Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_D24
         (115 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q67640 Cluster: Protein kinase; n=3; Alphaherpesvirinae...    32   2.2  

>UniRef50_Q67640 Cluster: Protein kinase; n=3;
           Alphaherpesvirinae|Rep: Protein kinase - Gallid
           herpesvirus 1
          Length = 476

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +1

Query: 16  PRCSLESYNFSHYHDIKMAAQTVPKLLSNL 105
           P C+L  YN+ HY  I  A  TVP L+ NL
Sbjct: 383 PPCNL--YNYLHYASIDRAGHTVPSLIRNL 410


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,382,459
Number of Sequences: 1657284
Number of extensions: 929349
Number of successful extensions: 2274
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2274
length of database: 575,637,011
effective HSP length: 18
effective length of database: 545,805,899
effective search space used: 10370312081
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)