Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_D19
         (627 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   9.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   9.8  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   9.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   9.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   9.8  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   9.8  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 180 NHNERSIKTNKRKP 139
           NHNERS   +  KP
Sbjct: 259 NHNERSTPRSHAKP 272


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 180 NHNERSIKTNKRKP 139
           NHNERS   +  KP
Sbjct: 259 NHNERSTPRSHAKP 272


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 314 LAAFISCFAIPI 279
           + AFI+CF +P+
Sbjct: 317 IGAFITCFTMPL 328


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 180 NHNERSIKTNKRKP 139
           NHNERS   +  KP
Sbjct: 259 NHNERSTPRSHAKP 272


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 221 TFTSSVILTSSIFKTTTSVP*KQTNENRVPVQ 126
           T T+SVI  S      TS+P   T+ N + V+
Sbjct: 841 TPTTSVISMSGTTVPITSLPASSTSINSITVE 872


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
 Frame = -2

Query: 371 VNFSLRQVFWNLTQLAPASLAAFISCFAIPIS---P*WFHPTSAII 243
           +NFS   V  NLT+L P +     +C  +        W +P S  I
Sbjct: 511 MNFSKNPVTVNLTKLHPPADLVVYACNVVGSGLSHGNWIYPASMTI 556


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,220
Number of Sequences: 438
Number of extensions: 3904
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)