Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_D19
         (627 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           26   1.1  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           24   4.5  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           24   4.5  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           24   4.5  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   4.5  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   7.9  

>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 227 PPTFTSSVILTSSIFKTTTSVP*KQTNENRVP 132
           PPT T++ + T S   TTT  P   T  + +P
Sbjct: 180 PPTTTTTTVWTDSTATTTTHAPTTTTTWSDLP 211


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 227 PPTFTSSVILTSSIFKTTTSVP*KQTNENRVP 132
           PPT T++ + T     TTT  P   T  + +P
Sbjct: 180 PPTTTTTTVWTDPTATTTTPAPTTTTTWSDLP 211


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 227 PPTFTSSVILTSSIFKTTTSVP*KQTNENRVP 132
           PPT T++ + T     TTT  P   T  + +P
Sbjct: 180 PPTTTTTTVWTDPTATTTTPAPTTTTTWSDLP 211


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 227 PPTFTSSVILTSSIFKTTTSVP*KQTNENRVP 132
           PPT T++ + T     TTT  P   T  + +P
Sbjct: 180 PPTTTTTTVWTDPTATTTTHAPTTTTTWSDLP 211


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 227 PPTFTSSVILTSSIFKTTTSVP*KQTNENRVP 132
           PPT T++ + T     TTT  P   T  + +P
Sbjct: 180 PPTTTTTTVWTDPTATTTTHAPTTTTTWSDLP 211


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 466 YRELFKYAHEIGILFTASAMDMVSFD 543
           +R+  + AH  G L  ASA   VS+D
Sbjct: 800 HRKSVQRAHRPGALRVASAFQTVSYD 825


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,378
Number of Sequences: 2352
Number of extensions: 13425
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)