Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_E04
(562 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62424 Cluster: 60S ribosomal protein L7a; n=226; Eukar... 159 3e-38
UniRef50_UPI0000E1EF65 Cluster: PREDICTED: similar to 60S riboso... 153 3e-36
UniRef50_Q966C6-2 Cluster: Isoform c of Q966C6 ; n=4; Bilateria|... 136 2e-31
UniRef50_Q3SAE2 Cluster: Ribosomal protein L7A; n=2; Bigelowiell... 130 2e-29
UniRef50_UPI0001552F1A Cluster: PREDICTED: similar to Ribosomal ... 129 5e-29
UniRef50_Q5DG58 Cluster: SJCHGC02816 protein; n=1; Schistosoma j... 129 5e-29
UniRef50_A7APX8 Cluster: Ribosomal protein L7Ae family protein; ... 121 1e-26
UniRef50_Q54ZD1 Cluster: 60S ribosomal protein L7a; n=2; Dictyos... 121 1e-26
UniRef50_UPI00006D0064 Cluster: Ribosomal protein L7Ae containin... 120 2e-26
UniRef50_Q4VH13 Cluster: Rpl7A; n=2; Euglena gracilis|Rep: Rpl7A... 118 7e-26
UniRef50_Q3T2L9 Cluster: Rpl7A; n=2; Jakoba libera|Rep: Rpl7A - ... 116 3e-25
UniRef50_Q75CI9 Cluster: ACL070Cp; n=31; Eukaryota|Rep: ACL070Cp... 114 2e-24
UniRef50_A0CSP0 Cluster: Chromosome undetermined scaffold_26, wh... 113 2e-24
UniRef50_Q6CQ17 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 113 3e-24
UniRef50_P29453 Cluster: 60S ribosomal protein L8-B; n=55; Eukar... 113 4e-24
UniRef50_Q4QIP1 Cluster: 60S ribosomal protein L7a, putative; n=... 110 2e-23
UniRef50_Q9NBK2 Cluster: Ribosomal protein L7a; n=3; Caenorhabdi... 109 3e-23
UniRef50_Q7RAN9 Cluster: 60S ribosomal protein L7a; n=7; Plasmod... 103 3e-21
UniRef50_UPI00005A55A3 Cluster: PREDICTED: similar to 60S riboso... 88 2e-20
UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria g... 98 1e-19
UniRef50_UPI0001553583 Cluster: PREDICTED: similar to ribosomal ... 96 4e-19
UniRef50_A2E3E3 Cluster: 60S ribosomal protein L7a, putative; n=... 89 7e-17
UniRef50_A7U817 Cluster: Ribosomal protein L7A; n=9; Giardia int... 88 1e-16
UniRef50_UPI0000499ADF Cluster: 60S ribosomal protein L7a; n=3; ... 83 3e-15
UniRef50_Q3SAD9 Cluster: Ribosomal protein L7A; n=2; Spironucleu... 81 1e-14
UniRef50_Q7TQ86 Cluster: Ac1158; n=8; Eumetazoa|Rep: Ac1158 - Ra... 76 7e-13
UniRef50_UPI000156049B Cluster: PREDICTED: hypothetical protein;... 67 3e-10
UniRef50_UPI000056487F Cluster: UPI000056487F related cluster; n... 61 2e-08
UniRef50_UPI0000DC13DB Cluster: UPI0000DC13DB related cluster; n... 58 2e-07
UniRef50_Q98RU4 Cluster: 60s ribosomal protein L7A; n=1; Guillar... 54 2e-06
UniRef50_Q07880 Cluster: Putative uncharacterized protein YLL044... 48 2e-04
UniRef50_UPI0000DA34B6 Cluster: PREDICTED: similar to 60S riboso... 44 0.002
UniRef50_Q8SSG1 Cluster: 60S RIBOSOMAL PROTEIN L7A /yeast L8; n=... 42 0.013
UniRef50_Q1GKA5 Cluster: Transcriptional regulator TetR family; ... 41 0.017
UniRef50_UPI0000DC0A94 Cluster: UPI0000DC0A94 related cluster; n... 39 0.069
UniRef50_UPI0000DA4476 Cluster: PREDICTED: similar to 60S riboso... 33 6.0
UniRef50_Q6N1R6 Cluster: Transcriptional regulator, TetR family;... 32 8.0
>UniRef50_P62424 Cluster: 60S ribosomal protein L7a; n=226;
Eukaryota|Rep: 60S ribosomal protein L7a - Homo sapiens
(Human)
Length = 266
Score = 159 bits (387), Expect = 3e-38
Identities = 78/127 (61%), Positives = 88/127 (69%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 539
TA L K+ KYRPET + P KRP LRAG NTVT LVE K
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENK 150
Query: 540 KAQLVVI 560
KAQLVVI
Sbjct: 151 KAQLVVI 157
>UniRef50_UPI0000E1EF65 Cluster: PREDICTED: similar to 60S ribosomal
protein L7a (Surfeit locus protein 3) isoform 3; n=3;
Euarchontoglires|Rep: PREDICTED: similar to 60S
ribosomal protein L7a (Surfeit locus protein 3) isoform
3 - Pan troglodytes
Length = 243
Score = 153 bits (371), Expect = 3e-36
Identities = 76/127 (59%), Positives = 86/127 (67%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
LFEKR KNF IGQDIQP RDL+ FV+WP YIR+QRQ+A+L +RLKVPP INQFTQ LD+
Sbjct: 28 LFEKRPKNFGIGQDIQPKRDLTCFVKWPCYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 87
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 539
TA L K+ KYRPET + P KRP LRAG NT+T LVE K
Sbjct: 88 TATQLLKLAHKYRPETKQEKKQRPLAQAEKRAAGKGDVPIKRPPVLRAGVNTITTLVENK 147
Query: 540 KAQLVVI 560
KAQLVVI
Sbjct: 148 KAQLVVI 154
>UniRef50_Q966C6-2 Cluster: Isoform c of Q966C6 ; n=4;
Bilateria|Rep: Isoform c of Q966C6 - Caenorhabditis
elegans
Length = 245
Score = 136 bits (330), Expect = 2e-31
Identities = 69/127 (54%), Positives = 88/127 (69%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
LFEKR +NF IGQDIQP +D++RFV+WPKYIR+QRQ A+LQ+RLKVPP INQF LD
Sbjct: 32 LFEKRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQSAILQKRLKVPPTINQFRTALDSQ 91
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 539
+A+ FK+L+KYRPE+ KRPNT+R G NT+T+LVE +
Sbjct: 92 SARQAFKLLDKYRPESTEV--------------------TKRPNTVRHGVNTITRLVETR 131
Query: 540 KAQLVVI 560
+AQLV+I
Sbjct: 132 RAQLVLI 138
>UniRef50_Q3SAE2 Cluster: Ribosomal protein L7A; n=2; Bigelowiella
natans|Rep: Ribosomal protein L7A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 248
Score = 130 bits (315), Expect = 2e-29
Identities = 62/127 (48%), Positives = 82/127 (64%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
LF+K K+F IG+ +QP ++LSRFV+WP+YIRIQRQKA+L++RL+VPP +NQFT T+DK
Sbjct: 29 LFKKTPKDFRIGRSVQPKQNLSRFVKWPRYIRIQRQKAILKQRLRVPPAVNQFTNTIDKN 88
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 539
A LFK+L KYRPE +P L+ G N +T LVE +
Sbjct: 89 QAMTLFKLLAKYRPENRKEKQERLKAIAEEKVKNAKSGNKDKPKVLKYGLNHITSLVESR 148
Query: 540 KAQLVVI 560
KA+LVVI
Sbjct: 149 KAKLVVI 155
>UniRef50_UPI0001552F1A Cluster: PREDICTED: similar to Ribosomal
protein L7a; n=4; Eutheria|Rep: PREDICTED: similar to
Ribosomal protein L7a - Mus musculus
Length = 246
Score = 129 bits (311), Expect = 5e-29
Identities = 70/127 (55%), Positives = 83/127 (65%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
LFEKR K+F GQDIQP RDL FV+WP+YIR+QRQ+A+L + LKVPP IN FTQ LD+
Sbjct: 31 LFEKRPKHFGTGQDIQPKRDLMCFVKWPRYIRLQRQRAILYKWLKVPPAINPFTQALDRQ 90
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 539
TA L K++ KYRPET + KRP L+AG NTVT L+E K
Sbjct: 91 TATQLLKLVHKYRPET--------------------KQATKRPPVLQAGVNTVTTLMENK 130
Query: 540 KAQLVVI 560
KAQLVVI
Sbjct: 131 KAQLVVI 137
>UniRef50_Q5DG58 Cluster: SJCHGC02816 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02816 protein - Schistosoma
japonicum (Blood fluke)
Length = 252
Score = 129 bits (311), Expect = 5e-29
Identities = 61/128 (47%), Positives = 87/128 (67%), Gaps = 1/128 (0%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
L ++R KNF IGQ+IQP R+L RFV+WPKYI +QR+KA+L++RLK+PPPI+QF+QTLD+
Sbjct: 56 LIQRRPKNFGIGQNIQPKRNLYRFVKWPKYIELQRKKAILKKRLKIPPPIHQFSQTLDRN 115
Query: 360 TAKGLFKILEKYRP-ETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEK 536
+A +F ++ KY+P D+P P++P T+RAG VT + +
Sbjct: 116 SANQIFNLVTKYQPLSKQAKKMLLVHRAQLRAEGKPDQPTPRKP-TVRAGIREVTTAITQ 174
Query: 537 KKAQLVVI 560
KKA+LVVI
Sbjct: 175 KKARLVVI 182
>UniRef50_A7APX8 Cluster: Ribosomal protein L7Ae family protein;
n=1; Babesia bovis|Rep: Ribosomal protein L7Ae family
protein - Babesia bovis
Length = 269
Score = 121 bits (292), Expect = 1e-26
Identities = 63/127 (49%), Positives = 80/127 (62%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
LF KN+ IG DI+P +LSR+V+WPKY+RIQRQ+ VL +RLK+PP INQF T+DK+
Sbjct: 32 LFVHPPKNYGIGGDIRPRVNLSRYVKWPKYVRIQRQRRVLLQRLKIPPAINQFNYTIDKS 91
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 539
A L K+L KY+PET E K+P L++G N VT LVE K
Sbjct: 92 QAHQLLKLLSKYKPET-RKEKSARLLADANAIAQGQEVVSKKPYMLKSGLNHVTNLVEYK 150
Query: 540 KAQLVVI 560
KA+LVVI
Sbjct: 151 KAKLVVI 157
>UniRef50_Q54ZD1 Cluster: 60S ribosomal protein L7a; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L7a
- Dictyostelium discoideum AX4
Length = 285
Score = 121 bits (291), Expect = 1e-26
Identities = 63/131 (48%), Positives = 80/131 (61%), Gaps = 4/131 (3%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
L+ K KNF G +QP RDL+ F WP+YI++QRQ+ VL +RLKVPP INQFT+ DK
Sbjct: 46 LYTKNVKNFGTGFGVQPKRDLTHFTHWPRYIKLQRQRRVLLKRLKVPPTINQFTRVFDKN 105
Query: 360 TAKGLFKILEKYRPE---TXXXXXXXXXXXXXXXXXXXDEPPPKRP-NTLRAGTNTVTKL 527
TA LFK+L+KYRPE P ++P LR G ++VTKL
Sbjct: 106 TAVHLFKLLDKYRPEEASVKKARLLKIAEARAATPKGQAAPKAEKPVQHLRFGIDSVTKL 165
Query: 528 VEKKKAQLVVI 560
+EKKKA+LVVI
Sbjct: 166 IEKKKAKLVVI 176
>UniRef50_UPI00006D0064 Cluster: Ribosomal protein L7Ae containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L7Ae containing protein - Tetrahymena
thermophila SB210
Length = 286
Score = 120 bits (290), Expect = 2e-26
Identities = 60/127 (47%), Positives = 80/127 (62%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
LF+ + ++F +G DIQP RDL+RFVRWP+YI +QRQK VL +RLKVPP I+QFT+TLDK
Sbjct: 120 LFQAKPRSFRVGGDIQPKRDLTRFVRWPRYITLQRQKRVLLQRLKVPPQIHQFTKTLDKN 179
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 539
+ LFK+L Y PE + K+P L+ G N +T L+E K
Sbjct: 180 QSSNLFKLLASYAPE-KPAEKKQRLVAQAEAKKDGKQVETKKPIVLKYGLNHITTLIENK 238
Query: 540 KAQLVVI 560
+A+LVVI
Sbjct: 239 QAKLVVI 245
>UniRef50_Q4VH13 Cluster: Rpl7A; n=2; Euglena gracilis|Rep: Rpl7A -
Euglena gracilis
Length = 295
Score = 118 bits (285), Expect = 7e-26
Identities = 59/127 (46%), Positives = 77/127 (60%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
LFE R KNF++GQD+QP RDLSRFVRWP YI+ QRQK +L +RL+VPP INQF T+D+
Sbjct: 63 LFESRPKNFSVGQDLQPKRDLSRFVRWPAYIKRQRQKRILLKRLRVPPAINQFNHTVDRH 122
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 539
K LFK KY+PE+ P + +G V +LVE+K
Sbjct: 123 LKKELFKFALKYKPESSFERRSRLKKEAEAKLKDPKAPASVPGPRVYSGAQRVFRLVEQK 182
Query: 540 KAQLVVI 560
+A+LV+I
Sbjct: 183 RAKLVLI 189
>UniRef50_Q3T2L9 Cluster: Rpl7A; n=2; Jakoba libera|Rep: Rpl7A -
Jakoba libera
Length = 250
Score = 116 bits (280), Expect = 3e-25
Identities = 60/123 (48%), Positives = 76/123 (61%)
Frame = +3
Query: 192 RTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKG 371
R KNF +G +QP RD++RFV+WPKYIR+QRQ+++L RRLKVPP I QF TLDK A
Sbjct: 58 RPKNFGLGGTVQPKRDVTRFVKWPKYIRLQRQRSILLRRLKVPPSIRQFRFTLDKNVATQ 117
Query: 372 LFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKKKAQL 551
L +L KY PET + K+P L+ G N +T LVE+KKA+L
Sbjct: 118 LITLLSKYSPET----KAEKSARLLAAAQEGEGSSKKKPFVLKFGLNHITTLVEQKKAKL 173
Query: 552 VVI 560
VVI
Sbjct: 174 VVI 176
>UniRef50_Q75CI9 Cluster: ACL070Cp; n=31; Eukaryota|Rep: ACL070Cp -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 305
Score = 114 bits (274), Expect = 2e-24
Identities = 60/123 (48%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Frame = +3
Query: 198 KNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLF 377
+NF IGQ IQP R+LSR+V+WP+Y+R+QRQK +L RLKVPP I QF TLD+ TA F
Sbjct: 81 RNFGIGQAIQPKRNLSRYVKWPEYVRLQRQKKILSMRLKVPPTIAQFQHTLDRNTAAETF 140
Query: 378 KILEKYRPETXXXXXXXXXXXXXXXXXXXD--EPPPKRPNTLRAGTNTVTKLVEKKKAQL 551
K+ KYRPET E PK P ++ G N V LVE KKA+L
Sbjct: 141 KLFNKYRPETAAEKKDRLATEAAAIAEGKTRMEASPK-PYAVKFGLNHVVSLVENKKAKL 199
Query: 552 VVI 560
V+I
Sbjct: 200 VLI 202
>UniRef50_A0CSP0 Cluster: Chromosome undetermined scaffold_26, whole
genome shotgun sequence; n=13; Alveolata|Rep: Chromosome
undetermined scaffold_26, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 340
Score = 113 bits (273), Expect = 2e-24
Identities = 59/127 (46%), Positives = 77/127 (60%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
LF K KNF IG D+QP RDLSR+VRWP+YI + RQK +L +R+KVP I+QF++TLDK
Sbjct: 106 LFVKDAKNFRIGNDVQPKRDLSRYVRWPRYILLHRQKKILLQRIKVPAAIHQFSRTLDKN 165
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 539
+ + +L+KY PET + K+ L+ G N VT LVE K
Sbjct: 166 QSSKVLGLLKKYSPET-KTEKKQRLTKLAEQKAQAQKTDSKKVQVLKFGLNHVTTLVETK 224
Query: 540 KAQLVVI 560
KA+LVVI
Sbjct: 225 KAKLVVI 231
>UniRef50_Q6CQ17 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome E of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Eukaryota|Rep: Kluyveromyces lactis strain
NRRL Y-1140 chromosome E of strain NRRL Y- 1140 of
Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 327
Score = 113 bits (272), Expect = 3e-24
Identities = 60/129 (46%), Positives = 77/129 (59%), Gaps = 2/129 (1%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
L + +NF IGQ IQP R+LSR+V+WP+Y+R+QRQK +L RLKVPP I QF TLD+
Sbjct: 97 LTKSSPRNFGIGQAIQPKRNLSRYVKWPEYVRLQRQKKILSIRLKVPPSIAQFQNTLDRN 156
Query: 360 TAKGLFKILEKYRPET--XXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVE 533
TA FK+L+KY PET E PK P ++ G N V L+E
Sbjct: 157 TAAETFKLLKKYSPETAAEKKERLTKEAAAIAEGKTKQEASPK-PYVVKYGLNHVVSLIE 215
Query: 534 KKKAQLVVI 560
KKA+LV+I
Sbjct: 216 NKKAKLVLI 224
>UniRef50_P29453 Cluster: 60S ribosomal protein L8-B; n=55;
Eukaryota|Rep: 60S ribosomal protein L8-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 256
Score = 113 bits (271), Expect = 4e-24
Identities = 56/122 (45%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Frame = +3
Query: 198 KNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLF 377
KNF IGQ +QP R+LSR+V+WP+Y+R+QRQK +L RLKVPP I QF TLD+ TA F
Sbjct: 32 KNFGIGQAVQPKRNLSRYVKWPEYVRLQRQKKILSIRLKVPPTIAQFQYTLDRNTAAETF 91
Query: 378 KILEKYRPETXXXXXXXXXXXXXXXXXXXD-EPPPKRPNTLRAGTNTVTKLVEKKKAQLV 554
K+ KYRPET + +P ++ G N V L+E KKA+LV
Sbjct: 92 KLFNKYRPETAAEKKERLTKEAAAIAEGKSKQDASPKPYAVKYGLNHVVSLIENKKAKLV 151
Query: 555 VI 560
+I
Sbjct: 152 LI 153
>UniRef50_Q4QIP1 Cluster: 60S ribosomal protein L7a, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L7a,
putative - Leishmania major
Length = 264
Score = 110 bits (265), Expect = 2e-23
Identities = 55/127 (43%), Positives = 75/127 (59%), Gaps = 1/127 (0%)
Frame = +3
Query: 183 FEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTT 362
F R KNF IGQD+ RDLSRF+RWP ++ +QR+K VLQRRLKVPP +NQFT+ LD+ +
Sbjct: 28 FAARPKNFGIGQDVPYARDLSRFMRWPTFVTMQRKKRVLQRRLKVPPALNQFTKVLDRAS 87
Query: 363 AKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEP-PPKRPNTLRAGTNTVTKLVEKK 539
K+++KY PET + K P + G VT+ +EKK
Sbjct: 88 RNEALKLIKKYAPETRKARRERLQKVAEEKKKDPKKTVSTKAPLAVVTGLQEVTRAIEKK 147
Query: 540 KAQLVVI 560
+A++VVI
Sbjct: 148 QARMVVI 154
>UniRef50_Q9NBK2 Cluster: Ribosomal protein L7a; n=3;
Caenorhabditis|Rep: Ribosomal protein L7a -
Caenorhabditis briggsae
Length = 73
Score = 109 bits (263), Expect = 3e-23
Identities = 46/70 (65%), Positives = 59/70 (84%)
Frame = +3
Query: 198 KNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLF 377
+NF IGQDIQP RD++RFV+WPKYIR+QRQ A+LQ+RLK+PP INQF LD +A+ F
Sbjct: 1 RNFNIGQDIQPKRDVTRFVKWPKYIRLQRQSAILQKRLKIPPTINQFRTALDSQSARQAF 60
Query: 378 KILEKYRPET 407
K+L+KYRPE+
Sbjct: 61 KLLDKYRPES 70
>UniRef50_Q7RAN9 Cluster: 60S ribosomal protein L7a; n=7;
Plasmodium|Rep: 60S ribosomal protein L7a - Plasmodium
yoelii yoelii
Length = 318
Score = 103 bits (247), Expect = 3e-21
Identities = 49/127 (38%), Positives = 76/127 (59%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
+FE++ K+ IG I+P +DLS++V+WPK++R+QR+K +L +RLKVPP INQF TL K
Sbjct: 80 IFERKRKSNIIGVGIRPKKDLSKYVKWPKHLRLQRKKKILLQRLKVPPAINQFNYTLSKN 139
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 539
+ L L++Y+PE+ + K+P ++ G +TKL+E+K
Sbjct: 140 QTQDLMNFLKEYKPESKSEKKERLLKKAKDDLNNA-QSKDKKPMMIKYGIKHITKLIERK 198
Query: 540 KAQLVVI 560
LVVI
Sbjct: 199 NCSLVVI 205
>UniRef50_UPI00005A55A3 Cluster: PREDICTED: similar to 60S ribosomal
protein L7a; n=2; Eutheria|Rep: PREDICTED: similar to
60S ribosomal protein L7a - Canis familiaris
Length = 231
Score = 88.2 bits (209), Expect(2) = 2e-20
Identities = 39/63 (61%), Positives = 48/63 (76%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
L EKR K F IGQDIQP RDL+RFV+WP YI++Q Q+A+L + L+VPP INQFTQ +
Sbjct: 69 LCEKRPKYFGIGQDIQPKRDLNRFVKWPHYIQLQLQRAILYKHLEVPPTINQFTQAFNSP 128
Query: 360 TAK 368
T K
Sbjct: 129 TRK 131
Score = 33.5 bits (73), Expect(2) = 2e-20
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3
Query: 480 KRPNTLRAGTNTVTKLVEKKKAQLVVI 560
+R + L+AG NTVT LVE KKAQL +I
Sbjct: 146 ERLSVLQAGVNTVTILVETKKAQLGMI 172
>UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria
gruberi|Rep: Ribosomal protein L7A - Naegleria gruberi
Length = 258
Score = 98.3 bits (234), Expect = 1e-19
Identities = 50/127 (39%), Positives = 69/127 (54%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
L R K+ IG+D+ +L+RFV+WP Y+R+QRQK +L +R+K+PP INQF DK
Sbjct: 30 LLAPRPKDIGIGRDLGAKMNLTRFVKWPVYVRLQRQKRILLKRVKIPPAINQFRIVADKP 89
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 539
A + + L KY+PE P K ++L G N V K VE+K
Sbjct: 90 LAHSVVQFLAKYKPEDEQQKKERLRQAAKDKVEGKAATPKKSESSLIHGINEVVKAVERK 149
Query: 540 KAQLVVI 560
+A LVVI
Sbjct: 150 QASLVVI 156
>UniRef50_UPI0001553583 Cluster: PREDICTED: similar to ribosomal
protein L7a; n=2; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L7a - Mus musculus
Length = 292
Score = 96.3 bits (229), Expect = 4e-19
Identities = 58/124 (46%), Positives = 71/124 (57%)
Frame = +3
Query: 189 KRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAK 368
KR KNF+ GQDIQP DL+RFV+ P YIR+QRQ+A L ++LKVPP IN F Q LD+ TA
Sbjct: 125 KRPKNFSTGQDIQPKCDLTRFVKRPCYIRLQRQRASLYKQLKVPPAINPFPQALDRQTAT 184
Query: 369 GLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKKKAQ 548
L ++ KYRPE K+ L G + VT L+E KKAQ
Sbjct: 185 KLLQLAHKYRPEA---------------------KQEKKQRLLAPGVSIVTTLMENKKAQ 223
Query: 549 LVVI 560
L VI
Sbjct: 224 LGVI 227
>UniRef50_A2E3E3 Cluster: 60S ribosomal protein L7a, putative; n=4;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L7a,
putative - Trichomonas vaginalis G3
Length = 244
Score = 89.0 bits (211), Expect = 7e-17
Identities = 48/123 (39%), Positives = 63/123 (51%)
Frame = +3
Query: 192 RTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKG 371
R ++ +++ D + V +P+Y+RIQRQ+ +L +RLKVPPP+N F+ TLDK A
Sbjct: 21 RQEHLFAQEEVASHVDTTAEVHFPQYVRIQRQRRILMKRLKVPPPVNHFSHTLDKNIAVQ 80
Query: 372 LFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKKKAQL 551
LFK LE YRPET L G VT VE KKAQL
Sbjct: 81 LFKFLEHYRPETKAEKNQRHKEEADKTKKDLKVAATCSKKALVQGIKNVTAAVESKKAQL 140
Query: 552 VVI 560
V+I
Sbjct: 141 VII 143
>UniRef50_A7U817 Cluster: Ribosomal protein L7A; n=9; Giardia
intestinalis|Rep: Ribosomal protein L7A - Giardia
lamblia (Giardia intestinalis)
Length = 163
Score = 88.2 bits (209), Expect = 1e-16
Identities = 42/108 (38%), Positives = 58/108 (53%)
Frame = +3
Query: 237 DLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXX 416
DL+ FVRWP+ +R+QRQKAVLQRRLKVPP +NQF + + +F + KY PE+
Sbjct: 27 DLTPFVRWPRQVRVQRQKAVLQRRLKVPPTVNQFMNPISRNLTNEIFNLARKYSPESKEE 86
Query: 417 XXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKKKAQLVVI 560
P + +G +T LVE K+A+LV+I
Sbjct: 87 HKARLLQIADAKANGKPLPEKSNKLVIASGIRRITSLVENKRAKLVLI 134
>UniRef50_UPI0000499ADF Cluster: 60S ribosomal protein L7a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L7a - Entamoeba histolytica HM-1:IMSS
Length = 286
Score = 83.4 bits (197), Expect = 3e-15
Identities = 50/129 (38%), Positives = 70/129 (54%), Gaps = 8/129 (6%)
Frame = +3
Query: 198 KNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQF-TQTLDKTTAKGL 374
K F G P RDL+R+V++P Y+RIQ++K +L +RLK PP +N F TLDKT A L
Sbjct: 23 KVFGKGNVAHP-RDLTRYVKYPLYVRIQKEKRLLMKRLKTPPAVNIFANHTLDKTNATQL 81
Query: 375 FKILEKYRPETXXXXXXXXXXXXXXXXXXXDE-------PPPKRPNTLRAGTNTVTKLVE 533
FKIL+ +PE + ++P TL G N V +L+E
Sbjct: 82 FKILDHIKPEERAAKLQRIRAAAKELAEKTQKGEKATASKKTEKPATLSYGINNVVRLIE 141
Query: 534 KKKAQLVVI 560
+K+A+LVVI
Sbjct: 142 RKQAKLVVI 150
>UniRef50_Q3SAD9 Cluster: Ribosomal protein L7A; n=2; Spironucleus
barkhanus|Rep: Ribosomal protein L7A - Spironucleus
barkhanus
Length = 228
Score = 81.4 bits (192), Expect = 1e-14
Identities = 48/121 (39%), Positives = 64/121 (52%)
Frame = +3
Query: 198 KNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLF 377
K +G + +DL+R+VRWP YIRIQRQKA+LQ RLKVP INQF + K +
Sbjct: 17 KTSQMGVGVHTQKDLTRYVRWPAYIRIQRQKALLQTRLKVPGAINQFHHPVSKNLNIEIL 76
Query: 378 KILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKKKAQLVV 557
+KY ET P + + + +G N VT L+EKKKA+LV+
Sbjct: 77 NFAKKYIKETREERKVRITKMAETKTKI-----PAKASVI-SGINEVTNLIEKKKAKLVL 130
Query: 558 I 560
I
Sbjct: 131 I 131
>UniRef50_Q7TQ86 Cluster: Ac1158; n=8; Eumetazoa|Rep: Ac1158 -
Rattus norvegicus (Rat)
Length = 540
Score = 75.8 bits (178), Expect = 7e-13
Identities = 50/132 (37%), Positives = 64/132 (48%), Gaps = 7/132 (5%)
Frame = +3
Query: 183 FEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKV-------PPPINQFT 341
FEKR KNF I QDIQP RDL+RFV+W YIR+QRQ+A+L + K P P
Sbjct: 352 FEKRPKNFGIEQDIQPKRDLTRFVKWSCYIRLQRQRAILYKGSKYLLSSTSSPRPWTGRQ 411
Query: 342 QTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVT 521
+ + + + + R + KRP L+AG NTVT
Sbjct: 412 RLSCLSLPTSIGQRQSRRRSKGCWPVLRRKLLAKGTSQLRDHLSSTKRPPVLQAGVNTVT 471
Query: 522 KLVEKKKAQLVV 557
VE +KAQLVV
Sbjct: 472 TSVENQKAQLVV 483
>UniRef50_UPI000156049B Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 257
Score = 66.9 bits (156), Expect = 3e-10
Identities = 40/126 (31%), Positives = 64/126 (50%)
Frame = +2
Query: 185 REENKELCYWPGHPANQRSIPFRAMAEIYSHPASKGCVTASSQSAAANQPVHPDIR*NHS 364
REE +EL + GHPA P R MA ++ A++G ++Q A+ +QPVHP S
Sbjct: 23 REEAQELRHRTGHPAQTGPHPLRQMAPLHPAAATEGDPLXAAQGASRDQPVHPGPGPPDS 82
Query: 365 QRSVQDLGEIQARN*GSQERASKESRRSQGC*ER*AATEKAKHPTRWNQHCYQAC*EEEG 544
+ Q ++QAR+ +E + +GC +R +A P+ Q+C+ E+EG
Sbjct: 83 YSAAQAGPQVQARDKAREEAEAAGPGXEEGCWQRGCPHXEATGPSSRGQYCHHLGGEQEG 142
Query: 545 TACGHR 562
+A R
Sbjct: 143 SAGSDR 148
>UniRef50_UPI000056487F Cluster: UPI000056487F related cluster; n=1;
Mus musculus|Rep: UPI000056487F UniRef100 entry - Mus
musculus
Length = 253
Score = 60.9 bits (141), Expect = 2e-08
Identities = 40/124 (32%), Positives = 61/124 (49%)
Frame = +3
Query: 189 KRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAK 368
K++ NF IG DIQ R L+ F+++ + ++ +L + K+P N FT LD+ A
Sbjct: 34 KKSPNFTIGLDIQHRRALTYFIKY-----LCEKRGILCEQFKIPT-FNYFTYALDQQIAT 87
Query: 369 GLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKKKAQ 548
+FK+ +YR E ++ P KR + G N +T VE K+AQ
Sbjct: 88 QVFKLSYEYRLEKKQTRLLATARKRDDGK---EKVPSKRASAFPTGVNIITTFVENKRAQ 144
Query: 549 LVVI 560
LVVI
Sbjct: 145 LVVI 148
>UniRef50_UPI0000DC13DB Cluster: UPI0000DC13DB related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC13DB UniRef100 entry -
Rattus norvegicus
Length = 200
Score = 57.6 bits (133), Expect = 2e-07
Identities = 36/102 (35%), Positives = 47/102 (46%)
Frame = +3
Query: 252 VRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXX 431
++WP Y +QRQ+ + K+ INQFT L+ L + K RP+T
Sbjct: 4 LKWPHYNWLQRQRVIPYMWFKISLEINQFTHALNWQIVIKLLMLARKSRPDTMQEKKRLL 63
Query: 432 XXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKKKAQLVV 557
D KRP RA NTV LVEKKKAQ+V+
Sbjct: 64 VHSEKKAADQGD-ISAKRPPIPRAEVNTVITLVEKKKAQMVI 104
>UniRef50_Q98RU4 Cluster: 60s ribosomal protein L7A; n=1; Guillardia
theta|Rep: 60s ribosomal protein L7A - Guillardia theta
(Cryptomonas phi)
Length = 206
Score = 54.0 bits (124), Expect = 2e-06
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +3
Query: 234 RDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEK 392
+D+ +F WPKYI IQRQ+ + ++K+P PI +FT+ L K LF L K
Sbjct: 41 KDIYKFKIWPKYISIQRQRKIFSTKMKIPFPIFRFTKVLGKNLTDNLFSYLVK 93
>UniRef50_Q07880 Cluster: Putative uncharacterized protein YLL044W
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YLL044W precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 148
Score = 47.6 bits (108), Expect = 2e-04
Identities = 32/98 (32%), Positives = 53/98 (54%)
Frame = -3
Query: 404 FWPVFLQDLEQTFGCGFI*CLGELVDWRRHFETTL*HSLLTLDANIFRPSHETG*ISGWL 225
FW V ++ LE + + EL + R+ ++ LL+L ++IF P +G +S WL
Sbjct: 39 FWSVLVEQLEGFSSGVSVQSVLELSNGWRNLQSDGQDLLLSLQSDIFWPFDVSGQVSLWL 98
Query: 224 DVLANSKVLCSLLE*RVYNLLGLNFLHHKWSGRYFFPY 111
D LAN++VL S + V +L+ L+ L +WS F +
Sbjct: 99 DSLANTEVLWSRVSQWVLSLVRLSGLSTEWSWSNFLTW 136
>UniRef50_UPI0000DA34B6 Cluster: PREDICTED: similar to 60S ribosomal
protein L7a (Surfeit locus protein 3); n=1; Rattus
norvegicus|Rep: PREDICTED: similar to 60S ribosomal
protein L7a (Surfeit locus protein 3) - Rattus
norvegicus
Length = 156
Score = 44.0 bits (99), Expect = 0.002
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +3
Query: 264 KYIRIQRQ----KAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXX 431
+YI++Q+Q + L ++LKVPP IN ++ LD TA L K+ K R E
Sbjct: 3 RYIQLQQQNNPPQKNLYKQLKVPPAINLLSEALDCETATQLLKVTHKCRAERKQEKQQRL 62
Query: 432 XXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKKKAQLVVI 560
+ P G VT L E KKA L+VI
Sbjct: 63 PAMLRRKLLAKGSSHSETP-AFPGGAFKVTNLAENKKALLLVI 104
>UniRef50_Q8SSG1 Cluster: 60S RIBOSOMAL PROTEIN L7A /yeast L8; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L7A
/yeast L8 - Encephalitozoon cuniculi
Length = 193
Score = 41.5 bits (93), Expect = 0.013
Identities = 27/95 (28%), Positives = 43/95 (45%)
Frame = +3
Query: 276 IQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXX 455
I+++ + L +++PP I QF L + K ++ KYRPE
Sbjct: 15 IKKKVSKLANSIRIPPAIYQFRTVLSEHDTKKFVELFMKYRPEN--------KQEKRIRL 66
Query: 456 XXXDEPPPKRPNTLRAGTNTVTKLVEKKKAQLVVI 560
D +P ++ G VT L+E KKA+LV+I
Sbjct: 67 QSEDPKKGPKPILVKFGLKHVTNLIETKKAKLVLI 101
>UniRef50_Q1GKA5 Cluster: Transcriptional regulator TetR family;
n=1; Silicibacter sp. TM1040|Rep: Transcriptional
regulator TetR family - Silicibacter sp. (strain TM1040)
Length = 203
Score = 41.1 bits (92), Expect = 0.017
Identities = 23/52 (44%), Positives = 30/52 (57%)
Frame = +2
Query: 224 PANQRSIPFRAMAEIYSHPASKGCVTASSQSAAANQPVHPDIR*NHSQRSVQ 379
P + I + AM EIYS +KGC+ S +A A P HP+IR +QR VQ
Sbjct: 89 PEDALRIIYTAMLEIYSGAHAKGCLVFS--TAVAEAPAHPEIRARLAQRLVQ 138
>UniRef50_UPI0000DC0A94 Cluster: UPI0000DC0A94 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0A94 UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 39.1 bits (87), Expect = 0.069
Identities = 42/126 (33%), Positives = 50/126 (39%)
Frame = +3
Query: 183 FEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTT 362
FEK+ KN G DIQ RD FV+WP Y I+ +V +FT L + T
Sbjct: 19 FEKKPKNAYAGWDIQAKRD-CHFVKWPGY-SIEGPSSVRGS--------CRFTWALGQQT 68
Query: 363 AKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKKK 542
A + RPE PP K NTVT LVE KK
Sbjct: 69 ATRQLNLAHSDRPEMNLAQEESHWQPKRLC------PPSK--------VNTVTTLVENKK 114
Query: 543 AQLVVI 560
QLVV+
Sbjct: 115 GQLVVV 120
>UniRef50_UPI0000DA4476 Cluster: PREDICTED: similar to 60S ribosomal
protein L7a; n=4; Eutheria|Rep: PREDICTED: similar to
60S ribosomal protein L7a - Rattus norvegicus
Length = 246
Score = 32.7 bits (71), Expect = 6.0
Identities = 18/24 (75%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +3
Query: 489 NTLR-AGTNTVTKLVEKKKAQLVV 557
N LR AG NTV LVE KKAQLVV
Sbjct: 113 NPLRKAGVNTVATLVENKKAQLVV 136
>UniRef50_Q6N1R6 Cluster: Transcriptional regulator, TetR family;
n=8; Alphaproteobacteria|Rep: Transcriptional regulator,
TetR family - Rhodopseudomonas palustris
Length = 226
Score = 32.3 bits (70), Expect = 8.0
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 215 PGH-PANQRSIPFRAMAEIYSHPASKGCVTASSQSAAANQPVHPDIR 352
PG PA I FR +A HP KGC + + AN P HP I+
Sbjct: 87 PGELPAKVEGI-FRNLARAARHPKWKGCGFLRTSAELANLPGHPAIK 132
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,351,479
Number of Sequences: 1657284
Number of extensions: 8829303
Number of successful extensions: 22493
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 21955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22464
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -