Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_E03
(494 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC131728-1|AAI31729.1| 985|Homo sapiens alanyl-tRNA synthetase ... 71 3e-12
BC033169-1|AAH33169.1| 785|Homo sapiens AARS2 protein protein. 71 3e-12
AB033096-1|BAA86584.1| 986|Homo sapiens KIAA1270 protein protein. 71 3e-12
AL353588-3|CAI40747.1| 985|Homo sapiens alanyl-tRNA synthetase ... 70 4e-12
D32050-1|BAA06808.1| 968|Homo sapiens alanyl-tRNA synthetase pr... 58 2e-08
BC011451-1|AAH11451.1| 968|Homo sapiens alanyl-tRNA synthetase ... 58 2e-08
AK222824-1|BAD96544.1| 968|Homo sapiens alanyl-tRNA synthetase ... 58 2e-08
AK090621-1|BAC03490.1| 516|Homo sapiens protein ( Homo sapiens ... 31 2.2
BX571740-1|CAE11866.1| 603|Homo sapiens hypothetical protein pr... 29 6.7
BC039089-1|AAH39089.1| 612|Homo sapiens RPGRIP1 protein protein. 29 6.7
AJ417067-1|CAD01135.1| 1286|Homo sapiens RPGR-interacting protei... 29 6.7
AJ417048-1|CAD01136.1| 1286|Homo sapiens RPGR-interacting protei... 29 6.7
AF265667-1|AAG10001.1| 645|Homo sapiens RPGR-interacting protei... 29 6.7
AF265666-1|AAG10000.1| 669|Homo sapiens RPGR-interacting protei... 29 6.7
AF260257-1|AAF91371.1| 902|Homo sapiens RPGR-interacting protei... 29 6.7
AF227257-1|AAG10246.1| 762|Homo sapiens RPGR-interacting protei... 29 6.7
>BC131728-1|AAI31729.1| 985|Homo sapiens alanyl-tRNA synthetase 2,
mitochondrial (putative) protein.
Length = 985
Score = 70.5 bits (165), Expect = 3e-12
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Frame = +2
Query: 41 PYSG--SYSNNAVLDCAYRRLADHARMISVCLADGAFPATS---LNLKQIMRKSFKISTD 205
PY G ++ D AYR +ADH R +SVC++DG FP S L L++I+R++ + S +
Sbjct: 304 PYLGRVGVADEGRTDTAYRVVADHIRTLSVCISDGVFPGMSGPPLVLRRILRRAVRFSME 363
Query: 206 VFKS-PNLLDHLYNEVASTLGSTYPELMTKEKEVKLIIEHERQAY 337
+ K+ P L L V TLG YPEL ++ ++ + A+
Sbjct: 364 ILKAPPGFLGSLVPVVVETLGDAYPELQRNSAQIANLVSEDEAAF 408
>BC033169-1|AAH33169.1| 785|Homo sapiens AARS2 protein protein.
Length = 785
Score = 70.5 bits (165), Expect = 3e-12
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Frame = +2
Query: 41 PYSG--SYSNNAVLDCAYRRLADHARMISVCLADGAFPATS---LNLKQIMRKSFKISTD 205
PY G ++ D AYR +ADH R +SVC++DG FP S L L++I+R++ + S +
Sbjct: 104 PYLGRVGVADEGRTDTAYRVVADHIRTLSVCISDGVFPGMSGPPLVLRRILRRAVRFSME 163
Query: 206 VFKS-PNLLDHLYNEVASTLGSTYPELMTKEKEVKLIIEHERQAY 337
+ K+ P L L V TLG YPEL ++ ++ + A+
Sbjct: 164 ILKAPPGFLGSLVPVVVETLGDAYPELQRNSAQIANLVSEDEAAF 208
>AB033096-1|BAA86584.1| 986|Homo sapiens KIAA1270 protein protein.
Length = 986
Score = 70.5 bits (165), Expect = 3e-12
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Frame = +2
Query: 41 PYSG--SYSNNAVLDCAYRRLADHARMISVCLADGAFPATS---LNLKQIMRKSFKISTD 205
PY G ++ D AYR +ADH R +SVC++DG FP S L L++I+R++ + S +
Sbjct: 305 PYLGRVGVADEGRTDTAYRVVADHIRTLSVCISDGVFPGMSGPPLVLRRILRRAVRFSME 364
Query: 206 VFKS-PNLLDHLYNEVASTLGSTYPELMTKEKEVKLIIEHERQAY 337
+ K+ P L L V TLG YPEL ++ ++ + A+
Sbjct: 365 ILKAPPGFLGSLVPVVVETLGDAYPELQRNSAQIANLVSEDEAAF 409
>AL353588-3|CAI40747.1| 985|Homo sapiens alanyl-tRNA synthetase 2,
mitochondrial (putative) protein.
Length = 985
Score = 70.1 bits (164), Expect = 4e-12
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Frame = +2
Query: 41 PYSG--SYSNNAVLDCAYRRLADHARMISVCLADGAFPATS---LNLKQIMRKSFKISTD 205
PY G ++ D AYR +ADH R +SVC++DG FP S L L++I+R++ + S +
Sbjct: 304 PYLGRVGVADEGRTDTAYRVVADHIRTLSVCISDGIFPGMSGPPLVLRRILRRAVRFSME 363
Query: 206 VFKS-PNLLDHLYNEVASTLGSTYPELMTKEKEVKLIIEHERQAY 337
+ K+ P L L V TLG YPEL ++ ++ + A+
Sbjct: 364 ILKAPPGFLGSLVPVVVETLGDAYPELQRNSAQIANLVSEDEAAF 408
>D32050-1|BAA06808.1| 968|Homo sapiens alanyl-tRNA synthetase
protein.
Length = 968
Score = 57.6 bits (133), Expect = 2e-08
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Frame = +2
Query: 11 AIEKNSKGVSPYSGSYSNNAV--LDCAYRRLADHARMISVCLADGAFP---ATSLNLKQI 175
AI+K + G PY+G +D AYR LADHAR I+V LADG P L++I
Sbjct: 269 AIQKGT-GARPYTGKVGAEDADGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRI 327
Query: 176 MRKSFKISTDVFK-SPNLLDHLYNEVASTLGSTYPELMTKEKEVKLIIEHERQAYSK 343
+R++ + + + S L + V +LG +PEL VK II E + K
Sbjct: 328 LRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKKDPDMVKDIINEEEVQFLK 384
>BC011451-1|AAH11451.1| 968|Homo sapiens alanyl-tRNA synthetase
protein.
Length = 968
Score = 57.6 bits (133), Expect = 2e-08
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Frame = +2
Query: 11 AIEKNSKGVSPYSGSYSNNAV--LDCAYRRLADHARMISVCLADGAFP---ATSLNLKQI 175
AI+K + G PY+G +D AYR LADHAR I+V LADG P L++I
Sbjct: 269 AIQKGT-GARPYTGKVGAEDADGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRI 327
Query: 176 MRKSFKISTDVFK-SPNLLDHLYNEVASTLGSTYPELMTKEKEVKLIIEHERQAYSK 343
+R++ + + + S L + V +LG +PEL VK II E + K
Sbjct: 328 LRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKKDPDMVKDIINEEEVQFLK 384
>AK222824-1|BAD96544.1| 968|Homo sapiens alanyl-tRNA synthetase
variant protein.
Length = 968
Score = 57.6 bits (133), Expect = 2e-08
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Frame = +2
Query: 11 AIEKNSKGVSPYSGSYSNNAV--LDCAYRRLADHARMISVCLADGAFP---ATSLNLKQI 175
AI+K + G PY+G +D AYR LADHAR I+V LADG P L++I
Sbjct: 269 AIQKGT-GARPYTGKVGAEDADGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRI 327
Query: 176 MRKSFKISTDVFK-SPNLLDHLYNEVASTLGSTYPELMTKEKEVKLIIEHERQAYSK 343
+R++ + + + S L + V +LG +PEL VK II E + K
Sbjct: 328 LRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKKDPDMVKDIINEEEVQFLK 384
>AK090621-1|BAC03490.1| 516|Homo sapiens protein ( Homo sapiens
cDNA FLJ33302 fis, clone BNGH42002387, weakly similar to
RIBONUCLEASE INHIBITOR. ).
Length = 516
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = -3
Query: 441 PSVKPPNSTSLITSTSGYRDINSLHFLAKPARILEYACLSCSIINFTSFSLV 286
P ++P S +++ SG+ D+ L LA+ R L Y ++C+ I+ FSL+
Sbjct: 144 PLIRPTARLSYVSTASGFEDL--LKALAR-NRSLTYLSINCTSISLNMFSLL 192
>BX571740-1|CAE11866.1| 603|Homo sapiens hypothetical protein
protein.
Length = 603
Score = 29.5 bits (63), Expect = 6.7
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +2
Query: 194 ISTDVFKSPNLLDHLYNEVASTLGSTYPELMTKEKEVKLIIEHERQAYSKMRAGFAKKWR 373
+S K L + ++ +S GS E T + + +I+ Q Y K A K
Sbjct: 381 LSHSALKQKEPLHPVNDKESSEQGSEVSEAQTTDSD-DVIVPPMSQKYPK--ADSEKMCI 437
Query: 374 ELISR--YPEVEVMSDVEFGGFTLGYKEFKETMSK 472
E++S YPE EVMSD + YK + +S+
Sbjct: 438 EIVSLAFYPEAEVMSDENIKQVYVEYKFYDLPLSE 472
>BC039089-1|AAH39089.1| 612|Homo sapiens RPGRIP1 protein protein.
Length = 612
Score = 29.5 bits (63), Expect = 6.7
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +2
Query: 194 ISTDVFKSPNLLDHLYNEVASTLGSTYPELMTKEKEVKLIIEHERQAYSKMRAGFAKKWR 373
+S K L + ++ +S GS E T + + +I+ Q Y K A K
Sbjct: 390 LSHSALKQKEPLHPVNDKESSEQGSEVSEAQTTDSD-DVIVPPMSQKYPK--ADSEKMCI 446
Query: 374 ELISR--YPEVEVMSDVEFGGFTLGYKEFKETMSK 472
E++S YPE EVMSD + YK + +S+
Sbjct: 447 EIVSLAFYPEAEVMSDENIKQVYVEYKFYDLPLSE 481
>AJ417067-1|CAD01135.1| 1286|Homo sapiens RPGR-interacting protein 1
protein.
Length = 1286
Score = 29.5 bits (63), Expect = 6.7
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +2
Query: 194 ISTDVFKSPNLLDHLYNEVASTLGSTYPELMTKEKEVKLIIEHERQAYSKMRAGFAKKWR 373
+S K L + ++ +S GS E T + + +I+ Q Y K A K
Sbjct: 1064 LSHSALKQKEPLHPVNDKESSEQGSEVSEAQTTDSD-DVIVPPMSQKYPK--ADSEKMCI 1120
Query: 374 ELISR--YPEVEVMSDVEFGGFTLGYKEFKETMSK 472
E++S YPE EVMSD + YK + +S+
Sbjct: 1121 EIVSLAFYPEAEVMSDENIKQVYVEYKFYDLPLSE 1155
>AJ417048-1|CAD01136.1| 1286|Homo sapiens RPGR-interacting protein 1
protein.
Length = 1286
Score = 29.5 bits (63), Expect = 6.7
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +2
Query: 194 ISTDVFKSPNLLDHLYNEVASTLGSTYPELMTKEKEVKLIIEHERQAYSKMRAGFAKKWR 373
+S K L + ++ +S GS E T + + +I+ Q Y K A K
Sbjct: 1064 LSHSALKQKEPLHPVNDKESSEQGSEVSEAQTTDSD-DVIVPPMSQKYPK--ADSEKMCI 1120
Query: 374 ELISR--YPEVEVMSDVEFGGFTLGYKEFKETMSK 472
E++S YPE EVMSD + YK + +S+
Sbjct: 1121 EIVSLAFYPEAEVMSDENIKQVYVEYKFYDLPLSE 1155
>AF265667-1|AAG10001.1| 645|Homo sapiens RPGR-interacting protein 1
isoform b protein.
Length = 645
Score = 29.5 bits (63), Expect = 6.7
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +2
Query: 194 ISTDVFKSPNLLDHLYNEVASTLGSTYPELMTKEKEVKLIIEHERQAYSKMRAGFAKKWR 373
+S K L + ++ +S GS E T + + +I+ Q Y K A K
Sbjct: 423 LSHSALKQKEPLHPVNDKESSEQGSEVSEAQTTDSD-DVIVPPMSQKYPK--ADSEKMCI 479
Query: 374 ELISR--YPEVEVMSDVEFGGFTLGYKEFKETMSK 472
E++S YPE EVMSD + YK + +S+
Sbjct: 480 EIVSLAFYPEAEVMSDENIKQVYVEYKFYDLPLSE 514
>AF265666-1|AAG10000.1| 669|Homo sapiens RPGR-interacting protein 1
isoform a protein.
Length = 669
Score = 29.5 bits (63), Expect = 6.7
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +2
Query: 194 ISTDVFKSPNLLDHLYNEVASTLGSTYPELMTKEKEVKLIIEHERQAYSKMRAGFAKKWR 373
+S K L + ++ +S GS E T + + +I+ Q Y K A K
Sbjct: 447 LSHSALKQKEPLHPVNDKESSEQGSEVSEAQTTDSD-DVIVPPMSQKYPK--ADSEKMCI 503
Query: 374 ELISR--YPEVEVMSDVEFGGFTLGYKEFKETMSK 472
E++S YPE EVMSD + YK + +S+
Sbjct: 504 EIVSLAFYPEAEVMSDENIKQVYVEYKFYDLPLSE 538
>AF260257-1|AAF91371.1| 902|Homo sapiens RPGR-interacting protein
protein.
Length = 902
Score = 29.5 bits (63), Expect = 6.7
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +2
Query: 194 ISTDVFKSPNLLDHLYNEVASTLGSTYPELMTKEKEVKLIIEHERQAYSKMRAGFAKKWR 373
+S K L + ++ +S GS E T + + +I+ Q Y K A K
Sbjct: 680 LSHSALKQKEPLHPVNDKESSEQGSEVSEAQTTDSD-DVIVPPMSQKYPK--ADSEKMCI 736
Query: 374 ELISR--YPEVEVMSDVEFGGFTLGYKEFKETMSK 472
E++S YPE EVMSD + YK + +S+
Sbjct: 737 EIVSLAFYPEAEVMSDENIKQVYVEYKFYDLPLSE 771
>AF227257-1|AAG10246.1| 762|Homo sapiens RPGR-interacting protein-1
protein.
Length = 762
Score = 29.5 bits (63), Expect = 6.7
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +2
Query: 194 ISTDVFKSPNLLDHLYNEVASTLGSTYPELMTKEKEVKLIIEHERQAYSKMRAGFAKKWR 373
+S K L + ++ +S GS E T + + +I+ Q Y K A K
Sbjct: 540 LSHSALKQKEPLHPVNDKESSEQGSEVSEAQTTDSD-DVIVPPMSQKYPK--ADSEKMCI 596
Query: 374 ELISR--YPEVEVMSDVEFGGFTLGYKEFKETMSK 472
E++S YPE EVMSD + YK + +S+
Sbjct: 597 EIVSLAFYPEAEVMSDENIKQVYVEYKFYDLPLSE 631
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,194,715
Number of Sequences: 237096
Number of extensions: 1437591
Number of successful extensions: 2715
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2710
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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