Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_D19
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   0.91 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.8  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   4.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.4  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -2

Query: 218 FTSSVILTSSIFKTTTS 168
           F S +I++ SIF TTTS
Sbjct: 232 FYSKIIISGSIFMTTTS 248


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 401 ITILGVKLMVITKNIWNFLKVNTVNYSNMLTR 496
           + +L  K  V+ + I    K+N  +Y N L++
Sbjct: 188 VVVLKQKFCVVNQYIKQVCKLNNGHYKNFLSQ 219


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 508 FTASAMDMVSFDFLVNLKVPFIKIG 582
           F A    + SFD L ++ V FIK G
Sbjct: 110 FLARGTLIKSFDMLSHVDVSFIKAG 134


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 401 ITILGVKLMVITKNIWNFLKVNTVNYSNMLTR 496
           + +L  K  V+ + I    K+N  +Y N L++
Sbjct: 13  VVVLKQKFCVVNQYIKQVCKLNNGHYKNFLSQ 44


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 508 FTASAMDMVSFDFLVNLKVPFIKIG 582
           F A    + SFD L ++ V FIK G
Sbjct: 110 FLARGTLIKSFDMLSHVDVSFIKAG 134


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 532 VSFDFLVNLKVPFIKIG 582
           VSF F +NL VP +  G
Sbjct: 160 VSFAFPINLSVPVLLSG 176


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 532 VSFDFLVNLKVPFIKIG 582
           VSF F +NL VP +  G
Sbjct: 393 VSFAFPINLSVPVLLSG 409



 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 478  FKYAHEIGILFTASAMDMVSFDFLV 552
            F+  +EIG+  T   ++ + F FL+
Sbjct: 1265 FEDKNEIGVYITYLQLEPIGFVFLI 1289


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 532 VSFDFLVNLKVPFIKIG 582
           VSF F +NL VP +  G
Sbjct: 393 VSFAFPINLSVPVLLSG 409



 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 478  FKYAHEIGILFTASAMDMVSFDFLV 552
            F+  +EIG+  T   ++ + F FL+
Sbjct: 1265 FEDKNEIGVYITYLQLEPIGFVFLI 1289


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,506
Number of Sequences: 336
Number of extensions: 3474
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)