Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_D16
         (498 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase pro...    24   3.3  
CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...    24   3.3  
AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase p...    24   3.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   5.8  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.6  

>L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 296 YSAHTYLLFIHQSHENTTPQTGHSVALVIFQELSLFDLTRISQPRENP 439
           Y  H+Y+  I Q H+N  P   ++ + + F  +S+  +T   QP + P
Sbjct: 401 YRWHSYIDDIFQEHKNKLPP--YTRSQLTFDGISITGIT--VQPEDGP 444


>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +1

Query: 292 PLLCTYLFIVYTPIA*KHDSSDWSLRRTGHLPGTVALRSY 411
           PL  TY   +YT +      S+  L   GHLP   A + Y
Sbjct: 102 PLSNTYT--IYTSVLANDSGSELELDADGHLPRAKAQQHY 139


>AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 296 YSAHTYLLFIHQSHENTTPQTGHSVALVIFQELSLFDLTRISQPRENP 439
           Y  H+Y+  I Q H+N  P   ++ + + F  +S+  +T   QP + P
Sbjct: 401 YRWHSYIDDIFQEHKNKLPP--YTRSQLTFDGISITGIT--VQPEDGP 444


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = -3

Query: 367 GVTSLRS--RVFMRLVYKQ*ISMCRVTVFSYDSTLLTRKN 254
           G+TSL +  +VF  ++YK  +  CR  +  Y    + +K+
Sbjct: 619 GITSLCAIAKVFELVIYKNLLHACRSYLSPYQHGFVPKKS 658


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 244 LLYCFHAPSC 215
           L+YCF +PSC
Sbjct: 34  LIYCFVSPSC 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,390
Number of Sequences: 2352
Number of extensions: 11352
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)