Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_E08
         (456 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J02645-1|AAA52373.1|  315|Homo sapiens EIF2 protein.                  170   2e-42
BC002513-1|AAH02513.1|  315|Homo sapiens EIF2S1 protein protein.      170   2e-42

>J02645-1|AAA52373.1|  315|Homo sapiens EIF2 protein.
          Length = 315

 Score =  170 bits (413), Expect = 2e-42
 Identities = 85/121 (70%), Positives = 94/121 (77%), Gaps = 1/121 (0%)
 Frame = +3

Query: 87  MP-LSCRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLEYNNIEGMXXXXXXXXXXXXXXN 263
           MP LSCRFYQ K+PEVEDVVMVNVRSIAEMGAYV LLEYNNIEGM              N
Sbjct: 1   MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSIN 60

Query: 264 KLIRVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIDKCTERYAKAKAVNSILRHVAELLH 443
           KLIR+G+ E VVVIRVDKEKGYIDLSKRRVS E+  KC +++ K+K V SILRHVAE+L 
Sbjct: 61  KLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLE 120

Query: 444 Y 446
           Y
Sbjct: 121 Y 121


>BC002513-1|AAH02513.1|  315|Homo sapiens EIF2S1 protein protein.
          Length = 315

 Score =  170 bits (413), Expect = 2e-42
 Identities = 85/121 (70%), Positives = 94/121 (77%), Gaps = 1/121 (0%)
 Frame = +3

Query: 87  MP-LSCRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLEYNNIEGMXXXXXXXXXXXXXXN 263
           MP LSCRFYQ K+PEVEDVVMVNVRSIAEMGAYV LLEYNNIEGM              N
Sbjct: 1   MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSIN 60

Query: 264 KLIRVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIDKCTERYAKAKAVNSILRHVAELLH 443
           KLIR+G+ E VVVIRVDKEKGYIDLSKRRVS E+  KC +++ K+K V SILRHVAE+L 
Sbjct: 61  KLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLE 120

Query: 444 Y 446
           Y
Sbjct: 121 Y 121


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,876,744
Number of Sequences: 237096
Number of extensions: 1040008
Number of successful extensions: 9423
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9423
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)