Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_D19
         (627 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000008-1|AAH00008.1|  359|Homo sapiens N-acetylneuraminic acid...   182   7e-46
AL137073-4|CAI13886.1|  359|Homo sapiens N-acetylneuraminic acid...   182   7e-46
AF257466-1|AAF75261.1|  359|Homo sapiens N-acetylneuraminic acid...   182   7e-46
BC019315-1|AAH19315.1|  359|Homo sapiens N-acetylneuraminic acid...   181   2e-45
AK001659-1|BAA91818.1|  359|Homo sapiens protein ( Homo sapiens ...   181   2e-45
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.            30   7.7  

>BC000008-1|AAH00008.1|  359|Homo sapiens N-acetylneuraminic acid
           synthase (sialic acid synthase) protein.
          Length = 359

 Score =  182 bits (444), Expect = 7e-46
 Identities = 82/145 (56%), Positives = 108/145 (74%)
 Frame = +1

Query: 190 LEVKITEDVKVGGNNPCFIIAEVG*NHQGDIGIAKQLIKAAKDAGASCVKFQKTCLKEKF 369
           LE+++     VGG +PCFIIAE+G NHQGD+ +AK++I+ AK+ GA C KFQK+ L+ KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 370 TKKYLERSYDNHNSWGKTYGDHKKHLEFSESQYRELFKYAHEIGILFTASAMDMVSFDFL 549
            +K LER Y + +SWGKTYG+HK+HLEFS  QYREL +YA E+GI FTAS MD ++ +FL
Sbjct: 63  NRKALERPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 550 VNLKVPFIKIGSGDSNKLLVLKYAA 624
             L VPF K+GSGD+N    L+  A
Sbjct: 123 HELNVPFFKVGSGDTNNFPYLEKTA 147


>AL137073-4|CAI13886.1|  359|Homo sapiens N-acetylneuraminic acid
           synthase (sialic acid synthase) protein.
          Length = 359

 Score =  182 bits (444), Expect = 7e-46
 Identities = 82/145 (56%), Positives = 108/145 (74%)
 Frame = +1

Query: 190 LEVKITEDVKVGGNNPCFIIAEVG*NHQGDIGIAKQLIKAAKDAGASCVKFQKTCLKEKF 369
           LE+++     VGG +PCFIIAE+G NHQGD+ +AK++I+ AK+ GA C KFQK+ L+ KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 370 TKKYLERSYDNHNSWGKTYGDHKKHLEFSESQYRELFKYAHEIGILFTASAMDMVSFDFL 549
            +K LER Y + +SWGKTYG+HK+HLEFS  QYREL +YA E+GI FTAS MD ++ +FL
Sbjct: 63  NRKALERPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 550 VNLKVPFIKIGSGDSNKLLVLKYAA 624
             L VPF K+GSGD+N    L+  A
Sbjct: 123 HELNVPFFKVGSGDTNNFPYLEKTA 147


>AF257466-1|AAF75261.1|  359|Homo sapiens N-acetylneuraminic acid
           phosphate synthase protein.
          Length = 359

 Score =  182 bits (444), Expect = 7e-46
 Identities = 82/145 (56%), Positives = 108/145 (74%)
 Frame = +1

Query: 190 LEVKITEDVKVGGNNPCFIIAEVG*NHQGDIGIAKQLIKAAKDAGASCVKFQKTCLKEKF 369
           LE+++     VGG +PCFIIAE+G NHQGD+ +AK++I+ AK+ GA C KFQK+ L+ KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 370 TKKYLERSYDNHNSWGKTYGDHKKHLEFSESQYRELFKYAHEIGILFTASAMDMVSFDFL 549
            +K LER Y + +SWGKTYG+HK+HLEFS  QYREL +YA E+GI FTAS MD ++ +FL
Sbjct: 63  NRKALERPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 550 VNLKVPFIKIGSGDSNKLLVLKYAA 624
             L VPF K+GSGD+N    L+  A
Sbjct: 123 HELNVPFFKVGSGDTNNFPYLEKTA 147


>BC019315-1|AAH19315.1|  359|Homo sapiens N-acetylneuraminic acid
           synthase (sialic acid synthase) protein.
          Length = 359

 Score =  181 bits (441), Expect = 2e-45
 Identities = 81/145 (55%), Positives = 108/145 (74%)
 Frame = +1

Query: 190 LEVKITEDVKVGGNNPCFIIAEVG*NHQGDIGIAKQLIKAAKDAGASCVKFQKTCLKEKF 369
           LE+++     VGG +PCFIIAE+G NHQGD+ +AK++I+ AK+ GA C KFQK+ L+ KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 370 TKKYLERSYDNHNSWGKTYGDHKKHLEFSESQYRELFKYAHEIGILFTASAMDMVSFDFL 549
            +K L+R Y + +SWGKTYG+HK+HLEFS  QYREL +YA E+GI FTAS MD ++ +FL
Sbjct: 63  NRKALDRPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 550 VNLKVPFIKIGSGDSNKLLVLKYAA 624
             L VPF K+GSGD+N    L+  A
Sbjct: 123 HELNVPFFKVGSGDTNNFPYLEKTA 147


>AK001659-1|BAA91818.1|  359|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10797 fis, clone NT2RP4000657, weakly similar to
           SPORE COAT POLYSACCHARIDE BIOSYNTHESIS PROTEIN SPSE. ).
          Length = 359

 Score =  181 bits (441), Expect = 2e-45
 Identities = 81/145 (55%), Positives = 108/145 (74%)
 Frame = +1

Query: 190 LEVKITEDVKVGGNNPCFIIAEVG*NHQGDIGIAKQLIKAAKDAGASCVKFQKTCLKEKF 369
           LE+++     VGG +PCFIIAE+G NHQGD+ +AK++I+ AK+ GA C KFQK+ L+ KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 370 TKKYLERSYDNHNSWGKTYGDHKKHLEFSESQYRELFKYAHEIGILFTASAMDMVSFDFL 549
            +K L+R Y + +SWGKTYG+HK+HLEFS  QYREL +YA E+GI FTAS MD ++ +FL
Sbjct: 63  NRKALDRPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 550 VNLKVPFIKIGSGDSNKLLVLKYAA 624
             L VPF K+GSGD+N    L+  A
Sbjct: 123 HELNVPFFKVGSGDTNNFPYLEKTA 147


>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
          Length = 3570

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
 Frame = -2

Query: 344  WNLT-QLAPASLAAFISCFAIPISP*WFHPTSAIIKHGLLPPTFTSSVILTSSIFKTTTS 168
            W LT Q   A+  A     AIP S     P   ++      PT TSS   +SS  +T T+
Sbjct: 1638 WILTEQTTAATTTATTGSTAIPSSTPGTAPPPKVLTSQATTPTATSSKATSSSSPRTATT 1697

Query: 167  VP------*KQTNENRVPVQAGSLGNKLSLRN 90
            +P       K T  +  P+ + +LG   + +N
Sbjct: 1698 LPVLTSTATKSTATSFTPIPSSTLGTTGTSQN 1729


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,960,699
Number of Sequences: 237096
Number of extensions: 1856229
Number of successful extensions: 7129
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7129
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)