Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_E05
         (418 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           25   0.45 
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   1.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   3.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   3.2  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   3.2  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   4.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   4.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.4  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    20   9.7  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 24.6 bits (51), Expect = 0.45
 Identities = 11/39 (28%), Positives = 15/39 (38%)
 Frame = +3

Query: 237 DVWSSSTGIKLPASEPSVTPVATPYPDHDNIYTPMLARY 353
           +VW     I LP  +  +    T  P H    +P L  Y
Sbjct: 193 EVWRDKVFITLPKWKDGIPVTLTTVPKHSKTKSPKLRPY 231


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 157 PTFSTHPYTYSSSTVTQPYWAP 222
           PT+ TH  TYS   +   YW P
Sbjct: 196 PTY-THEITYSLFGMIMMYWFP 216


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 324 NIYTPMLARYRKIIENIPK 380
           +IY  +L  Y K  EN+PK
Sbjct: 419 SIYKTILDYYHKYKENLPK 437


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 324 NIYTPMLARYRKIIENIPK 380
           +IY  +L  Y K  EN+PK
Sbjct: 419 SIYKTILDYYHKYKENLPK 437


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 324 NIYTPMLARYRKIIENIPK 380
           +IY  +L  Y K  EN+PK
Sbjct: 45  SIYKTILDYYHKYKENLPK 63


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 190 LSTYTGALKTSENICNSSLLTLAPPVAIRREEPSI 86
           ++ YTG   TSE++   S LT A   ++   E S+
Sbjct: 793 ITKYTGCELTSESMPLQSALTAAVQTSVGVTEISL 827


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 190 LSTYTGALKTSENICNSSLLTLAPPVAIRREEPSI 86
           ++ YTG   TSE++   S LT A   ++   E S+
Sbjct: 883 ITKYTGCELTSESMPLQSALTAAVQTSVGVTEISL 917


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 49   SLGGHTPRTWPSRSTV 96
            S GGH  R W   +T+
Sbjct: 1318 SFGGHVVRPWRGSATL 1333


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 49   SLGGHTPRTWPSRSTV 96
            S GGH  R W   +T+
Sbjct: 1314 SFGGHVVRPWRGSATL 1329


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +3

Query: 120 GASVNNELLQIFSDVFNAPVYVLKQHGN 203
           GAS N+E  +++ D+ +    +++  GN
Sbjct: 14  GASANSEAKRLYDDLLSNYNRLIRPVGN 41


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,356
Number of Sequences: 438
Number of extensions: 1680
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)