Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_E01
(499 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY280612-1|AAQ21365.1| 309|Anopheles gambiae carbonic anhydrase... 26 0.62
AF395079-1|AAK97461.1| 371|Anopheles gambiae basic helix-loop-h... 26 0.82
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 26 0.82
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 25 1.4
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 25 1.9
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 24 2.5
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 24 2.5
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 24 3.3
AF469165-1|AAL68692.1| 226|Anopheles gambiae amylase protein. 24 3.3
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 4.4
DQ437579-1|ABD96049.1| 575|Anopheles gambiae short neuropeptide... 23 5.8
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 23 7.6
>AY280612-1|AAQ21365.1| 309|Anopheles gambiae carbonic anhydrase
protein.
Length = 309
Score = 26.2 bits (55), Expect = 0.62
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 112 HPAPGRLGTDTDDTVFAGQQDGGRR-VPGQLHIRVPRRRQRSPV 240
+P PG G ++ + GQ D GRR P L I R Q +P+
Sbjct: 25 YPTPGTNGVMSEPERWGGQCDNGRRQSPIDLTIAAAVRGQFAPL 68
>AF395079-1|AAK97461.1| 371|Anopheles gambiae basic
helix-loop-helix transcriptionfactor ASH protein.
Length = 371
Score = 25.8 bits (54), Expect = 0.82
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 373 GDVTDNNA*RHVGQ*QLSHHVHQHR 447
G TDNN Q Q HH HQH+
Sbjct: 293 GSATDNNNYILAQQQQQQHHHHQHQ 317
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 25.8 bits (54), Expect = 0.82
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 194 PGTRRPPSCCPANTVSSVSVPSRPGAG*ASLASR 93
PG PP+C A ++S + +R A AS+ R
Sbjct: 18 PGLSNPPTCTSAKMMASSGMSTRASARSASVDCR 51
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 25.0 bits (52), Expect = 1.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 465 ALSGHTPMLVNVMGQLLLAHVTSRIV 388
A+SGHTP++V LL S I+
Sbjct: 298 AISGHTPLIVIFFSNTLLLTAFSTII 323
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 24.6 bits (51), Expect = 1.9
Identities = 11/39 (28%), Positives = 16/39 (41%)
Frame = +1
Query: 79 DGVRSRLARDAHPAPGRLGTDTDDTVFAGQQDGGRRVPG 195
DG A P P DD + + ++GG R+ G
Sbjct: 12 DGANKAAAPQQAPEPMDADAADDDALMSEDEEGGTRIGG 50
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.2 bits (50), Expect = 2.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 377 TSPTTMRDVTWASNNCPITFTSIGVWPESADGTDINSCT 493
++PTT TW+ P T T+ VW +S T ++ T
Sbjct: 166 SAPTTT--TTWSDQPRPPTTTTTTVWTDSTATTTTHAPT 202
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 24.2 bits (50), Expect = 2.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 340 TLVLEREHVQAGDVTDNNA*RHVGQ*QLSHHVHQHR 447
T VL +H RH+ Q Q HH+HQ +
Sbjct: 597 TTVLLSDHYLPLQQQQQQQARHLPQQQAIHHIHQQQ 632
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.8 bits (49), Expect = 3.3
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 377 TSPTTMRDVTWASNNCPITFTSIGVWPESADGTDINSCT 493
++PTT TW+ P T T+ VW +S T + T
Sbjct: 166 SAPTTT--TTWSDQPPPPTTTTTTVWTDSTATTTTPAST 202
>AF469165-1|AAL68692.1| 226|Anopheles gambiae amylase protein.
Length = 226
Score = 23.8 bits (49), Expect = 3.3
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -1
Query: 442 AGERDGTVVTGPR 404
+GERDGT+ TG R
Sbjct: 186 SGERDGTMCTGTR 198
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.4 bits (48), Expect = 4.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 85 HHPLAGEAAHRHH 47
HH A AAH HH
Sbjct: 865 HHQAAAVAAHHHH 877
>DQ437579-1|ABD96049.1| 575|Anopheles gambiae short neuropeptide F
receptor protein.
Length = 575
Score = 23.0 bits (47), Expect = 5.8
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 313 VLAIFGPVQVCYV 275
VL +FG V VCYV
Sbjct: 107 VLGVFGNVLVCYV 119
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 22.6 bits (46), Expect = 7.6
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -3
Query: 380 TSPACTCSRSRTRVRNPRNCS*CTGYLRTSPGVL-CSSSDPG 258
T PAC C S P C+G+ G C+ ++ G
Sbjct: 623 TGPACDCRASNETCMPPGGGELCSGHGTCECGTCRCTVTEDG 664
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,658
Number of Sequences: 2352
Number of extensions: 12455
Number of successful extensions: 33
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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