Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_D16
         (498 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003581-1|AAO39585.1|  946|Drosophila melanogaster LD17329p pro...    29   2.6  
AE014297-767|AAF54252.3| 1399|Drosophila melanogaster CG31258-PA...    29   2.6  
AY069715-1|AAL39860.1|  786|Drosophila melanogaster LP01394p pro...    29   3.5  
AL109630-3|CAB65872.1|  975|Drosophila melanogaster EG:BACR7A4.1...    29   3.5  
AE014298-123|ABC67162.1|  786|Drosophila melanogaster CG3711-PB,...    29   3.5  
AE014298-122|AAF45563.1|  975|Drosophila melanogaster CG3711-PA,...    29   3.5  
AE014297-4154|AAF56730.2|  445|Drosophila melanogaster CG31058-P...    29   3.5  
BT003319-1|AAO25079.1|  470|Drosophila melanogaster AT27573p pro...    29   4.6  
AY089387-1|AAL90125.1|  426|Drosophila melanogaster AT21186p pro...    29   4.6  
AE014296-1873|AAN11891.1|  471|Drosophila melanogaster CG32081-P...    28   6.1  
M62472-1|AAA62769.1|  679|Drosophila melanogaster recombination ...    28   8.1  
AY118605-1|AAM49974.1|  679|Drosophila melanogaster LP05366p pro...    28   8.1  
AF073994-2|AAC27621.1|  679|Drosophila melanogaster recombinatio...    28   8.1  
AE014134-522|AAF51175.1|  679|Drosophila melanogaster CG3178-PA ...    28   8.1  

>BT003581-1|AAO39585.1|  946|Drosophila melanogaster LD17329p
           protein.
          Length = 946

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/44 (36%), Positives = 28/44 (63%)
 Frame = +1

Query: 361 SLRRTGHLPGTVALRSYSYIAAKGKPQQGALQRCFKDTITLTRS 492
           S+RR+G++PG+  LR ++ I  + +     L   F++T+ LTRS
Sbjct: 121 SMRRSGNVPGSDKLRRHA-IRRRSRSCGRQLLPEFEETVNLTRS 163


>AE014297-767|AAF54252.3| 1399|Drosophila melanogaster CG31258-PA
           protein.
          Length = 1399

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/44 (36%), Positives = 28/44 (63%)
 Frame = +1

Query: 361 SLRRTGHLPGTVALRSYSYIAAKGKPQQGALQRCFKDTITLTRS 492
           S+RR+G++PG+  LR ++ I  + +     L   F++T+ LTRS
Sbjct: 121 SMRRSGNVPGSDKLRRHA-IRRRSRSCGRQLLPEFEETVNLTRS 163


>AY069715-1|AAL39860.1|  786|Drosophila melanogaster LP01394p
           protein.
          Length = 786

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 186 DPGRILQNSPLRIGRRG-GWGRACVSGSGILPPIPIGFNXRGVLVGIS 46
           D G+ + N  +R G +   WGRAC +G+   PP P  ++   V+ G S
Sbjct: 270 DNGKNMLNDLIRFGVKDKSWGRACATGT---PPAP-RYHHSAVVAGSS 313


>AL109630-3|CAB65872.1|  975|Drosophila melanogaster EG:BACR7A4.19
           protein.
          Length = 975

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 186 DPGRILQNSPLRIGRRG-GWGRACVSGSGILPPIPIGFNXRGVLVGIS 46
           D G+ + N  +R G +   WGRAC +G+   PP P  ++   V+ G S
Sbjct: 270 DNGKNMLNDLIRFGVKDKSWGRACATGT---PPAP-RYHHSAVVAGSS 313


>AE014298-123|ABC67162.1|  786|Drosophila melanogaster CG3711-PB,
           isoform B protein.
          Length = 786

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 186 DPGRILQNSPLRIGRRG-GWGRACVSGSGILPPIPIGFNXRGVLVGIS 46
           D G+ + N  +R G +   WGRAC +G+   PP P  ++   V+ G S
Sbjct: 270 DNGKNMLNDLIRFGVKDKSWGRACATGT---PPAP-RYHHSAVVAGSS 313


>AE014298-122|AAF45563.1|  975|Drosophila melanogaster CG3711-PA,
           isoform A protein.
          Length = 975

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 186 DPGRILQNSPLRIGRRG-GWGRACVSGSGILPPIPIGFNXRGVLVGIS 46
           D G+ + N  +R G +   WGRAC +G+   PP P  ++   V+ G S
Sbjct: 270 DNGKNMLNDLIRFGVKDKSWGRACATGT---PPAP-RYHHSAVVAGSS 313


>AE014297-4154|AAF56730.2|  445|Drosophila melanogaster CG31058-PA
           protein.
          Length = 445

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
 Frame = +2

Query: 5   RPHQCGTHPGVKRPEIPTKTPR*----LNPM-GMGGRIPLPDTQALPHPPLR 145
           RP Q    P   RP +    PR       PM GMG R P+P   A   PPLR
Sbjct: 191 RPPQNFVLPPQMRPAVGPPQPRPPFAGARPMVGMGPRPPMPPNMAARPPPLR 242


>BT003319-1|AAO25079.1|  470|Drosophila melanogaster AT27573p
           protein.
          Length = 470

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 120 CVSGSGILPPIPIGFNXRGVLVGI 49
           CV G+G++  IP+ FN  G++ GI
Sbjct: 31  CVVGTGVMA-IPLSFNYAGIITGI 53


>AY089387-1|AAL90125.1|  426|Drosophila melanogaster AT21186p
           protein.
          Length = 426

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 120 CVSGSGILPPIPIGFNXRGVLVGI 49
           CV G+G++  IP+ FN  G++ GI
Sbjct: 31  CVVGTGVMA-IPLSFNYAGIITGI 53


>AE014296-1873|AAN11891.1|  471|Drosophila melanogaster CG32081-PA
           protein.
          Length = 471

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 120 CVSGSGILPPIPIGFNXRGVLVGI 49
           CV G+G++  IP+ FN  G++ GI
Sbjct: 31  CVVGTGVMA-IPLSFNYAGIVTGI 53


>M62472-1|AAA62769.1|  679|Drosophila melanogaster recombination
           repair protein protein.
          Length = 679

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = -3

Query: 91  HPHWV*LXGGFSGYFRALYARVSP 20
           HP+W+ + GG++G   A+Y+++ P
Sbjct: 480 HPYWLCMPGGYAGV--AIYSKIMP 501


>AY118605-1|AAM49974.1|  679|Drosophila melanogaster LP05366p
           protein.
          Length = 679

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = -3

Query: 91  HPHWV*LXGGFSGYFRALYARVSP 20
           HP+W+ + GG++G   A+Y+++ P
Sbjct: 480 HPYWLCMPGGYAGV--AIYSKIMP 501


>AF073994-2|AAC27621.1|  679|Drosophila melanogaster recombination
           repair protein 1 protein.
          Length = 679

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = -3

Query: 91  HPHWV*LXGGFSGYFRALYARVSP 20
           HP+W+ + GG++G   A+Y+++ P
Sbjct: 480 HPYWLCMPGGYAGV--AIYSKIMP 501


>AE014134-522|AAF51175.1|  679|Drosophila melanogaster CG3178-PA
           protein.
          Length = 679

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = -3

Query: 91  HPHWV*LXGGFSGYFRALYARVSP 20
           HP+W+ + GG++G   A+Y+++ P
Sbjct: 480 HPYWLCMPGGYAGV--AIYSKIMP 501


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,556,477
Number of Sequences: 53049
Number of extensions: 533341
Number of successful extensions: 1137
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)