2
AC024138-1|AAU05565.1| 319|Caenorhabditis elegans Hypothetical ... 27 6.2
Z78239-2|CAI79140.1| 189|Caenorhabditis elegans Hypothetical pr... 27 8.2
>U39999-7|AAY44012.1| 232|Caenorhabditis elegans Hypothetical
protein F41G3.20 protein.
Length = 232
Score = 29.5 bits (63), Expect = 1.2
Identities = 19/90 (21%), Positives = 36/90 (40%)
Frame = -1
Query: 427 SSTIHSNSSATLSFSITLSKSETQFSNCT*NSSRVFTKQTFPLLNISCPTGRGLSGVGCS 248
++T+ + ++ T + + L+ T S+C +S L+ CP G +
Sbjct: 70 TTTVATTTATTATTCVDLTNPSTGVSDCPGMASYCANSAYLTLMKQQCPKTCGYCTSSSA 129
Query: 247 SHRPTSSSVTDLPSRYNSTMDISPAAINCT 158
+ +SS+ DL + D A CT
Sbjct: 130 TTTSSSSTCIDLTNASTGVSDCPGMASYCT 159
Score = 28.3 bits (60), Expect = 2.7
Identities = 25/88 (28%), Positives = 39/88 (44%)
Frame = -1
Query: 433 TVSSTIHSNSSATLSFSITLSKSETQFSNCT*NSSRVFTKQTFPLLNISCPTGRGLSGVG 254
T SS ++SS+T I L+ + T S+C +S L+ CP G
Sbjct: 125 TSSSATTTSSSSTC---IDLTNASTGVSDCPGMASYCTNSAYLTLMKQQCPKTCGY---- 177
Query: 253 CSSHRPTSSSVTDLPSRYNSTMDISPAA 170
C+S +SSS + NS++ +S A
Sbjct: 178 CTSSSSSSSSSSTCADLVNSSIGVSNCA 205
>U39999-6|AAA81107.2| 198|Caenorhabditis elegans Hypothetical
protein F41G3.10 protein.
Length = 198
Score = 29.5 bits (63), Expect = 1.2
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = -1
Query: 412 SNSSATLSFSITLSKSETQFSNCT*NSSRVFTKQTFPLLNISCPTGRGLSGVGCSSHRPT 233
+ +S T + L+ T S+CT +S F L+ CP G G ++ T
Sbjct: 38 TRTSVTSGTCVDLTNPSTGTSDCTRMASYCFNSFYLTLMRQQCPRTCGYC-TGTATTTRT 96
Query: 232 SSSVTDLPSRYNSTMDISPAAINC 161
S++ DL + D + A C
Sbjct: 97 STTCVDLTNPTTGVSDCTRMASYC 120
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical protein
K04H4.2c protein.
Length = 1446
Score = 29.1 bits (62), Expect = 1.5
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Frame = -1
Query: 304 PLLNISCPTGRGLSGVGCSSHRPTSSSVTDLPS-------RYNSTMDI-SPAAINCTLKI 149
P +N CPTG + G C S T S T LPS Y+ T + PA++ CT +I
Sbjct: 1059 PTINGLCPTGYTVQGNLCCSATCTDGS-TGLPSVNGVCIDGYSLTNGVCCPASVTCTDEI 1117
Query: 148 -VAPSAANSLN 119
+ P N
Sbjct: 1118 SIGPCTGTGFN 1128
>Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical
protein K04H4.2b protein.
Length = 788
Score = 29.1 bits (62), Expect = 1.5
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Frame = -1
Query: 304 PLLNISCPTGRGLSGVGCSSHRPTSSSVTDLPS-------RYNSTMDI-SPAAINCTLKI 149
P +N CPTG + G C S T S T LPS Y+ T + PA++ CT +I
Sbjct: 401 PTINGLCPTGYTVQGNLCCSATCTDGS-TGLPSVNGVCIDGYSLTNGVCCPASVTCTDEI 459
Query: 148 -VAPSAANSLN 119
+ P N
Sbjct: 460 SIGPCTGTGFN 470
>Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical
protein K04H4.2a protein.
Length = 628
Score = 29.1 bits (62), Expect = 1.5
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Frame = -1
Query: 304 PLLNISCPTGRGLSGVGCSSHRPTSSSVTDLPS-------RYNSTMDI-SPAAINCTLKI 149
P +N CPTG + G C S T S T LPS Y+ T + PA++ CT +I
Sbjct: 401 PTINGLCPTGYTVQGNLCCSATCTDGS-TGLPSVNGVCIDGYSLTNGVCCPASVTCTDEI 459
Query: 148 -VAPSAANSLN 119
+ P N
Sbjct: 460 SIGPCTGTGFN 470
>AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math
domain containingprotein 47 protein.
Length = 683
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 368 VRNAILQLHVKFFQSIYETDFSVAEHILSN 279
V AIL H +FQS++ D + EHI+S+
Sbjct: 29 VSRAILSEHCTYFQSLFCGDSNYQEHIISD 58
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 28.7 bits (61), Expect = 2.0
Identities = 25/110 (22%), Positives = 49/110 (44%)
Frame = -1
Query: 436 PTVSSTIHSNSSATLSFSITLSKSETQFSNCT*NSSRVFTKQTFPLLNISCPTGRGLSGV 257
PT +STI +SA + +IT S + S T S+ + T + + + P S V
Sbjct: 174 PTTTSTITPTTSADPTSTITTSTTPNPSSPSTVQSTTT-AEPTSTITSTTVPESSTTSVV 232
Query: 256 GCSSHRPTSSSVTDLPSRYNSTMDISPAAINCTLKIVAPSAANSLNFISD 107
++ +S++T +ST + + + T ++ S +++ SD
Sbjct: 233 QSTTTAEPTSTITSTTVPESST-SLLTSTLASTTTLIPTSTMSTITLTSD 281
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 27.9 bits (59), Expect = 3.6
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 60 KCALQKPRDINSWSRKSEIKFNELAAEGATIFNVQFIAAGDIS--IVELYLEGKSVTEEL 233
K L+ R N + ++++F +A E + + + + I + EGK + EE+
Sbjct: 3353 KSQLKHQRITNEEASANKVQFRNVAGEAKKVARQLGMEGNEANEKISDTVDEGKELVEEV 3412
Query: 234 VGLCEEH-PTPERPLPVGQDMFS 299
+ LC + T ER L + + + S
Sbjct: 3413 MALCADRTETLERALALMEQLTS 3435
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 27.9 bits (59), Expect = 3.6
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 60 KCALQKPRDINSWSRKSEIKFNELAAEGATIFNVQFIAAGDIS--IVELYLEGKSVTEEL 233
K L+ R N + ++++F +A E + + + + I + EGK + EE+
Sbjct: 3353 KSQLKHQRITNEEASANKVQFRNVAGEAKKVARQLGMEGNEANEKISDTVDEGKELVEEV 3412
Query: 234 VGLCEEH-PTPERPLPVGQDMFS 299
+ LC + T ER L + + + S
Sbjct: 3413 MALCADRTETLERALALMEQLTS 3435
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 27.9 bits (59), Expect = 3.6
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 60 KCALQKPRDINSWSRKSEIKFNELAAEGATIFNVQFIAAGDIS--IVELYLEGKSVTEEL 233
K L+ R N + ++++F +A E + + + + I + EGK + EE+
Sbjct: 2808 KSQLKHQRITNEEASANKVQFRNVAGEAKKVARQLGMEGNEANEKISDTVDEGKELVEEV 2867
Query: 234 VGLCEEH-PTPERPLPVGQDMFS 299
+ LC + T ER L + + + S
Sbjct: 2868 MALCADRTETLERALALMEQLTS 2890
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 27.9 bits (59), Expect = 3.6
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 60 KCALQKPRDINSWSRKSEIKFNELAAEGATIFNVQFIAAGDIS--IVELYLEGKSVTEEL 233
K L+ R N + ++++F +A E + + + + I + EGK + EE+
Sbjct: 3353 KSQLKHQRITNEEASANKVQFRNVAGEAKKVARQLGMEGNEANEKISDTVDEGKELVEEV 3412
Query: 234 VGLCEEH-PTPERPLPVGQDMFS 299
+ LC + T ER L + + + S
Sbjct: 3413 MALCADRTETLERALALMEQLTS 3435
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 27.9 bits (59), Expect = 3.6
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 60 KCALQKPRDINSWSRKSEIKFNELAAEGATIFNVQFIAAGDIS--IVELYLEGKSVTEEL 233
K L+ R N + ++++F +A E + + + + I + EGK + EE+
Sbjct: 3353 KSQLKHQRITNEEASANKVQFRNVAGEAKKVARQLGMEGNEANEKISDTVDEGKELVEEV 3412
Query: 234 VGLCEEH-PTPERPLPVGQDMFS 299
+ LC + T ER L + + + S
Sbjct: 3413 MALCADRTETLERALALMEQLTS 3435
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 27.9 bits (59), Expect = 3.6
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 60 KCALQKPRDINSWSRKSEIKFNELAAEGATIFNVQFIAAGDIS--IVELYLEGKSVTEEL 233
K L+ R N + ++++F +A E + + + + I + EGK + EE+
Sbjct: 2808 KSQLKHQRITNEEASANKVQFRNVAGEAKKVARQLGMEGNEANEKISDTVDEGKELVEEV 2867
Query: 234 VGLCEEH-PTPERPLPVGQDMFS 299
+ LC + T ER L + + + S
Sbjct: 2868 MALCADRTETLERALALMEQLTS 2890
>U39999-9|AAY44013.1| 122|Caenorhabditis elegans Hypothetical
protein F41G3.21 protein.
Length = 122
Score = 27.9 bits (59), Expect = 3.6
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -1
Query: 427 SSTIHSNSSATLSFS--ITLSKSETQFSNCT*NSSRVFTKQTFPLLNISCPTGRGLSGVG 254
SST S SS T S S + L+ T S+CT +S PL+ CP G G
Sbjct: 63 SSTATSVSSTTSSSSTCVDLTNPRTGTSDCTRLASYCTNSVYIPLMRTQCPRTCGFCTSG 122
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 27.9 bits (59), Expect = 3.6
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 60 KCALQKPRDINSWSRKSEIKFNELAAEGATIFNVQFIAAGDIS--IVELYLEGKSVTEEL 233
K L+ R N + ++++F +A E + + + + I + EGK + EE+
Sbjct: 3353 KSQLKHQRITNEEASANKVQFRNVAGEAKKVARQLGMEGNEANEKISDTVDEGKELVEEV 3412
Query: 234 VGLCEEH-PTPERPLPVGQDMFS 299
+ LC + T ER L + + + S
Sbjct: 3413 MALCADRTETLERALALMEQLTS 3435
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 27.9 bits (59), Expect = 3.6
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 60 KCALQKPRDINSWSRKSEIKFNELAAEGATIFNVQFIAAGDIS--IVELYLEGKSVTEEL 233
K L+ R N + ++++F +A E + + + + I + EGK + EE+
Sbjct: 3353 KSQLKHQRITNEEASANKVQFRNVAGEAKKVARQLGMEGNEANEKISDTVDEGKELVEEV 3412
Query: 234 VGLCEEH-PTPERPLPVGQDMFS 299
+ LC + T ER L + + + S
Sbjct: 3413 MALCADRTETLERALALMEQLTS 3435
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 27.9 bits (59), Expect = 3.6
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 60 KCALQKPRDINSWSRKSEIKFNELAAEGATIFNVQFIAAGDIS--IVELYLEGKSVTEEL 233
K L+ R N + ++++F +A E + + + + I + EGK + EE+
Sbjct: 2808 KSQLKHQRITNEEASANKVQFRNVAGEAKKVARQLGMEGNEANEKISDTVDEGKELVEEV 2867
Query: 234 VGLCEEH-PTPERPLPVGQDMFS 299
+ LC + T ER L + + + S
Sbjct: 2868 MALCADRTETLERALALMEQLTS 2890
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 27.9 bits (59), Expect = 3.6
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 60 KCALQKPRDINSWSRKSEIKFNELAAEGATIFNVQFIAAGDIS--IVELYLEGKSVTEEL 233
K L+ R N + ++++F +A E + + + + I + EGK + EE+
Sbjct: 3353 KSQLKHQRITNEEASANKVQFRNVAGEAKKVARQLGMEGNEANEKISDTVDEGKELVEEV 3412
Query: 234 VGLCEEH-PTPERPLPVGQDMFS 299
+ LC + T ER L + + + S
Sbjct: 3413 MALCADRTETLERALALMEQLTS 3435
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 27.9 bits (59), Expect = 3.6
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 60 KCALQKPRDINSWSRKSEIKFNELAAEGATIFNVQFIAAGDIS--IVELYLEGKSVTEEL 233
K L+ R N + ++++F +A E + + + + I + EGK + EE+
Sbjct: 3353 KSQLKHQRITNEEASANKVQFRNVAGEAKKVARQLGMEGNEANEKISDTVDEGKELVEEV 3412
Query: 234 VGLCEEH-PTPERPLPVGQDMFS 299
+ LC + T ER L + + + S
Sbjct: 3413 MALCADRTETLERALALMEQLTS 3435
>Z81048-3|CAB02841.1| 407|Caenorhabditis elegans Hypothetical
protein C41G7.4 protein.
Length = 407
Score = 27.5 bits (58), Expect = 4.7
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -1
Query: 448 AQIDPTVSSTIHSNSSATLSFSITLSKSETQFSNCT*NSSRVFTKQTFPL 299
A DP + S +S + FS S++ NCT NS + K+ FPL
Sbjct: 152 ASFDPVMFSNSNSTFDRCIGFSC--SEACGCKGNCTNNSLLILNKKLFPL 199
>Z29117-12|CAE17731.1| 179|Caenorhabditis elegans Hypothetical
protein C48B4.13 protein.
Length = 179
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 6 DDCVVYRDELKIKPALSRKCALQKPRDINSWSRKSEIK 119
DD YR L KP L R C L + +W R + +
Sbjct: 20 DDLAPYRWNLVPKPLLKRLCNLDDSLPVCAWKRHNHAR 57
>Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 27.1 bits (57), Expect = 6.2
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = -1
Query: 208 SRYNSTMDISPAAINCTLKIVAPSAANSLNFISDLRDHEFMSRGFCRAHFLER 50
+R+N T+ +S A+N +L+ V S+A +L + H+ S C+ H + R
Sbjct: 520 TRHNETIRMSSPAVNVSLESVTRSSA-TLRIVFSTH-HDSTSISNCQMHIVVR 570
>Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 27.1 bits (57), Expect = 6.2
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = -1
Query: 208 SRYNSTMDISPAAINCTLKIVAPSAANSLNFISDLRDHEFMSRGFCRAHFLER 50
+R+N T+ +S A+N +L+ V S+A +L + H+ S C+ H + R
Sbjct: 520 TRHNETIRMSSPAVNVSLESVTRSSA-TLRIVFSTH-HDSTSISNCQMHIVVR 570
>U42831-1|AAA83513.2| 614|Caenorhabditis elegans Hypothetical
protein R11B5.1 protein.
Length = 614
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -1
Query: 274 RGLSGVGCSSHRPTSSSVTDLPSRYNS---TMDISPAAINCTLKIVAPSAANSLNF 116
R L+G CS ++ V +LP YN+ ++D +P ++ C +PS A F
Sbjct: 16 RKLAGRSCSQSSSLATVVENLPLSYNTDTKSLDRTP-SLGCQGGAESPSTAQETKF 70
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 27.1 bits (57), Expect = 6.2
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Frame = -1
Query: 427 SSTIHSNSSATL-----SFSITLSKSETQFSNCT*NSSRVFTKQTFPLLNISCPTGRGLS 263
SST + S AT + ++S T + S V T ++ P+G +
Sbjct: 474 SSTAGATSPATQQSTKPTIGTSMSSGPTTVAPGASTESTVLQSSTPSGTTVTLPSGSSTA 533
Query: 262 GVGCSSHRPTSSSVTDLPSRYNSTMDISPAAINCTLKIVAPSAANS 125
G S T ++VTD+ + ST ++ +L +P++A S
Sbjct: 534 TAGTSPQASTVTTVTDISTVSGST--VTSQTAESSLSTESPTSAGS 577
>AC084159-14|AAK39369.2| 480|Caenorhabditis elegans Hypothetical
protein Y73B3A.6 protein.
Length = 480
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 252 HPTPERPLPVGQDMFSNGKVCFVNTLEEFYVQLENCVS 365
H P RP+PV ++ + + T ++ V L NCV+
Sbjct: 271 HFPPSRPIPVCSNLEVHAGKSHIMTKDDMRVWLRNCVA 308
>AC024138-1|AAU05565.1| 319|Caenorhabditis elegans Hypothetical
protein H08J11.2 protein.
Length = 319
Score = 27.1 bits (57), Expect = 6.2
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 253 CSSHRPTSSSVTDLPSRYNSTMDISP 176
CS PT+S + LPS S M + P
Sbjct: 17 CSDDEPTTSGLIPLPSLIQSNMSVLP 42
>Z78239-2|CAI79140.1| 189|Caenorhabditis elegans Hypothetical
protein C30G7.2 protein.
Length = 189
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -1
Query: 316 KQTFPLLNISCPTGRGLSGVGCSSHRPTSSSVTDLPSRYNSTMDIS 179
KQ L +S G+SG+GC +NSTMD+S
Sbjct: 24 KQFAVFLVLSLAVMEGVSGIGCFVCSSFDGENKGCEDPFNSTMDLS 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,631,256
Number of Sequences: 27780
Number of extensions: 221773
Number of successful extensions: 742
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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