Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_D22
         (440 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR450300-1|CAG29296.1|  374|Homo sapiens GA17 protein.                 88   1e-17
BC051292-1|AAH51292.1|  374|Homo sapiens eukaryotic translation ...    88   1e-17
BC019103-1|AAH19103.1|  374|Homo sapiens PCI domain containing 1...    88   1e-17
AY769947-1|AAX12524.1|  374|Homo sapiens fetal lung protein B5 p...    88   1e-17
AK222564-1|BAD96284.1|  374|Homo sapiens dendritic cell protein ...    88   1e-17
AF064603-1|AAC17108.1|  374|Homo sapiens GA17 protein protein.         88   1e-17
DQ185042-1|ABD14422.1|  136|Homo sapiens dendritic cell protein ...    87   2e-17

>CR450300-1|CAG29296.1|  374|Homo sapiens GA17 protein.
          Length = 374

 Score = 88.2 bits (209), Expect = 1e-17
 Identities = 45/94 (47%), Positives = 64/94 (68%)
 Frame = +2

Query: 137 MQGPAVFMDISLEDQALELRKYFKGLGAEISEEKSPKGIEDDLHKIVGVCDACFKEANES 316
           M  PA F+DIS EDQA ELR Y K  GAEISEE S  G+  DL +I+  CD C KE ++ 
Sbjct: 1   MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDK 58

Query: 317 DIEAILNSIVSIMVSIPLERGENLILAFSERLTK 418
           D+E+++NS+VS+++ +  ++ E LI +  E+L K
Sbjct: 59  DVESVMNSVVSLLLILEPDKQEALIESLCEKLVK 92


>BC051292-1|AAH51292.1|  374|Homo sapiens eukaryotic translation
           initiation factor 3, subunit M protein.
          Length = 374

 Score = 88.2 bits (209), Expect = 1e-17
 Identities = 45/94 (47%), Positives = 64/94 (68%)
 Frame = +2

Query: 137 MQGPAVFMDISLEDQALELRKYFKGLGAEISEEKSPKGIEDDLHKIVGVCDACFKEANES 316
           M  PA F+DIS EDQA ELR Y K  GAEISEE S  G+  DL +I+  CD C KE ++ 
Sbjct: 1   MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDK 58

Query: 317 DIEAILNSIVSIMVSIPLERGENLILAFSERLTK 418
           D+E+++NS+VS+++ +  ++ E LI +  E+L K
Sbjct: 59  DVESVMNSVVSLLLILEPDKQEALIESLCEKLVK 92


>BC019103-1|AAH19103.1|  374|Homo sapiens PCI domain containing 1
           (herpesvirus entry mediator) protein.
          Length = 374

 Score = 88.2 bits (209), Expect = 1e-17
 Identities = 45/94 (47%), Positives = 64/94 (68%)
 Frame = +2

Query: 137 MQGPAVFMDISLEDQALELRKYFKGLGAEISEEKSPKGIEDDLHKIVGVCDACFKEANES 316
           M  PA F+DIS EDQA ELR Y K  GAEISEE S  G+  DL +I+  CD C KE ++ 
Sbjct: 1   MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDK 58

Query: 317 DIEAILNSIVSIMVSIPLERGENLILAFSERLTK 418
           D+E+++NS+VS+++ +  ++ E LI +  E+L K
Sbjct: 59  DVESVMNSVVSLLLILEPDKQEALIESLCEKLVK 92


>AY769947-1|AAX12524.1|  374|Homo sapiens fetal lung protein B5
           protein.
          Length = 374

 Score = 88.2 bits (209), Expect = 1e-17
 Identities = 45/94 (47%), Positives = 64/94 (68%)
 Frame = +2

Query: 137 MQGPAVFMDISLEDQALELRKYFKGLGAEISEEKSPKGIEDDLHKIVGVCDACFKEANES 316
           M  PA F+DIS EDQA ELR Y K  GAEISEE S  G+  DL +I+  CD C KE ++ 
Sbjct: 1   MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDK 58

Query: 317 DIEAILNSIVSIMVSIPLERGENLILAFSERLTK 418
           D+E+++NS+VS+++ +  ++ E LI +  E+L K
Sbjct: 59  DVESVMNSVVSLLLILEPDKQEALIESLCEKLVK 92


>AK222564-1|BAD96284.1|  374|Homo sapiens dendritic cell protein
           variant protein.
          Length = 374

 Score = 88.2 bits (209), Expect = 1e-17
 Identities = 45/94 (47%), Positives = 64/94 (68%)
 Frame = +2

Query: 137 MQGPAVFMDISLEDQALELRKYFKGLGAEISEEKSPKGIEDDLHKIVGVCDACFKEANES 316
           M  PA F+DIS EDQA ELR Y K  GAEISEE S  G+  DL +I+  CD C KE ++ 
Sbjct: 1   MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDK 58

Query: 317 DIEAILNSIVSIMVSIPLERGENLILAFSERLTK 418
           D+E+++NS+VS+++ +  ++ E LI +  E+L K
Sbjct: 59  DVESVMNSVVSLLLILEPDKQEALIESLCEKLVK 92


>AF064603-1|AAC17108.1|  374|Homo sapiens GA17 protein protein.
          Length = 374

 Score = 87.8 bits (208), Expect = 1e-17
 Identities = 45/94 (47%), Positives = 64/94 (68%)
 Frame = +2

Query: 137 MQGPAVFMDISLEDQALELRKYFKGLGAEISEEKSPKGIEDDLHKIVGVCDACFKEANES 316
           M  PA F+DIS EDQA ELR Y K  GAEISEE S  G+  DL +I+  CD C KE ++ 
Sbjct: 1   MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDK 58

Query: 317 DIEAILNSIVSIMVSIPLERGENLILAFSERLTK 418
           D+E+++NS+VS+++ +  ++ E LI +  E+L K
Sbjct: 59  DVESVVNSVVSLLLILEPDKQEALIESLCEKLVK 92


>DQ185042-1|ABD14422.1|  136|Homo sapiens dendritic cell protein
           GA17 protein.
          Length = 136

 Score = 87.4 bits (207), Expect = 2e-17
 Identities = 42/88 (47%), Positives = 61/88 (69%)
 Frame = +2

Query: 155 FMDISLEDQALELRKYFKGLGAEISEEKSPKGIEDDLHKIVGVCDACFKEANESDIEAIL 334
           F+DIS EDQA ELR Y K  GAEISEE S  G+  DL +I+  CD C KE ++ D+E+++
Sbjct: 3   FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDKDVESVM 61

Query: 335 NSIVSIMVSIPLERGENLILAFSERLTK 418
           NS+VS+++ +  ++ E LI +  E+L K
Sbjct: 62  NSVVSLLLILEPDKQEALIESLCEKLVK 89


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,434,210
Number of Sequences: 237096
Number of extensions: 1177489
Number of successful extensions: 1985
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1978
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)