Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_D16
         (498 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9L255 Cluster: Putative serine/threonine protein kinas...    36   0.51 
UniRef50_UPI0000EB2BA3 Cluster: UPI0000EB2BA3 related cluster; n...    35   0.88 
UniRef50_Q5YX19 Cluster: Putative serine/threonine protein kinas...    34   2.0  
UniRef50_Q6BCL1 Cluster: PML-RARA-regulated adapter molecule 1; ...    32   6.2  
UniRef50_A5GCG9 Cluster: Glycosyl transferase, family 39; n=1; G...    32   8.2  

>UniRef50_Q9L255 Cluster: Putative serine/threonine protein kinase;
           n=2; Streptomyces|Rep: Putative serine/threonine protein
           kinase - Streptomyces coelicolor
          Length = 903

 Score = 35.9 bits (79), Expect = 0.51
 Identities = 27/69 (39%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
 Frame = -1

Query: 240 STVFTLQVVVLYT---PRLHSDPGRILQNSPLRIGRRGGWGRACVSGSGILPPIPIGFNX 70
           ST+F  +V V  T   PRL  +  R+    P   GRRGG G A   G+G  P +P G   
Sbjct: 480 STLFGPEVRVTDTELFPRLDGEVSRLGARVPPARGRRGGSGAALPGGAGAAPALPGG--- 536

Query: 69  RGVLVGISG 43
            G  VG  G
Sbjct: 537 SGPAVGAPG 545


>UniRef50_UPI0000EB2BA3 Cluster: UPI0000EB2BA3 related cluster; n=1;
           Canis lupus familiaris|Rep: UPI0000EB2BA3 UniRef100
           entry - Canis familiaris
          Length = 264

 Score = 35.1 bits (77), Expect = 0.88
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = +2

Query: 32  GVKRPEIPTKTPR*LNPMGMGGRIPLPDTQALPHPPLRPIL 154
           G  +P  P + P  L P   G   PLP  +A P PP RP L
Sbjct: 108 GTHQPTGPNEKPMELGPPPPGAPFPLPPKEATPCPPARPHL 148


>UniRef50_Q5YX19 Cluster: Putative serine/threonine protein kinase;
           n=1; Nocardia farcinica|Rep: Putative serine/threonine
           protein kinase - Nocardia farcinica
          Length = 545

 Score = 33.9 bits (74), Expect = 2.0
 Identities = 16/48 (33%), Positives = 18/48 (37%)
 Frame = +2

Query: 5   RPHQCGTHPGVKRPEIPTKTPR*LNPMGMGGRIPLPDTQALPHPPLRP 148
           RPHQ   H     P  P      + P+  G     PD     HPP RP
Sbjct: 298 RPHQPSPHRAGPAPHAPAAARATVRPLPDGSSAAAPDNHRTAHPPGRP 345


>UniRef50_Q6BCL1 Cluster: PML-RARA-regulated adapter molecule 1;
           n=6; Amniota|Rep: PML-RARA-regulated adapter molecule 1
           - Mus musculus (Mouse)
          Length = 675

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = +2

Query: 14  QCGTHPGVKRPEIPTKTPR*LNPMGMGGRIPLPDTQALPHPPLRPIL 154
           QC   PG+  P IP              R PLP   +L HPP +P L
Sbjct: 421 QCPLSPGLIVPGIPRWRSEDFQVQRPPRRRPLPSASSLGHPPAKPAL 467


>UniRef50_A5GCG9 Cluster: Glycosyl transferase, family 39; n=1;
           Geobacter uraniumreducens Rf4|Rep: Glycosyl transferase,
           family 39 - Geobacter uraniumreducens Rf4
          Length = 414

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 286 KIPLLCTYLFIVYTPIA*KHDSSDWSLRRTGHLPG-TVALRSY 411
           +IP+LC +L  +Y  +    D S WSL   G   G T A +SY
Sbjct: 135 EIPVLCFFLMFLYFMLEYAEDGSRWSLPLAGVALGLTAATKSY 177


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,119,852
Number of Sequences: 1657284
Number of extensions: 11696267
Number of successful extensions: 28400
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28389
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)