Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_D23
(554 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 215 6e-55
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 206 2e-52
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 184 9e-46
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 172 5e-42
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 170 2e-41
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 170 2e-41
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 167 2e-40
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 167 2e-40
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 161 1e-38
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 159 4e-38
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 142 5e-33
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 138 6e-32
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 137 2e-31
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 136 4e-31
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 133 2e-30
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 122 4e-27
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 108 1e-22
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 84 2e-15
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 81 2e-14
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 79 5e-14
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 74 3e-12
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 71 1e-11
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 66 5e-10
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 61 2e-08
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 60 3e-08
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 57 2e-07
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 51 2e-05
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 48 1e-04
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 44 0.002
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 43 0.004
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.12
UniRef50_Q08Q80 Cluster: Putative uncharacterized protein; n=1; ... 38 0.21
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 0.84
UniRef50_Q5KIH1 Cluster: Putative uncharacterized protein; n=1; ... 36 0.84
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 35 1.1
UniRef50_A2R4J7 Cluster: Similarity to other proteins; n=11; Eur... 34 1.9
UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA meth... 33 3.4
UniRef50_UPI0000EBD2B3 Cluster: PREDICTED: hypothetical protein;... 33 4.5
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 4.5
UniRef50_UPI0000DD80EA Cluster: PREDICTED: hypothetical protein;... 33 5.9
UniRef50_Q47KQ6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 33 5.9
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 33 5.9
UniRef50_UPI0000F2DA02 Cluster: PREDICTED: similar to ZP1; n=1; ... 32 7.8
UniRef50_UPI0000F200AE Cluster: PREDICTED: hypothetical protein;... 32 7.8
UniRef50_Q21YT9 Cluster: Putative uncharacterized protein; n=1; ... 32 7.8
UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Re... 32 7.8
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 215 bits (525), Expect = 6e-55
Identities = 101/158 (63%), Positives = 116/158 (73%)
Frame = +1
Query: 79 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAG 258
++ ARPL+SVYSEK E +G ++ LP VFKAPIRPD+VN VH ++ KN RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 259 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 438
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 439 XXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDK 552
++GH +E++PELPLVV DK
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDK 157
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 206 bits (504), Expect = 2e-52
Identities = 98/160 (61%), Positives = 115/160 (71%)
Frame = +1
Query: 73 MSLSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKE 252
MSL ARPLVSVY+EK+E ++ LP VFKAPIRPD+VN+VH + +N RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 253 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 432
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 433 XXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDK 552
Q++GH+++ + E PLVVSD+
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDE 160
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 184 bits (449), Expect = 9e-46
Identities = 86/155 (55%), Positives = 103/155 (66%)
Frame = +1
Query: 88 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 267
+RP VSV S G ++PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 268 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 447
SAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 62 SAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRF 121
Query: 448 XXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDK 552
ARGH + ++ E+PLV++ +
Sbjct: 122 ATVSALAASGVPALLFARGHQISEVAEVPLVINSE 156
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 172 bits (418), Expect = 5e-42
Identities = 79/104 (75%), Positives = 88/104 (84%)
Frame = +1
Query: 106 VYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWG 285
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWG
Sbjct: 127 VYNDKSEPT-DTQIRLPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWG 185
Query: 286 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 186 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 170 bits (414), Expect = 2e-41
Identities = 83/158 (52%), Positives = 101/158 (63%)
Frame = +1
Query: 79 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAG 258
++ ARP+VSV+ A +S+PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 259 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 438
HQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 61 HQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTE 120
Query: 439 XXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDK 552
ARGH + +PELPLV+S++
Sbjct: 121 KRHAVAAAIAATGCPSLVMARGHRINNVPELPLVISNE 158
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 170 bits (413), Expect = 2e-41
Identities = 84/154 (54%), Positives = 99/154 (64%)
Frame = +1
Query: 88 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 267
ARP VSVYS S+ V G + PLP VF APIR D+V VH +M+KN+RQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVG-TCPLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNH 61
Query: 268 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 447
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRF 121
Query: 448 XXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSD 549
+RGH + +PE+PLVV D
Sbjct: 122 AVVSALAASSVPSLVMSRGHQIGNVPEVPLVVED 155
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 167 bits (406), Expect = 2e-40
Identities = 78/155 (50%), Positives = 100/155 (64%)
Frame = +1
Query: 85 VARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQ 264
V RP+VSV+S +E G+++ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 265 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 444
TSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 61 TSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKR 120
Query: 445 XXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSD 549
+RGH VE +PELPLV+ D
Sbjct: 121 LALAVSVAATASVPLVMSRGHRVESVPELPLVLDD 155
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 167 bits (406), Expect = 2e-40
Identities = 81/154 (52%), Positives = 98/154 (63%), Gaps = 1/154 (0%)
Frame = +1
Query: 94 PLVSVYS-EKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTS 270
PLVSV+S + S V +PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q S
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
Query: 271 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 450
AESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 65 AESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHA 124
Query: 451 XXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDK 552
ARGH + ++P++PLVV DK
Sbjct: 125 AATAVAATGIVPLVLARGHRISQVPQIPLVVEDK 158
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 161 bits (390), Expect = 1e-38
Identities = 77/153 (50%), Positives = 97/153 (63%)
Frame = +1
Query: 91 RPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTS 270
RP VSV++ GA+L +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTS
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
Query: 271 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 450
A SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 63 ARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQA 122
Query: 451 XXXXXXXXXXXXXXQARGHIVEKIPELPLVVSD 549
+RGH +E + E+P+VV D
Sbjct: 123 LASALAATAVVPVVMSRGHRIEALREVPMVVDD 155
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 159 bits (386), Expect = 4e-38
Identities = 78/157 (49%), Positives = 95/157 (60%)
Frame = +1
Query: 79 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAG 258
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVG-EVEIPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 259 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 438
++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 60 YETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKINLKE 119
Query: 439 XXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSD 549
ARGH + + E+PLV S+
Sbjct: 120 KRYAVCSSIAASGITSLVLARGHRISNLKEVPLVASN 156
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 142 bits (344), Expect = 5e-33
Identities = 69/151 (45%), Positives = 91/151 (60%)
Frame = +1
Query: 97 LVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAE 276
L +VY+ + ++P + +PIRPD+V+ VH++++KN RQP+ AGHQ SAE
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAE 65
Query: 277 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXX 456
SWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 66 SWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMC 125
Query: 457 XXXXXXXXXXXXQARGHIVEKIPELPLVVSD 549
ARGH ++ +PELPLVVSD
Sbjct: 126 SAIAASSNPSLVLARGHKIDNVPELPLVVSD 156
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 138 bits (335), Expect = 6e-32
Identities = 70/149 (46%), Positives = 86/149 (57%)
Frame = +1
Query: 103 SVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESW 282
+VYS ++ L +P VF + IR D+V VH +M KN RQ Y VS AG TSA SW
Sbjct: 5 NVYSCNKNIID--KLKIPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSW 62
Query: 283 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 462
GTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 63 GTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSA 122
Query: 463 XXXXXXXXXXQARGHIVEKIPELPLVVSD 549
+RG+ V+ IPE+P V+ D
Sbjct: 123 IASSSIVSIIVSRGYRVKTIPEIPFVIED 151
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 137 bits (331), Expect = 2e-31
Identities = 70/155 (45%), Positives = 91/155 (58%)
Frame = +1
Query: 88 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 267
+RP V++Y + + LP VF APIR D+V+ V+ + SKN RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 268 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 447
SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 63 SAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRF 122
Query: 448 XXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDK 552
ARGH + +P++PLVV+ K
Sbjct: 123 AVASCIAASAVPALVSARGHHIAGVPQIPLVVNSK 157
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 136 bits (328), Expect = 4e-31
Identities = 69/145 (47%), Positives = 80/145 (55%)
Frame = +1
Query: 115 EKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGR 294
E V +L LP VF PIR DLV + RQPY VSK AG Q SAESWGTGR
Sbjct: 9 EADGVTVKKTLDLPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGR 68
Query: 295 AVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXX 474
A+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 69 AIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAMAVAAS 128
Query: 475 XXXXXXQARGHIVEKIPELPLVVSD 549
+ARGH + + LP++VSD
Sbjct: 129 AQASLVEARGHRISDVKMLPIIVSD 153
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 133 bits (322), Expect = 2e-30
Identities = 61/110 (55%), Positives = 70/110 (63%)
Frame = +1
Query: 217 KNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 396
++ + V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
Query: 397 KPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVS 546
K WR+WH ARGH V +PE+PLV+S
Sbjct: 82 KVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEVPLVIS 131
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 122 bits (295), Expect = 4e-27
Identities = 60/155 (38%), Positives = 91/155 (58%)
Frame = +1
Query: 85 VARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQ 264
++R V+V +++ + +++ LP VF PIR ++V +V+V+++KNA+QP+ AG +
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Query: 265 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 444
SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 59 VSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRK 118
Query: 445 XXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSD 549
QARGH++ ++ E+P+VV D
Sbjct: 119 FAIASAIAATAVVPLVQARGHVLGEVKEVPIVVVD 153
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 108 bits (259), Expect = 1e-22
Identities = 61/150 (40%), Positives = 74/150 (49%)
Frame = +1
Query: 94 PLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSA 273
P V V+ VA LP P VF P+RPD++N VH + K R PY VS+ AG Q +A
Sbjct: 3 PTVKVFGPTGTQVA--ELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTA 60
Query: 274 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXX 453
SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 61 HSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAV 114
Query: 454 XXXXXXXXXXXXXQARGHIVEKIPELPLVV 543
+ARGH + +P +PLVV
Sbjct: 115 ASALAASANAALVEARGHRIADVPSIPLVV 144
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 83.8 bits (198), Expect = 2e-15
Identities = 46/138 (33%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Frame = +1
Query: 142 SLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVR 321
++ LP F+ P+R DL+ ++ N RQPY AG +TSAESWG G VA +PRV+
Sbjct: 15 TVELPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAESWGAGHGVAMVPRVK 74
Query: 322 GGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQA 498
G +G+ A GG + APT P + W +
Sbjct: 75 GRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKERRAALRSALAATAKPEFVKE 133
Query: 499 RGHIVEKIPELPLVVSDK 552
RGH+++ +P LP+VV D+
Sbjct: 134 RGHVIDDVPHLPVVVVDE 151
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 81.0 bits (191), Expect = 2e-14
Identities = 34/97 (35%), Positives = 53/97 (54%)
Frame = +1
Query: 253 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 432
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNR 118
Query: 433 XXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVV 543
+RGH ++ + P+++
Sbjct: 119 KVKVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMII 155
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 79.4 bits (187), Expect = 5e-14
Identities = 52/148 (35%), Positives = 67/148 (45%)
Frame = +1
Query: 100 VSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAES 279
+ VY VA PL F+ PIRPDL+ ++S QP V + AG + S ES
Sbjct: 29 LKVYGIDGAYVADIEAPLHFL--EPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCES 86
Query: 280 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 459
+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 87 FGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRS 143
Query: 460 XXXXXXXXXXXQARGHIVEKIPELPLVV 543
ARGH+VEK+P LP+VV
Sbjct: 144 AIAATAYRSWVAARGHVVEKVPSLPVVV 171
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 73.7 bits (173), Expect = 3e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1
Query: 184 DLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 330
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 71.3 bits (167), Expect = 1e-11
Identities = 43/151 (28%), Positives = 70/151 (46%)
Frame = +1
Query: 100 VSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAES 279
++VYS K ++ + LP +F+ RPD++ +SM QP+ AG +T+AES
Sbjct: 4 INVYSLKGDITE--EIELPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAES 61
Query: 280 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 459
+G+GR A +PRV+G S + AF GGR P + +H
Sbjct: 62 FGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAIRS 116
Query: 460 XXXXXXXXXXXQARGHIVEKIPELPLVVSDK 552
+ RGH V ++ ++P V+ D+
Sbjct: 117 AIAATANKELVEQRGHQVSELEQIPFVIDDE 147
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 66.1 bits (154), Expect = 5e-10
Identities = 45/140 (32%), Positives = 59/140 (42%), Gaps = 2/140 (1%)
Frame = +1
Query: 136 GASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWG--TGRAVARI 309
G + LP VF P R DL+ + + + QP AG SA+S TG ARI
Sbjct: 13 GKEITLPPVFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQARI 72
Query: 310 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 489
R++GGG R G+ RGGR P K + H
Sbjct: 73 ARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAIAATASKST 132
Query: 490 XQARGHIVEKIPELPLVVSD 549
RGHI++ I ELP+V+SD
Sbjct: 133 VAGRGHIIDGI-ELPIVISD 151
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 60.9 bits (141), Expect = 2e-08
Identities = 39/101 (38%), Positives = 53/101 (52%)
Frame = +1
Query: 97 LVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAE 276
+V VY E+ S+ LP +F+ P+R DL+ +S QP AG +TSA
Sbjct: 15 IVPVYDERGG--EKDSVVLPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAV 72
Query: 277 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 399
S G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 73 SLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 60.5 bits (140), Expect = 3e-08
Identities = 38/133 (28%), Positives = 59/133 (44%)
Frame = +1
Query: 151 LPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 330
LP +F P+R DL+ V ++ ++ QP AG +TSAES+G +AR+PRV+
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVK--- 81
Query: 331 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 510
SG+ A GGR+ P ++ +ARGH+
Sbjct: 82 --NSGEAALAPNTVGGRLAFPPSVNKKLAEEANVKEKRLAVISALSATADIAFVRARGHV 139
Query: 511 VEKIPELPLVVSD 549
+ P+VV+D
Sbjct: 140 FKDSVRFPIVVTD 152
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 57.2 bits (132), Expect = 2e-07
Identities = 43/149 (28%), Positives = 62/149 (41%)
Frame = +1
Query: 106 VYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWG 285
V + K EV + LP VF RPD++ +++ + RQPY + +G S E+WG
Sbjct: 5 VLNLKGEVTE--EIELPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWG 62
Query: 286 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXX 465
G AR+PR + G + GGR P KP R+W
Sbjct: 63 PGHGYARVPRWKLG-----RRAVVVPQAVGGRRAHPPKPERKWAEKINKKEMRKALKSAI 117
Query: 466 XXXXXXXXXQARGHIVEKIPELPLVVSDK 552
+ R H+ E ELP VVS++
Sbjct: 118 AATANEELVRQRSHVFE--GELPKVVSNE 144
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 51.2 bits (117), Expect = 2e-05
Identities = 44/149 (29%), Positives = 57/149 (38%), Gaps = 11/149 (7%)
Frame = +1
Query: 136 GASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIP- 312
GAS +P VF +PIR D+VN VH ++KN + E +S G +P
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKND----STTDEIQLCFLLDSQGKRTPCTDVPA 70
Query: 313 -RVRGGGTHRSGQGAFGNMCRGGRMFAPTK---------PWRRWHXXXXXXXXXXXXXXX 462
+ R + +CR AP K WRRWH
Sbjct: 71 TKPRPSPGAPVARSLVFRVCRAVVPTAPVKGRSVTCAAVTWRRWHRRVNIKEKRYAVCSA 130
Query: 463 XXXXXXXXXXQARGHIVEKIPELPLVVSD 549
ARGH VE +PE+PLVV D
Sbjct: 131 IAASAVPSLLLARGHRVEGVPEVPLVVDD 159
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +1
Query: 151 LPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 324
LP VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ G
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKQDG 75
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = +1
Query: 100 VSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAES 279
V +YS E+ + LP VF +R D++ ++S + RQPY S AG + +
Sbjct: 5 VPIYSVSGEMKG--EIDLPEVFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHT 62
Query: 280 WGTGRAVARIPRVRGG 327
G ++R+PR+ GG
Sbjct: 63 TRPGLGISRMPRIAGG 78
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 43.2 bits (97), Expect = 0.004
Identities = 40/147 (27%), Positives = 53/147 (36%), Gaps = 7/147 (4%)
Frame = +1
Query: 124 EVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSK-------EAGHQTSAESW 282
E G ++ LP VF IR DL+ ++ N RQ Y + +AG + S E W
Sbjct: 41 EAKNGKAVTLPDVFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWW 100
Query: 283 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 462
G GR V+RI R G T A RGGR K + W
Sbjct: 101 GKGRGVSRIMRKAGQRT-----AAQNPHTRGGRRAHGPKVDKDWSQKINSKENRIARDSA 155
Query: 463 XXXXXXXXXXQARGHIVEKIPELPLVV 543
RGH E P+++
Sbjct: 156 IAASASSNLVSERGHHFEASLRFPIII 182
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 38.3 bits (85), Expect = 0.12
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -1
Query: 398 LVGANIRPPRHMLPNAPCP 342
LVGANI PPRHMLP AP P
Sbjct: 106 LVGANILPPRHMLPKAPWP 124
>UniRef50_Q08Q80 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 596
Score = 37.5 bits (83), Expect = 0.21
Identities = 34/103 (33%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Frame = -1
Query: 377 PPRHMLPNAPCPDLWV--PPPRTRGIRATARPVPQDSALV**PASLLTQ*GWRAFFDIDT 204
PP LP P PD +V PPP+ G A PVP L P L + G A F +
Sbjct: 352 PPGEALPPEPVPDSFVAEPPPQAAGFAPQAGPVPTLGELA--PLLPLAEAGAAATFSV-- 407
Query: 203 WTSLTRSGLMGALNTNGRGSEAPATTSLFS-EYTDTKGRATDR 78
W + + G L G A + F E +GRATD+
Sbjct: 408 WPAGCSVRVEGQLLIRLEGLVAFSGNLTFQPEMKRFRGRATDK 450
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 0.84
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +1
Query: 301 ARIPRVRGGGTHRSGQGAFGNMCRGG 378
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_Q5KIH1 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1015
Score = 35.5 bits (78), Expect = 0.84
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 208 IRGHH*RGQV*WAP*IQTGGGAKPLRRPHSSPNTPTLKVGLL 83
+R H + + WA +Q G+KP RP+S PNTP + G+L
Sbjct: 715 VREHAIKAERKWAV-LQAPAGSKPTSRPNSLPNTPQQRFGVL 755
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 35.1 bits (77), Expect = 1.1
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +1
Query: 211 MSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 381
+++ A ++E G A+SW TGRA A + R R GG R A N G R
Sbjct: 18 LARAAASSVAANREGGG--GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_A2R4J7 Cluster: Similarity to other proteins; n=11;
Eurotiomycetidae|Rep: Similarity to other proteins -
Aspergillus niger
Length = 1372
Score = 34.3 bits (75), Expect = 1.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 389 ANIRPPRHMLPNAPCPDLWVPPPRTRGIRATARPVPQDSA 270
AN P + P + P + VPPP + ATA P P +A
Sbjct: 635 ANQTPNNYPQPTSTTPSVQVPPPAAAAVAATASPAPAPAA 674
>UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1;
Ralstonia pickettii 12J|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 453
Score = 33.9 bits (74), Expect = 2.6
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 217 KNARQPYCVSKEAGH-QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC-RGGRM 384
+NA P V+KEAGH Q +A G V R+ + GTH G+G GN RGG +
Sbjct: 49 ENAHGPQHVAKEAGHLQAAAFGNGLDHQVGRVADI-SVGTHEHGRG--GNRAQRGGAL 103
>UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA
methylase; n=1; Oceanicaulis alexandrii HTCC2633|Rep:
Probable C-5 cytosine-specific DNA methylase -
Oceanicaulis alexandrii HTCC2633
Length = 681
Score = 33.5 bits (73), Expect = 3.4
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 157 FVFKAPIRPDLVNDVHVS----MSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 324
F++K P +PD + HV+ +NA +P+ + E H +A G A + + G
Sbjct: 434 FLYKHPAQPDALQVAHVAPHIMTMRNAGKPFTAANEPTHTVTAGGAGLSLVAAFMAQHNG 493
Query: 325 GGTHRSGQG 351
G S G
Sbjct: 494 GANMESHAG 502
>UniRef50_UPI0000EBD2B3 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 152
Score = 33.1 bits (72), Expect = 4.5
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -1
Query: 380 RPPRHMLPNAPCPDLWVPPPRTRGIRATARPVPQDSAL 267
RPP LP A CP W+PP + G+ +P PQ AL
Sbjct: 90 RPPAQALPGA-CPPTWLPPCLSAGLH---QPRPQPPAL 123
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.1 bits (72), Expect = 4.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 374 PRHMLPNAPCPDLWVPPPR 318
PRH+ P AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
>UniRef50_UPI0000DD80EA Cluster: PREDICTED: hypothetical protein; n=3;
Homo/Pan/Gorilla group|Rep: PREDICTED: hypothetical
protein - Homo sapiens
Length = 1559
Score = 32.7 bits (71), Expect = 5.9
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Frame = -3
Query: 531 QLGNLLNNMPSSLNEGRYPGRCHGGGHGSTSLP*VHATVPAPPR---LGRRE---HTSAA 370
Q G L+ P+S + R G G G ++S P A PAP R GRRE T+AA
Sbjct: 1334 QKGCLIKRKPASEGDCRRAGAAQGSGRAASSAP---APAPAPARAELAGRRETPGATAAA 1390
Query: 369 A---HVTECTLP 343
A V +C+ P
Sbjct: 1391 APSPSVAQCSRP 1402
>UniRef50_Q47KQ6 Cluster: Putative uncharacterized protein; n=1;
Thermobifida fusca YX|Rep: Putative uncharacterized
protein - Thermobifida fusca (strain YX)
Length = 168
Score = 32.7 bits (71), Expect = 5.9
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 392 GANI-RPPRHMLPNAPCPDLWVPPPRTRGIRATARPVP 282
GA++ R ML + P P W PPR GI T R +P
Sbjct: 118 GAHLGREASWMLSSGPSPRAWGSPPRFSGIPTTGRSIP 155
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 32.7 bits (71), Expect = 5.9
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1
Query: 496 ARGHIVEKIPELPLVVSD 549
ARGH +E +PELPLV+ D
Sbjct: 2 ARGHRIESVPELPLVIGD 19
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 32.7 bits (71), Expect = 5.9
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 351 CIR*HVPRRTYVRADQAVEALAPSREPTAE 440
C+R HVP +VRAD+ + LAP +P E
Sbjct: 142 CVRQHVPWWPHVRADEDLPPLAPQDQPAPE 171
>UniRef50_UPI0000F2DA02 Cluster: PREDICTED: similar to ZP1; n=1;
Monodelphis domestica|Rep: PREDICTED: similar to ZP1 -
Monodelphis domestica
Length = 649
Score = 32.3 bits (70), Expect = 7.8
Identities = 20/37 (54%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 377 PPRHMLPNAPCPDLWVPPPR-TRGIRATARPVPQDSA 270
PPR LP P P L PPR TR R+T RP P SA
Sbjct: 148 PPRPSLPARPRPPLSAQPPRSTRPPRST-RPPPPPSA 183
>UniRef50_UPI0000F200AE Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 1756
Score = 32.3 bits (70), Expect = 7.8
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = +1
Query: 88 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPD---LVNDVHVSMSKNARQPYCVSKEAG 258
ARP ++ Y + G S PLP AP +P ++D+ + P+ ++ +G
Sbjct: 475 ARPKITSYPQNRRPAGGLSRPLPSPGAAPSKPHHILTISDLEDTRRPRRHSPH--TQNSG 532
Query: 259 HQTSAESWGTGRAVARIPRVRGGGTH 336
++ S G IP R GG+H
Sbjct: 533 TRSHMTSPTLGSPAGPIPS-RAGGSH 557
>UniRef50_Q21YT9 Cluster: Putative uncharacterized protein; n=1;
Rhodoferax ferrireducens T118|Rep: Putative
uncharacterized protein - Rhodoferax ferrireducens
(strain DSM 15236 / ATCC BAA-621 / T118)
Length = 266
Score = 32.3 bits (70), Expect = 7.8
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = -1
Query: 206 TWTSLTRSGLMGALNTNGRG-----SEAPATTSLFSEYTDTKGRATDRLISLYQRS 54
TW ++RSG + AL TN R ++AP+ L S Y T A D L+ L R+
Sbjct: 52 TWLGISRSGRLAAL-TNHRNPAALRADAPSRGELVSAYLQTDASALDYLMELAGRA 106
>UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Rep:
CG17299-PF, isoform F - Drosophila melanogaster (Fruit
fly)
Length = 1400
Score = 32.3 bits (70), Expect = 7.8
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = +1
Query: 154 PFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 333
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 681 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 739
Query: 334 HRSGQGAFGNMCRGGRM 384
+GQGA G GG M
Sbjct: 740 AAAGQGAAGG--AGGLM 754
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,378,926
Number of Sequences: 1657284
Number of extensions: 11450428
Number of successful extensions: 40706
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 38231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40640
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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