Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_D17
(463 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 80 9e-16
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 77 8e-15
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 77 8e-15
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 75 3e-14
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 70 9e-13
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 67 5e-12
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 66 9e-12
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 65 3e-11
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 65 3e-11
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 62 2e-10
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 61 3e-10
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 60 8e-10
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 60 1e-09
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 60 1e-09
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 59 1e-09
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 59 2e-09
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 59 2e-09
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 59 2e-09
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 58 2e-09
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 58 2e-09
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 58 2e-09
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 58 4e-09
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 58 4e-09
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 58 4e-09
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 58 4e-09
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 58 4e-09
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 57 5e-09
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 57 5e-09
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 57 5e-09
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 56 1e-08
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 55 2e-08
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 55 2e-08
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 55 2e-08
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 54 4e-08
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 54 4e-08
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 49 2e-06
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 46 1e-05
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 46 1e-05
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 46 2e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 45 2e-05
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 44 4e-05
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 44 4e-05
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 44 7e-05
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 43 9e-05
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 42 2e-04
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 36 0.014
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 32 0.17
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 32 0.17
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 31 0.40
Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical pr... 29 1.2
AB201389-1|BAE78829.1| 1113|Caenorhabditis elegans recepotor typ... 29 1.2
AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical ... 28 3.7
AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical ... 28 3.7
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 27 6.5
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 27 6.5
Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z34533-5|CAA84298.1| 781|Caenorhabditis elegans Hypothetical pr... 27 8.6
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 79.8 bits (188), Expect = 9e-16
Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Frame = +3
Query: 171 EEKKVMFHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFT 350
E + F + LD+RILK+I +L W + +QE+ I L LE K+++ RARTGSGKT AF
Sbjct: 85 EPEHKTFADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFL 144
Query: 351 IPVIQKIL-HSKHTSTHQCIKALPLSPSKELCGQ 449
IP++QK++ SK A+ ++P+KEL Q
Sbjct: 145 IPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQ 178
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 76.6 bits (180), Expect = 8e-15
Identities = 40/91 (43%), Positives = 59/91 (64%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
+ ++ LD + KAI + + +PT IQ IP +++GKDV+ +RTGSGKTAAF IP++QK
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQK 85
Query: 369 ILHSKHTSTHQCIKALPLSPSKELCGQTDSV 461
+ T I+AL +SP++EL QT V
Sbjct: 86 LKRRDTTG----IRALMVSPTRELALQTFKV 112
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 76.6 bits (180), Expect = 8e-15
Identities = 40/91 (43%), Positives = 59/91 (64%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
+ ++ LD + KAI + + +PT IQ IP +++GKDV+ +RTGSGKTAAF IP++QK
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQK 85
Query: 369 ILHSKHTSTHQCIKALPLSPSKELCGQTDSV 461
+ T I+AL +SP++EL QT V
Sbjct: 86 LKRRDTTG----IRALMVSPTRELALQTFKV 112
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 74.5 bits (175), Expect = 3e-14
Identities = 37/93 (39%), Positives = 58/93 (62%)
Frame = +3
Query: 183 VMFHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVI 362
V F +M L +ILKA S + +PT IQ+ IP+ L GKD+ A TG+GKTAAF +P++
Sbjct: 148 VSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPIL 207
Query: 363 QKILHSKHTSTHQCIKALPLSPSKELCGQTDSV 461
+++++ ++ C + L L P++EL Q V
Sbjct: 208 ERMIYRPKGAS--CTRVLVLVPTRELAIQVFQV 238
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 69.7 bits (163), Expect = 9e-13
Identities = 38/91 (41%), Positives = 54/91 (59%)
Frame = +3
Query: 177 KKVMFHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIP 356
K+ F E+ + + A +L W +P+ IQ+ A+P L+GKDV+ A TGSGKT AF IP
Sbjct: 42 KEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIP 101
Query: 357 VIQKILHSKHTSTHQCIKALPLSPSKELCGQ 449
V+Q +L H C L L+P++EL Q
Sbjct: 102 VLQSLL--DHPQAFFC---LVLTPTRELAFQ 127
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 67.3 bits (157), Expect = 5e-12
Identities = 38/89 (42%), Positives = 54/89 (60%)
Frame = +3
Query: 195 EMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQKIL 374
E +++ +LKA+ L + T IQ +I LLEGKDVL A+TGSGKT AF +P I+ +L
Sbjct: 72 EGKVNANLLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIE-LL 130
Query: 375 HSKHTSTHQCIKALPLSPSKELCGQTDSV 461
H + H + +SP++EL QT V
Sbjct: 131 HKLNWKQHNGTGVIIVSPTRELSMQTYGV 159
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 66.5 bits (155), Expect = 9e-12
Identities = 36/97 (37%), Positives = 57/97 (58%)
Frame = +3
Query: 171 EEKKVMFHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFT 350
+ K V F + L +L I + W +P+ IQE +I + L G+D+L RA+ G+GKT A+
Sbjct: 39 DTKGVEFEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYC 98
Query: 351 IPVIQKILHSKHTSTHQCIKALPLSPSKELCGQTDSV 461
IPVI+KI + I+A+ + P++EL QT +
Sbjct: 99 IPVIEKI-----QPALKAIQAMVIVPTRELALQTSQI 130
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 64.9 bits (151), Expect = 3e-11
Identities = 33/91 (36%), Positives = 57/91 (62%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F +MEL + +L+ I + +P+ IQ+ AI GKDV+ +A++G+GKTA F++ ++Q+
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 369 ILHSKHTSTHQCIKALPLSPSKELCGQTDSV 461
I H H ++AL ++P++EL Q V
Sbjct: 91 I---DHEDPH--VQALVMAPTRELAQQIQKV 116
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 64.9 bits (151), Expect = 3e-11
Identities = 33/91 (36%), Positives = 57/91 (62%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F +MEL + +L+ I + +P+ IQ+ AI GKDV+ +A++G+GKTA F++ ++Q+
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 369 ILHSKHTSTHQCIKALPLSPSKELCGQTDSV 461
I H H ++AL ++P++EL Q V
Sbjct: 91 I---DHEDPH--VQALVMAPTRELAQQIQKV 116
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 61.7 bits (143), Expect = 2e-10
Identities = 35/91 (38%), Positives = 57/91 (62%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F +M L + +L+ I + +P+ IQ+ AIP +L+ +DV+ +A++G+GKTA F+I V+Q
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQ- 86
Query: 369 ILHSKHTSTHQCIKALPLSPSKELCGQTDSV 461
S T + +AL LSP++EL Q V
Sbjct: 87 ---SLDTQVRE-TQALILSPTRELAVQIQKV 113
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 61.3 bits (142), Expect = 3e-10
Identities = 34/91 (37%), Positives = 57/91 (62%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F +M L + +L+ I + +P+ IQ+ A+P +L+ +DV+ +A++G+GKTA F+I V+Q
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQ- 86
Query: 369 ILHSKHTSTHQCIKALPLSPSKELCGQTDSV 461
S T + +AL LSP++EL Q V
Sbjct: 87 ---SLDTQVRE-TQALILSPTRELAVQIQKV 113
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 60.1 bits (139), Expect = 8e-10
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F + + +L +S+ + +P+ IQ +IP + E ++VL A TGSGKT AF +PVI +
Sbjct: 128 FSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDE 187
Query: 369 ILHSKH-----TSTHQCIKALPLSPSKELCGQT 452
IL K +S + A+ L P++EL QT
Sbjct: 188 ILELKQRADYSSSNSSKLLAVVLEPTRELAAQT 220
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 59.7 bits (138), Expect = 1e-09
Identities = 29/80 (36%), Positives = 48/80 (60%)
Frame = +3
Query: 213 RILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQKILHSKHTS 392
+++ + + + +PT IQ AIP ++ G+DV+ A+TGSGKT AF +P+ + IL
Sbjct: 314 KMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELE 373
Query: 393 THQCIKALPLSPSKELCGQT 452
A+ L+P++EL QT
Sbjct: 374 EGDGPIAVILAPTRELAMQT 393
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 59.7 bits (138), Expect = 1e-09
Identities = 27/59 (45%), Positives = 36/59 (61%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQ 365
F E + + A+S L W PT +Q AIP +L G D L+ A TGSGKT AF++P+ Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 59.3 bits (137), Expect = 1e-09
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
+ E D + +A+ ++ + EPT IQ AIP+ L+ +DV+ A TGSGKTAAF +P++
Sbjct: 303 WEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVW 362
Query: 369 I--LHSKHTSTHQCI--KALPLSPSKELCGQTD 455
I L H+ + A+ ++P++EL Q +
Sbjct: 363 ITSLPKMERQEHRDLGPYAIIMAPTRELAQQIE 395
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 58.8 bits (136), Expect = 2e-09
Identities = 30/91 (32%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F E L + + K ++ + + T IQ+ A+PL+ +G D++ A+TGSGKTAAF +P++ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 369 ILHSKHTST---HQCI-KALPLSPSKELCGQ 449
++ + +T C + + L+P++EL Q
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 58.8 bits (136), Expect = 2e-09
Identities = 30/91 (32%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F E L + + K ++ + + T IQ+ A+PL+ +G D++ A+TGSGKTAAF +P++ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 369 ILHSKHTST---HQCI-KALPLSPSKELCGQ 449
++ + +T C + + L+P++EL Q
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 58.8 bits (136), Expect = 2e-09
Identities = 30/91 (32%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F E L + + K ++ + + T IQ+ A+PL+ +G D++ A+TGSGKTAAF +P++ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 369 ILHSKHTST---HQCI-KALPLSPSKELCGQ 449
++ + +T C + + L+P++EL Q
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 58.4 bits (135), Expect = 2e-09
Identities = 33/87 (37%), Positives = 48/87 (55%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F D +++AI + + +PT IQ AIP L G+DVL A+TGSGKTAA+ P I
Sbjct: 267 FAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVH 326
Query: 369 ILHSKHTSTHQCIKALPLSPSKELCGQ 449
I+ + A+ + P++EL Q
Sbjct: 327 IMDQPDLKAGEGPVAVIVVPTRELAIQ 353
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 58.4 bits (135), Expect = 2e-09
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 11/96 (11%)
Frame = +3
Query: 186 MFHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQ 365
+F ++ L + I + I + PT +Q+ +IP L G+D++ A+TGSGKTAAF +P++
Sbjct: 167 LFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVN 226
Query: 366 KILHSKHTSTHQCI-----------KALPLSPSKEL 440
IL + H+ + AL LSP++EL
Sbjct: 227 AILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTREL 262
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 58.4 bits (135), Expect = 2e-09
Identities = 34/90 (37%), Positives = 51/90 (56%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F + L R L+ + + +PT IQ I L G DV+ A+TGSGKT A IPV++
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 369 ILHSKHTSTHQCIKALPLSPSKELCGQTDS 458
+ +K + + + AL +SP++EL QT S
Sbjct: 138 LWRAKWSPDYG-LGALIISPTRELALQTFS 166
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 57.6 bits (133), Expect = 4e-09
Identities = 28/91 (30%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F + ++ + + + + + T IQ+ +PL+ +GKD+L A+TGSGKTAAF +P++ +
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSR 359
Query: 369 ILHSK---HTSTHQCI-KALPLSPSKELCGQ 449
++ K + + C + + L+P++EL Q
Sbjct: 360 LILEKDLNYGAEGGCYPRCIILTPTRELADQ 390
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 57.6 bits (133), Expect = 4e-09
Identities = 28/91 (30%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F + ++ + + + + + T IQ+ +PL+ +GKD+L A+TGSGKTAAF +P++ +
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSR 359
Query: 369 ILHSK---HTSTHQCI-KALPLSPSKELCGQ 449
++ K + + C + + L+P++EL Q
Sbjct: 360 LILEKDLNYGAEGGCYPRCIILTPTRELADQ 390
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 57.6 bits (133), Expect = 4e-09
Identities = 25/62 (40%), Positives = 43/62 (69%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F+E +++ +++ + +PT +Q+ +IP LL +D++ A+TGSGKTAAF +P+IQ
Sbjct: 141 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 200
Query: 369 IL 374
IL
Sbjct: 201 IL 202
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 57.6 bits (133), Expect = 4e-09
Identities = 25/62 (40%), Positives = 43/62 (69%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F+E +++ +++ + +PT +Q+ +IP LL +D++ A+TGSGKTAAF +P+IQ
Sbjct: 125 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 184
Query: 369 IL 374
IL
Sbjct: 185 IL 186
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 57.6 bits (133), Expect = 4e-09
Identities = 25/62 (40%), Positives = 43/62 (69%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F+E +++ +++ + +PT +Q+ +IP LL +D++ A+TGSGKTAAF +P+IQ
Sbjct: 122 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 181
Query: 369 IL 374
IL
Sbjct: 182 IL 183
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 57.2 bits (132), Expect = 5e-09
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F E L + + K ++ + + T IQ+ +PL+ +G D++ A+TGSGKTAAF +P++ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 369 ILHSKHTST---HQCI-KALPLSPSKELCGQ 449
++ +T C + + L+P++EL Q
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 57.2 bits (132), Expect = 5e-09
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F E L + + K ++ + + T IQ+ +PL+ +G D++ A+TGSGKTAAF +P++ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 369 ILHSKHTST---HQCI-KALPLSPSKELCGQ 449
++ +T C + + L+P++EL Q
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 57.2 bits (132), Expect = 5e-09
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F E L + + K ++ + + T IQ+ +PL+ +G D++ A+TGSGKTAAF +P++ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 369 ILHSKHTST---HQCI-KALPLSPSKELCGQ 449
++ +T C + + L+P++EL Q
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 56.0 bits (129), Expect = 1e-08
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 7/86 (8%)
Frame = +3
Query: 204 LDDRILKAISQLAWPEPTLIQETAIPLLLEGK-DVLMRARTGSGKTAAFTIPVIQKILHS 380
L + +L+AI Q+ + EPT IQ +P + + DVL A TGSGKT AF IP++ ++L S
Sbjct: 162 LPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLES 221
Query: 381 KHTSTH------QCIKALPLSPSKEL 440
S + +AL ++P++EL
Sbjct: 222 SDDSQETESTEVRGPRALIVAPTREL 247
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/71 (36%), Positives = 40/71 (56%)
Frame = +3
Query: 249 EPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQKILHSKHTSTHQCIKALPLSP 428
+PT+IQ + P+ + G+D++ A+TGSGKT AF +P + I H + L L P
Sbjct: 151 KPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLP 210
Query: 429 SKELCGQTDSV 461
++EL Q V
Sbjct: 211 TRELAQQVQEV 221
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 55.6 bits (128), Expect = 2e-08
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Frame = +3
Query: 204 LDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQKILHSK 383
L IL+ + ++ + IQ IP +L+G DVL +A T +GKTAAF +P+I KIL
Sbjct: 388 LHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMD 447
Query: 384 HTSTHQCIK-----ALPLSPSKELCGQ 449
+ ++ + AL L+P++EL Q
Sbjct: 448 EETRNKARQDDGPLALILAPTRELAAQ 474
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 55.2 bits (127), Expect = 2e-08
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLL--EGKDVLMRARTGSGKTAAFTIPVI 362
F E+ L +LKA+ + + PT IQETA+PLLL +++ +A++G+GKTAAF + ++
Sbjct: 211 FRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTML 270
Query: 363 QKILHSKHTSTHQCIKALPLSPSKELCGQTDSV 461
+I C + + L+P+ EL Q V
Sbjct: 271 CRI-----DVNLMCPQCICLAPTLELAKQIGEV 298
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 55.2 bits (127), Expect = 2e-08
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLL--EGKDVLMRARTGSGKTAAFTIPVI 362
F E+ L +LKA+ + + PT IQETA+PLLL +++ +A++G+GKTAAF + ++
Sbjct: 236 FRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTML 295
Query: 363 QKILHSKHTSTHQCIKALPLSPSKELCGQTDSV 461
+I C + + L+P+ EL Q V
Sbjct: 296 CRI-----DVNLMCPQCICLAPTLELAKQIGEV 323
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 55.2 bits (127), Expect = 2e-08
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLL--EGKDVLMRARTGSGKTAAFTIPVI 362
F E+ L +LKA+ + + PT IQETA+PLLL +++ +A++G+GKTAAF + ++
Sbjct: 620 FRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTML 679
Query: 363 QKILHSKHTSTHQCIKALPLSPSKELCGQTDSV 461
+I C + + L+P+ EL Q V
Sbjct: 680 CRI-----DVNLMCPQCICLAPTLELAKQIGEV 707
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 54.4 bits (125), Expect = 4e-08
Identities = 32/87 (36%), Positives = 49/87 (56%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F ++ + I + + + T +Q IP +LEG D+L ARTG+GKT AF IP++QK
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 369 ILHSKHTSTHQCIKALPLSPSKELCGQ 449
+ + I AL L+P++EL Q
Sbjct: 151 LSVDPYG-----IYALILTPTRELAFQ 172
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 54.4 bits (125), Expect = 4e-08
Identities = 32/87 (36%), Positives = 49/87 (56%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F ++ + I + + + T +Q IP +LEG D+L ARTG+GKT AF IP++QK
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 369 ILHSKHTSTHQCIKALPLSPSKELCGQ 449
+ + I AL L+P++EL Q
Sbjct: 151 LSVDPYG-----IYALILTPTRELAFQ 172
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 48.8 bits (111), Expect = 2e-06
Identities = 28/59 (47%), Positives = 38/59 (64%)
Frame = +3
Query: 285 LLEGKDVLMRARTGSGKTAAFTIPVIQKILHSKHTSTHQCIKALPLSPSKELCGQTDSV 461
LL DV++ + TGSGKT AF +P+++ I ++K I AL LSPS+ELC Q SV
Sbjct: 43 LLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQPAD--IGALILSPSRELCSQIVSV 99
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 46.0 bits (104), Expect = 1e-05
Identities = 25/87 (28%), Positives = 54/87 (62%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F + + + L+ + + P+ +Q AIP+ L G+D+L++A++G+GKT F++ ++
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 369 ILHSKHTSTHQCIKALPLSPSKELCGQ 449
L S+ S+H I+ + ++P++E+ Q
Sbjct: 84 -LDSR--SSH--IQKVIVTPTREISVQ 105
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 46.0 bits (104), Expect = 1e-05
Identities = 25/87 (28%), Positives = 54/87 (62%)
Frame = +3
Query: 189 FHEMELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQK 368
F + + + L+ + + P+ +Q AIP+ L G+D+L++A++G+GKT F++ ++
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 369 ILHSKHTSTHQCIKALPLSPSKELCGQ 449
L S+ S+H I+ + ++P++E+ Q
Sbjct: 84 -LDSR--SSH--IQKVIVTPTREISVQ 105
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/58 (36%), Positives = 36/58 (62%)
Frame = +3
Query: 198 MELDDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQKI 371
MEL + +L+ I + +P+ IQ++A+ GKDV ++++ GSGKT I ++Q I
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGI 58
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 45.2 bits (102), Expect = 2e-05
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Frame = +3
Query: 249 EPTLIQETAIPLLLEGK-DVLMRARTGSGKTAAFTIPVIQKILHSKHTSTH------QCI 407
EPT IQ +P + + DVL A TGSGKT AF IP++ ++L S S +
Sbjct: 10 EPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGP 69
Query: 408 KALPLSPSKEL 440
+AL ++P++EL
Sbjct: 70 RALIVAPTREL 80
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 44.4 bits (100), Expect = 4e-05
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +3
Query: 228 ISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQKILHSKH-----TS 392
+ ++ PT IQ + ++ G DV+ A TGSGKT AF IP + K++ T
Sbjct: 751 LKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTD 810
Query: 393 THQCIKALPLSPSKELCGQT 452
+ L ++P++EL QT
Sbjct: 811 EKPSPRLLIVAPTRELVNQT 830
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 44.4 bits (100), Expect = 4e-05
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +3
Query: 228 ISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQKILHSKH-----TS 392
+ ++ PT IQ + ++ G DV+ A TGSGKT AF IP + K++ T
Sbjct: 751 LKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTD 810
Query: 393 THQCIKALPLSPSKELCGQT 452
+ L ++P++EL QT
Sbjct: 811 EKPSPRLLIVAPTRELVNQT 830
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 43.6 bits (98), Expect = 7e-05
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 189 FHEMELDDRILKAIS-QLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQ 365
F EM+ +L+ + Q PT IQ IP+ L G+D++ A TGSGKT F +P++
Sbjct: 191 FLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVM 250
Query: 366 KILHSK 383
L +
Sbjct: 251 FCLEQE 256
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 43.2 bits (97), Expect = 9e-05
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Frame = +3
Query: 216 ILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVI-----QKILHS 380
I+ I + + +P+ IQ PLLL G+D + ++TGSGKT AF +P + Q +
Sbjct: 95 IMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYE 154
Query: 381 KHTSTHQCIK-ALPLSPSKELCGQTD 455
K+ + L LSP++EL Q +
Sbjct: 155 KNDEEQKPSPFVLVLSPTRELAQQIE 180
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/67 (31%), Positives = 40/67 (59%)
Frame = +3
Query: 261 IQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQKILHSKHTSTHQCIKALPLSPSKEL 440
+Q+ +I ++ EG+ +++ A TG GKT AF IP I+ L ++ ++ C ++ SPS +
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSN---CFESTKPSPSILI 75
Query: 441 CGQTDSV 461
T ++
Sbjct: 76 MASTSAL 82
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 41.9 bits (94), Expect = 2e-04
Identities = 21/71 (29%), Positives = 39/71 (54%)
Frame = +3
Query: 207 DDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQKILHSKH 386
D RI+ + + +Q+ +I ++ EG+ +++ A TG GKT AF IP I+ L ++
Sbjct: 101 DQRIVNNLKCVHVTTFNAVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKNRQ 160
Query: 387 TSTHQCIKALP 419
++ + K P
Sbjct: 161 SNCFEYTKPSP 171
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 35.9 bits (79), Expect = 0.014
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +3
Query: 252 PTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQKILHSKHTSTHQCIKALPL 422
P+L E P L +DV + A TGSGKT + +PV+ + SK + Q + +P+
Sbjct: 142 PSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAV-GSKPSKILQAVILVPV 197
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 32.3 bits (70), Expect = 0.17
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +3
Query: 264 QETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQKILHSKHTSTHQCIKALPLSPSKELC 443
QE + L+GK+ ++ A TGSGKT +I++ S+ +S + KAL ++P+ +
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKT-VIAANIIKEHFESR-SSEGKRFKALFMTPNSMIL 354
Query: 444 GQ 449
Q
Sbjct: 355 NQ 356
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 32.3 bits (70), Expect = 0.17
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +3
Query: 264 QETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQKILHSKHTSTHQCIKALPLSPSKELC 443
QE + L+GK+ ++ A TGSGKT +I++ S+ +S + KAL ++P+ +
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKT-VIAANIIKEHFESR-SSEGKRFKALFMTPNSMIL 354
Query: 444 GQ 449
Q
Sbjct: 355 NQ 356
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 31.1 bits (67), Expect = 0.40
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 264 QETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQKILHSKHTSTHQCIKALPLSPSKELC 443
QE + LEGK+ ++ A TGSGKT ++ I + TS + + + L P L
Sbjct: 375 QEELVQPALEGKNCVIVAPTGSGKTEVAIYAALKHI--EERTSQGKPSRVVLLVPKIPLV 432
Query: 444 GQ 449
GQ
Sbjct: 433 GQ 434
>Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical
protein ZK896.8 protein.
Length = 1112
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +3
Query: 207 DDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQKILH 377
D + K +++++ I E + LLL K + + T +G TA + + ++I+H
Sbjct: 155 DRSVYKTLARVSSKNTNSIAEATVALLLHYKWLKVAIATNTGSTAFERVSIFEEIMH 211
>AB201389-1|BAE78829.1| 1113|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1113
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +3
Query: 207 DDRILKAISQLAWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQKILH 377
D + K +++++ I E + LLL K + + T +G TA + + ++I+H
Sbjct: 155 DRSVYKTLARVSSKNTNSIAEATVALLLHYKWLKVAIATNTGSTAFERVSIFEEIMH 211
>AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical
protein H14N18.4b protein.
Length = 603
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -2
Query: 282 MVLLFLGSMLALAMPVGISPSVSDRPA 202
+ +LFL S +ALA+ VGI S D+P+
Sbjct: 19 LAILFLLSTIALAIVVGIKYSEDDKPS 45
>AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical
protein H14N18.4a protein.
Length = 633
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -2
Query: 282 MVLLFLGSMLALAMPVGISPSVSDRPA 202
+ +LFL S +ALA+ VGI S D+P+
Sbjct: 49 LAILFLLSTIALAIVVGIKYSEDDKPS 75
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 364 CITGIVKAAVLPEPVLARMRTSLPSRSNGIAVSWINVGSGHA 239
C+ ++ LPE RT PSR + I W SGH+
Sbjct: 740 CLDKLISTGRLPEAAFLA-RTHAPSRVSSILELWKAKASGHS 780
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -1
Query: 376 CNIFCITGIVKAAVLPEPVLARMRTSLPSRSNGIAVSWINVGSGH 242
C I GI+ A V + R LP +G+A+ N+ SG+
Sbjct: 99 CEAVAIFGIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASGY 143
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -1
Query: 376 CNIFCITGIVKAAVLPEPVLARMRTSLPSRSNGIAVSWINVGSGH 242
C I GI+ A V + R LP +G+A+ N+ SG+
Sbjct: 99 CEAVAIFGIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASGY 143
>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical
protein W08D2.7 protein.
Length = 1026
Score = 26.6 bits (56), Expect = 8.6
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 264 QETAIPLLLEGKDVLMRARTGSGKTAAFTIPVIQKILHSKHTSTHQCIKALPLSPSKEL 440
Q+ AI + + VL+ A T +GKT T + + + + IKAL +EL
Sbjct: 130 QKQAILCIDNNQSVLVSAHTSAGKTVVATYAIAKCLREKQRVIYTSPIKALSNQKYREL 188
>Z34533-5|CAA84298.1| 781|Caenorhabditis elegans Hypothetical
protein B0285.7 protein.
Length = 781
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 303 VLMRARTGSGKTAAFTIPVIQKILHSKHTSTHQCI 407
V+ + G T+P Q I + KHTSTH+ +
Sbjct: 431 VVAPVQAGHSALGVITLPA-QAIAYQKHTSTHETL 464
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,698,058
Number of Sequences: 27780
Number of extensions: 209683
Number of successful extensions: 564
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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