Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_D18
(495 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 186 2e-46
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 150 2e-35
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 137 1e-31
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 128 7e-29
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 119 3e-26
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 110 1e-23
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 105 4e-22
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 99 6e-20
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 99 6e-20
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 95 6e-19
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 94 1e-18
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 81 2e-14
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 80 3e-14
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 79 4e-14
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 74 2e-12
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 73 4e-12
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 72 6e-12
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 72 8e-12
UniRef50_Q0IQ32 Cluster: Os12g0150000 protein; n=1; Oryza sativa... 68 1e-10
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 65 7e-10
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 63 3e-09
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 60 3e-08
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 55 1e-06
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 55 1e-06
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 53 3e-06
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 46 4e-04
UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environment... 36 0.010
UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S riboso... 41 0.013
UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6; Euryar... 41 0.018
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 38 0.16
UniRef50_A5E7T0 Cluster: Predicted protein; n=1; Lodderomyces el... 34 2.0
UniRef50_A0DGZ8 Cluster: Chromosome undetermined scaffold_5, who... 32 6.1
UniRef50_Q0IPB6 Cluster: Os12g0226300 protein; n=3; Oryza sativa... 32 8.1
UniRef50_Q4DZ60 Cluster: Putative uncharacterized protein; n=2; ... 32 8.1
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 186 bits (454), Expect = 2e-46
Identities = 89/137 (64%), Positives = 107/137 (78%)
Frame = +3
Query: 33 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRG 212
MK+N VTS R KNRKRHF+APSHIRR +MS+PLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 213 HXXXXXXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRKTILD 392
H +V+YIER+QREKANG +V+VGIHPSK VI +LK++KDRK IL+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 393 RRASGRLAALGKDKGKY 443
R+A R +GK+KGKY
Sbjct: 121 RKAKSR--QVGKEKGKY 135
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 150 bits (363), Expect = 2e-35
Identities = 76/137 (55%), Positives = 97/137 (70%)
Frame = +3
Query: 33 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRG 212
MK+N VTS R K HF+APSHI R +MS+PLSKELRQK+NV+SMP +KDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSMKHKWHFNAPSHILRKIMSSPLSKELRQKYNVQSMPTQKDDEVQVVRG 60
Query: 213 HXXXXXXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRKTILD 392
H +V+YI++++REKANG +V VGIHPSK VI +LK+ +DRK IL+
Sbjct: 61 HYEGQQIGKVVQVYRKKYVIYIKQVEREKANGTTVRVGIHPSKVVITRLKL-EDRKKILE 119
Query: 393 RRASGRLAALGKDKGKY 443
R+ +GK+KGKY
Sbjct: 120 RK-------VGKEKGKY 129
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 137 bits (331), Expect = 1e-31
Identities = 62/124 (50%), Positives = 89/124 (71%)
Frame = +3
Query: 30 RMKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVR 209
+MK+NK ++S+RRK RK HF+AP+ +RR +MS+ LSKELR K+ +++P+RKDDEV + R
Sbjct: 29 KMKFNKQISSARRKMRKAHFTAPAGLRRKIMSSKLSKELRLKYKTRALPVRKDDEVLICR 88
Query: 210 GHXXXXXXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRKTIL 389
GH F +Y+ER+ REKANG S ++GIHPS ++ KLK++K+RK IL
Sbjct: 89 GH-NHGREGKVVKINRKRFKIYVERVTREKANGESTFIGIHPSNVILTKLKIDKNRKKIL 147
Query: 390 DRRA 401
DR+A
Sbjct: 148 DRKA 151
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 128 bits (309), Expect = 7e-29
Identities = 66/129 (51%), Positives = 85/129 (65%)
Frame = +3
Query: 42 NKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRGHXX 221
N + SSRRK+R HF+APS RRV++SAPLS ELR K+NV+SMPIRKDDEV VVRG
Sbjct: 5 NSSLASSRRKSRAAHFNAPSSERRVILSAPLSSELRAKYNVRSMPIRKDDEVMVVRG-SN 63
Query: 222 XXXXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRKTILDRRA 401
+ +++ERI R+K+NG SV + +HPS VI KL ++KDR+ IL+R
Sbjct: 64 KGREGKVTSVYRLKWAIHVERISRDKSNGQSVPIPLHPSNVVIKKLHLDKDREAILERVG 123
Query: 402 SGRLAALGK 428
GR A K
Sbjct: 124 KGREAVKAK 132
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 119 bits (287), Expect = 3e-26
Identities = 60/121 (49%), Positives = 83/121 (68%)
Frame = +3
Query: 51 VTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRGHXXXXX 230
V+S RRK RK +F+APS RRVL+SAPLSKELR ++ +K++PIR+DDEV VVRG
Sbjct: 8 VSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRG-SKKGQ 66
Query: 231 XXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRKTILDRRASGR 410
F V ++++ +EK NGASV + +HPSK VI KL ++KDRK ++ R+ G+
Sbjct: 67 EGKISSVYRLKFAVQVDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQRK-GGK 125
Query: 411 L 413
L
Sbjct: 126 L 126
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 110 bits (265), Expect = 1e-23
Identities = 57/132 (43%), Positives = 83/132 (62%)
Frame = +3
Query: 33 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRG 212
MK + V+S RRK R+ APS++R LMSA LSK+LR+K+NV+++P+RKDDEV VVRG
Sbjct: 1 MKTHVEVSSQRRKGRRAQLGAPSNLRYKLMSAHLSKDLRKKYNVRALPVRKDDEVTVVRG 60
Query: 213 HXXXXXXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRKTILD 392
+ + IE++ R KANG + I S+C+I K +N+DRK +L
Sbjct: 61 -THKGTKGKVSSVYRKRWTIQIEKLTRTKANGMPYQIPIRASQCIITKPYLNEDRKQLLA 119
Query: 393 RRASGRLAALGK 428
R+AS +++ GK
Sbjct: 120 RKASAKVSTKGK 131
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 105 bits (253), Expect = 4e-22
Identities = 54/126 (42%), Positives = 81/126 (64%)
Frame = +3
Query: 33 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRG 212
MK+N V+S+ K RK ++AP+ R +LMSA LSKELR+K+NV ++PI KDDEV++++G
Sbjct: 1 MKFNCKVSSNPSKARKALYTAPASQRAILMSARLSKELREKYNVIAIPIHKDDEVKIIKG 60
Query: 213 HXXXXXXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRKTILD 392
H +V+ I+++ + KANG +V V I PS +I KL +NKDR+ L
Sbjct: 61 H--QKVAGKVTAVRRSKYVINIDKLTKTKANGQTVPVAIRPSNVIITKLFLNKDREAYLA 118
Query: 393 RRASGR 410
++A R
Sbjct: 119 KKAESR 124
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 98.7 bits (235), Expect = 6e-20
Identities = 52/102 (50%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Frame = +3
Query: 144 LRQKFNVKSMPIRKDDEVQVVR--GHXXXXXXXXXXXXXXXXFVVYIERIQREKANGASV 317
L NV+SMP RKD+EVQVVR GH +V+YIE +Q+EKANG +V
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEKANGTTV 77
Query: 318 YVGIHPSKCVIVKLKMNKDRKTILDRRASGRLAALGKDKGKY 443
+VGIHPSK VI +LK++KDRK I +++A A GK+KGKY
Sbjct: 78 HVGIHPSKAVITRLKLDKDRKKIPEQKAKSHQA--GKEKGKY 117
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 98.7 bits (235), Expect = 6e-20
Identities = 56/114 (49%), Positives = 74/114 (64%)
Frame = +3
Query: 102 HIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRGHXXXXXXXXXXXXXXXXFVVYIE 281
H+RR L AP ++++ + P+RKDDEVQVVRG +V+++E
Sbjct: 40 HVRRALHRAP--PQVQRPLH----PVRKDDEVQVVRGSYKGREGKVVQVYRRR-WVIHVE 92
Query: 282 RIQREKANGASVYVGIHPSKCVIVKLKMNKDRKTILDRRASGRLAALGKDKGKY 443
RI REK NG++V VGIHPSK V+ KLK++KDRK ILDR+ASGR A K KGK+
Sbjct: 93 RITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASGR--AADKAKGKF 144
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 95.5 bits (227), Expect = 6e-19
Identities = 52/137 (37%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Frame = +3
Query: 33 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRG 212
+K N ++S +K RK F+A + +SA L+KE + VK +PIR+DDEV + G
Sbjct: 2 VKTNPFLSSQAKKTRKAFFNATKDDKHRQLSAKLNKEQAETHGVKQLPIRRDDEVSINSG 61
Query: 213 HXXXXXXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRKTILD 392
+V ++ REK NG +V+V +HPS C+I KLKM+K RK +++
Sbjct: 62 KFAGREGKVIAVKLSENRIV-VDSFTREKLNGQTVHVSVHPSNCLITKLKMDKQRKELIE 120
Query: 393 RRASGR---LAALGKDK 434
RR +GR LA LG +K
Sbjct: 121 RRRAGREKILAKLGHNK 137
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 94.3 bits (224), Expect = 1e-18
Identities = 46/60 (76%), Positives = 51/60 (85%)
Frame = +3
Query: 33 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRG 212
MK N VTSSRRK RK HF+APS +RRVLMSA LS ELR K+NV+S+PIRKDDEVQVVRG
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRG 60
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 80.6 bits (190), Expect = 2e-14
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Frame = +3
Query: 33 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRG 212
M++ K +S RK RK F+AP H R+ LMSA L ELR+KFN +S+P+R+ D V+++RG
Sbjct: 1 MRWTK--SSQPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRG 58
Query: 213 HXXXXXXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKD-RKTIL 389
+Y+E E+ANG VY IHPS +I++ ++ R+ I+
Sbjct: 59 -DFKGHEGEVVEVDLKRLRIYVEGATIERANGEKVYYPIHPSNVMIIEPNLDDPMRRKII 117
Query: 390 DR 395
+R
Sbjct: 118 ER 119
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 79.8 bits (188), Expect = 3e-14
Identities = 44/96 (45%), Positives = 56/96 (58%)
Frame = +3
Query: 21 RNDRMKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQ 200
R MKY+ VTSSRRK RK HF+APS RR LMSA LS EL+ + ++PIR +DEV+
Sbjct: 16 RRHAMKYSTAVTSSRRKTRKAHFTAPSSERRKLMSAALSAELKAQHGANAVPIRVNDEVR 75
Query: 201 VVRGHXXXXXXXXXXXXXXXXFVVYIERIQREKANG 308
V RG +V++I I R+K NG
Sbjct: 76 VTRG-SFKNREGKVVQVYRKKWVIHIANITRDKVNG 110
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 79.4 bits (187), Expect = 4e-14
Identities = 51/137 (37%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Frame = +3
Query: 33 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRG 212
MK N VT+SRRK RK +F+A + R +MS+ LSKELR + +K+MPIR+ D V++ G
Sbjct: 1 MKLNSAVTASRRKCRKAYFTANAETRAKMMSSRLSKELRAEHKIKTMPIRRGDIVEIFTG 60
Query: 213 HXXXXXXXXXXXXXXXXFVVYIERIQREKAN--GASVYVGIHPSKCVIVKLKMNKDRKTI 386
+ + +E I ++ N V IHPS C+I +L MN R
Sbjct: 61 --GHKGTGKVVEVRRRDYKICVEGINQKARNPEAKPVPYPIHPSNCIIKELYMNGSRYRA 118
Query: 387 LDRRA---SGRLAALGK 428
+ RR + RLA +GK
Sbjct: 119 IKRRQERNAERLARIGK 135
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 74.1 bits (174), Expect = 2e-12
Identities = 40/105 (38%), Positives = 60/105 (57%)
Frame = +3
Query: 66 RKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRGHXXXXXXXXXX 245
RK RK F+AP H+RR +MSA LSKEL++K ++P+RK D V+++RG
Sbjct: 10 RKQRKALFNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRG-DFKGLEGEVI 68
Query: 246 XXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRK 380
+ +Y+E ++ +G V IHPS +I+KL +KD K
Sbjct: 69 KVDLKRYRIYVEGANNKRQDGREVPYPIHPSNVMIIKL-YDKDEK 112
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 72.9 bits (171), Expect = 4e-12
Identities = 44/122 (36%), Positives = 62/122 (50%)
Frame = +3
Query: 45 KLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRGHXXX 224
K TSSRRK RK HF+ +R+ SA LS+ELR+++ ++ P+R D V VV+G
Sbjct: 6 KQKTSSRRKQRKAHFACNDGEKRIRSSARLSRELRKEYGFRTFPLRTGDTV-VVKGGKFD 64
Query: 225 XXXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRKTILDRRAS 404
+ VYIE K +G + V I+PSK I K + RK L+R+
Sbjct: 65 GKEGVISKINYRDYKVYIEGCFVTKNDGTNALVPIYPSKLTITKFFLENGRKEQLERKKR 124
Query: 405 GR 410
R
Sbjct: 125 AR 126
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 72.1 bits (169), Expect = 6e-12
Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Frame = +3
Query: 54 TSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRGHXXXXXX 233
+S RK K AP H RR L++APLSK+L+++ ++ +P+R D V ++RG
Sbjct: 7 SSQPRKQHKALTKAPWHARRRLLTAPLSKDLQRQLGIRRIPVRVGDTVLILRG-DFKGTR 65
Query: 234 XXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKL-KMNKDRKTILDRRASGR 410
+Y++ +K +G +VY IHPSK VIV+L + +K R +D+ R
Sbjct: 66 GKVTRVDYKRVRIYVDSASFKKPSGEAVYYPIHPSKVVIVELDQSDKARVAAIDKTRKAR 125
Query: 411 LAALG 425
A G
Sbjct: 126 EAKAG 130
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 71.7 bits (168), Expect = 8e-12
Identities = 41/132 (31%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
Frame = +3
Query: 48 LVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRGHXXXX 227
+++S K RK ++ P+H+R L++A LS++L +++ +K + IRK D V+++RG
Sbjct: 1 MISSKPSKQRKLVYNLPNHLRYKLLTARLSEDLEKQYGIKRISIRKGDSVKLMRGSQVGY 60
Query: 228 XXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKM-NKDRKTILDRRAS 404
V IE + ++KA+G VYV +H SK +I KL +K+R ++R+
Sbjct: 61 EGKVVEVDRKRGRVA-IEGLTKKKADGTPVYVWVHASKVIITKLDTGDKERMDAIERKRK 119
Query: 405 GRLAALGKDKGK 440
R K K
Sbjct: 120 MREEYFSKKSPK 131
>UniRef50_Q0IQ32 Cluster: Os12g0150000 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0150000 protein -
Oryza sativa subsp. japonica (Rice)
Length = 283
Score = 68.1 bits (159), Expect = 1e-10
Identities = 44/125 (35%), Positives = 62/125 (49%)
Frame = -2
Query: 407 ATSSAIQDCFTVFIHL*LHNHTL*RVDTDVHTGSIGFLTLDPFDVDYKLLTVHLYYFAHL 228
A A++D V + L L + L VD DV G + L D DVD+ V L++ L
Sbjct: 73 AARLAVEDGLAVLVELELGDDHLGGVDPDVDGGPVHLLPRDALDVDHPPAAVDLHHLP-L 131
Query: 227 LAFIMSSYNLHFVVFADWHRFHVELLS*LFGEWC*HKYSSDVRRGTEMPLPVFPSGRRHE 48
A + ++LH VV AD V L++ L GE H+ ++D R E+ LP P G RH
Sbjct: 132 AALVAPPHHLHLVVLADGDGADVVLVAELGGEGGGHEDAADGGRRREVRLPALPPGARHA 191
Query: 47 LIVLH 33
+ LH
Sbjct: 192 WVALH 196
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 65.3 bits (152), Expect = 7e-10
Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Frame = +3
Query: 54 TSSRR-KNRKRH-FSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRGHXXXX 227
TSS+ K RKR + AP HIR + APLS EL+QK +K + +RK D V +VRG
Sbjct: 5 TSSKPGKVRKREVYDAPLHIRSKKIVAPLSAELQQKLGIKRIRVRKGDRVLIVRGSFKGH 64
Query: 228 XXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKD-RKTILDRR 398
+++E KA+G V IHPSK V+ +L ++ RK +++R+
Sbjct: 65 EGKVTSVDVKKG-RIHVEGATLRKADGTEVPFPIHPSKVVVTELDLSDPRRKELVERK 121
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 63.3 bits (147), Expect = 3e-09
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = +3
Query: 126 APLSKELRQKFNVKSMPIRKDDEVQVVRGHXXXXXXXXXXXXXXXXFVVYIERIQREKAN 305
APLS EL +++ +K + IRKDD V+V+RG + IE + R+KA+
Sbjct: 8 APLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFEGKVTQVFPESGRIA-IEGLTRKKAD 66
Query: 306 GASVYVGIHPSKCVIVKLKMNKD-RKTILDRRAS 404
G VY+ IH SK I KL N RK I++R+AS
Sbjct: 67 GTPVYIKIHASKVEITKLNTNDPRRKDIINRKAS 100
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 60.1 bits (139), Expect = 3e-08
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +3
Query: 114 VLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRGHXXXXXXXXXXXXXXXXFVVYIERIQR 293
+LMSAPLS LR K+NV+SMPIRKDDEVQVVRG V++++RI
Sbjct: 46 LLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGREGKVVQVYCQKR-VIHVKRISH 104
Query: 294 EK 299
EK
Sbjct: 105 EK 106
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 54.8 bits (126), Expect = 1e-06
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +3
Query: 66 RKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRGH 215
RK RK +AP H RR +M +PLSKELR+K ++++PI+ D V+V RG+
Sbjct: 23 RKQRKYIINAPLHRRRKMMRSPLSKELREKLGIRNVPIKVGDVVRVERGN 72
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 54.8 bits (126), Expect = 1e-06
Identities = 31/112 (27%), Positives = 55/112 (49%)
Frame = +3
Query: 45 KLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRGHXXX 224
++V+ RK RK ++AP HIR+ M A LS+ L +++ +S + D V+++RG
Sbjct: 6 EMVSKQPRKQRKARYTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMRGDFKG 65
Query: 225 XXXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRK 380
+ ++ + K +G V I+PS +I KL+M R+
Sbjct: 66 TEGKVQSVSLMDG-TIAVDGVISTKVDGTEVPRPINPSNVMITKLEMKDGRR 116
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 53.2 bits (122), Expect = 3e-06
Identities = 32/109 (29%), Positives = 54/109 (49%)
Frame = +3
Query: 33 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRG 212
MKY VT SRRKNRKR F ++ LSKE+++ K++ ++K+ E++V RG
Sbjct: 1 MKYKHHVTCSRRKNRKRCFLNLKRKNSNIIKTNLSKEMQKYHKKKTLILKKNYEIKVKRG 60
Query: 213 HXXXXXXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKL 359
++++ I R K +++V + PS I+K+
Sbjct: 61 DFKGKTGKVIQIKPEQQ-KIFVDNIFRNKFEKTNIFVPLKPSNIQIIKI 108
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 46.4 bits (105), Expect = 4e-04
Identities = 32/101 (31%), Positives = 50/101 (49%)
Frame = +3
Query: 57 SSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRGHXXXXXXX 236
+++ +NR+ + A + R + + +PLSKELR K+ +S+ + + D V VVRG
Sbjct: 3 ATKMRNRQI-YQASTRTRSMQVGSPLSKELRAKYGKRSVRVVEGDTVSVVRGEYKDIDGK 61
Query: 237 XXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKL 359
V IE I++EK G V I SK V+ L
Sbjct: 62 VSHVDTESGSVA-IEGIKKEKGKGDKFDVLIRASKVVVTGL 101
>UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environmental
samples|Rep: Ribosomal protein L24 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 145
Score = 35.5 bits (78), Expect(2) = 0.010
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +3
Query: 48 LVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRG 212
+V+ K R+ AP H+RR M + L + +++S+ IR D V+V+RG
Sbjct: 1 MVSKKAGKQRQAQTDAPVHVRRKRMRSRLISDEPDLQSIRSVTIRVGDTVEVLRG 55
Score = 25.4 bits (53), Expect(2) = 0.010
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 270 VYIERIQREKANGASVYVGIHPSKCVIVKL 359
VY++ + ++G + IHPS V+ KL
Sbjct: 95 VYVDGVTMTTSDGKEEALPIHPSNLVVTKL 124
>UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S ribosomal
protein L26-like 1; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L26-like 1 -
Canis familiaris
Length = 165
Score = 41.1 bits (92), Expect = 0.013
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +3
Query: 33 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAP 131
M +N +T NRKRH +APSH+RR +MS+P
Sbjct: 97 MNFNPFLTWGCSTNRKRHVNAPSHVRRNIMSSP 129
Score = 32.3 bits (70), Expect = 6.1
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 133 SPKS*DKSST*NLCQSAKTTKCRLYEDIIKASRWAK 240
+P+S +S+T + C SA+TT R +ED K S+ A+
Sbjct: 130 TPRSCGRSATSSPCPSARTTGSRWFEDTAKVSKLAR 165
>UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 120
Score = 40.7 bits (91), Expect = 0.018
Identities = 25/104 (24%), Positives = 47/104 (45%)
Frame = +3
Query: 69 KNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRGHXXXXXXXXXXX 248
K RK AP H R + A LS +LR+++ +++ + D V+V+RG
Sbjct: 7 KQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEEGEVINV 66
Query: 249 XXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRK 380
V+++E + EK +G V + S + L + +++
Sbjct: 67 DLDKA-VIHVEDVTLEKTDGEEVPRPLDTSNVRVTDLDLEDEKR 109
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 37.5 bits (83), Expect = 0.16
Identities = 23/98 (23%), Positives = 43/98 (43%)
Frame = +3
Query: 66 RKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRGHXXXXXXXXXX 245
+ K + A + + + LSK+L++K+ +S+ + + D V ++RG
Sbjct: 5 KMRNKMIYRASYQTKSKQLGSALSKDLQKKYGKRSVRVNEGDSVTILRGEFKGVDGKVAE 64
Query: 246 XXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKL 359
V IE +++EK G V IH S ++ L
Sbjct: 65 VSTAKSSVA-IEGVKKEKTKGDKFDVFIHTSNLLVTSL 101
>UniRef50_A5E7T0 Cluster: Predicted protein; n=1; Lodderomyces
elongisporus NRRL YB-4239|Rep: Predicted protein -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 219
Score = 33.9 bits (74), Expect = 2.0
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 276 IERIQREKANGASVYVGIHPSKCVIVKLKMNKD 374
I+ I RE+ N SV+ G +PS+ V +K K NKD
Sbjct: 66 IKDIDREEKNNQSVHYGENPSEKVEIKTKQNKD 98
>UniRef50_A0DGZ8 Cluster: Chromosome undetermined scaffold_5, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_5,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 587
Score = 32.3 bits (70), Expect = 6.1
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 318 THWLHWLSHAGSFRCRLQTSYGTPVLLCP-PAGLYNVLVQPAL 193
T+W +W H S CRL +G L P G+Y++ + A+
Sbjct: 453 TYWSYWFQHLYSALCRLTFVFGVACLCLPNMIGIYDIFNRKAM 495
>UniRef50_Q0IPB6 Cluster: Os12g0226300 protein; n=3; Oryza
sativa|Rep: Os12g0226300 protein - Oryza sativa subsp.
japonica (Rice)
Length = 337
Score = 31.9 bits (69), Expect = 8.1
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +2
Query: 179 PQRRRSAGCTRTL*RPAG 232
PQRRRSAGC R L PAG
Sbjct: 164 PQRRRSAGCCRLLSAPAG 181
>UniRef50_Q4DZ60 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 552
Score = 31.9 bits (69), Expect = 8.1
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 2 GTRV*VKKRQNEVQ*AR-DVVQKEKQEEAFQCPFSHPTSTYVSTTLQRVKTKVQREIYAN 178
G R+ KK++ E + AR + +KEK+EE + + + T + +++ + N
Sbjct: 321 GKRMQEKKKKEEEEAARQEREKKEKEEEEEEAKMRKKNAASSAPTFSSIVQSLEKRLNEN 380
Query: 179 PQRRRSAGCTRTL 217
R S CT T+
Sbjct: 381 QHRDTSPDCTSTV 393
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,986,885
Number of Sequences: 1657284
Number of extensions: 9040018
Number of successful extensions: 24246
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 23559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24221
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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