Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_E05
(418 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12017-9|CAA78053.1| 537|Caenorhabditis elegans Hypothetical pr... 56 1e-08
Z11505-11|CAA77591.1| 537|Caenorhabditis elegans Hypothetical p... 56 1e-08
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 30 0.78
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 30 0.78
U61955-4|AAC24407.1| 772|Caenorhabditis elegans Zygotic epiderm... 27 4.1
U61955-3|AAC24406.1| 775|Caenorhabditis elegans Zygotic epiderm... 27 4.1
U61955-2|AAM97993.1| 777|Caenorhabditis elegans Zygotic epiderm... 27 4.1
AF057568-1|AAC33438.1| 772|Caenorhabditis elegans kinesin-like ... 27 4.1
AF057567-1|AAC33437.1| 775|Caenorhabditis elegans kinesin-like ... 27 4.1
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 27 7.2
U88167-8|ABE73339.1| 140|Caenorhabditis elegans Hypothetical pr... 26 9.5
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 26 9.5
>Z12017-9|CAA78053.1| 537|Caenorhabditis elegans Hypothetical
protein R08D7.7 protein.
Length = 537
Score = 55.6 bits (128), Expect = 1e-08
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +3
Query: 21 ARALLEGQALARRAHAEDMAFKIDGSSRLIATGGASVNNELLQIFSDVFNAPVYVLKQHG 200
ARA+ E Q L + + + M FK SR++ TGGAS N LLQI SDVF PV + G
Sbjct: 402 ARAVFESQCLFKLLYTQKMGFKKSDCSRILVTGGASRNTVLLQILSDVFEMPVCTIDVDG 461
Query: 201 N 203
+
Sbjct: 462 S 462
>Z11505-11|CAA77591.1| 537|Caenorhabditis elegans Hypothetical
protein R08D7.7 protein.
Length = 537
Score = 55.6 bits (128), Expect = 1e-08
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +3
Query: 21 ARALLEGQALARRAHAEDMAFKIDGSSRLIATGGASVNNELLQIFSDVFNAPVYVLKQHG 200
ARA+ E Q L + + + M FK SR++ TGGAS N LLQI SDVF PV + G
Sbjct: 402 ARAVFESQCLFKLLYTQKMGFKKSDCSRILVTGGASRNTVLLQILSDVFEMPVCTIDVDG 461
Query: 201 N 203
+
Sbjct: 462 S 462
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of
glp-1 protein.
Length = 1492
Score = 29.9 bits (64), Expect = 0.78
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 151 YSPTFSTHPYTYSSSTVTQPYWAPPFAPQTSGAPAQA 261
Y S P + S + P+ APP AP GAP QA
Sbjct: 854 YQGPHSPVPGALTGSQASGPFGAPPGAPHGYGAPLQA 890
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 29.9 bits (64), Expect = 0.78
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 151 YSPTFSTHPYTYSSSTVTQPYWAPPFAPQTSGAPAQA 261
Y S P + S + P+ APP AP GAP QA
Sbjct: 874 YQGPHSPVPGALTGSQASGPFGAPPGAPHGYGAPLQA 910
>U61955-4|AAC24407.1| 772|Caenorhabditis elegans Zygotic epidermal
enclosure defectiveprotein 4, isoform b protein.
Length = 772
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -1
Query: 196 CCLSTYTGALKTSENICNSSLLTLAPPVAIRREE-PSILK 80
C L YTG+ + I S+ T+ PP RRE P + K
Sbjct: 32 CRLCPYTGSTPSLIAIDEGSIQTVLPPAQFRRENAPQVEK 71
>U61955-3|AAC24406.1| 775|Caenorhabditis elegans Zygotic epidermal
enclosure defectiveprotein 4, isoform a protein.
Length = 775
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -1
Query: 196 CCLSTYTGALKTSENICNSSLLTLAPPVAIRREE-PSILK 80
C L YTG+ + I S+ T+ PP RRE P + K
Sbjct: 32 CRLCPYTGSTPSLIAIDEGSIQTVLPPAQFRRENAPQVEK 71
>U61955-2|AAM97993.1| 777|Caenorhabditis elegans Zygotic epidermal
enclosure defectiveprotein 4, isoform c protein.
Length = 777
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -1
Query: 196 CCLSTYTGALKTSENICNSSLLTLAPPVAIRREE-PSILK 80
C L YTG+ + I S+ T+ PP RRE P + K
Sbjct: 32 CRLCPYTGSTPSLIAIDEGSIQTVLPPAQFRRENAPQVEK 71
>AF057568-1|AAC33438.1| 772|Caenorhabditis elegans kinesin-like
protein ZEN-4b protein.
Length = 772
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -1
Query: 196 CCLSTYTGALKTSENICNSSLLTLAPPVAIRREE-PSILK 80
C L YTG+ + I S+ T+ PP RRE P + K
Sbjct: 32 CRLCPYTGSTPSLIAIDEGSIQTVLPPAQFRRENAPQVEK 71
>AF057567-1|AAC33437.1| 775|Caenorhabditis elegans kinesin-like
protein ZEN-4a protein.
Length = 775
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -1
Query: 196 CCLSTYTGALKTSENICNSSLLTLAPPVAIRREE-PSILK 80
C L YTG+ + I S+ T+ PP RRE P + K
Sbjct: 32 CRLCPYTGSTPSLIAIDEGSIQTVLPPAQFRRENAPQVEK 71
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 157 PTFSTHPYTYSSSTVTQPYWAPPFAPQTSGAPAQAS 264
PT ++ Y SST + AP P T+GAP ++
Sbjct: 227 PTTTSTAYAAPSSTASTSTPAPTNLPTTTGAPTNST 262
>U88167-8|ABE73339.1| 140|Caenorhabditis elegans Hypothetical
protein D2092.10 protein.
Length = 140
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 163 FSTHPYTYSSSTVTQPYWAPPFAPQTSGAPAQAS 264
F H YS S + + ++ PP P G P AS
Sbjct: 85 FYIHTVKYSHSLIPRGFFVPPALPYHFGLPDLAS 118
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +1
Query: 151 YSPTFSTHPYTYSSSTVTQPYWAPPFAPQTSG--APAQASNY 270
Y+P ++ + Y S P +A +AP + APA A +Y
Sbjct: 236 YAPAYNPYSYVLRSPVAAAPGYAQGYAPAYAQGYAPAYAPSY 277
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,374,105
Number of Sequences: 27780
Number of extensions: 147600
Number of successful extensions: 601
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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