Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_D15
(524 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 205 2e-53
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 205 2e-53
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 205 2e-53
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 66 1e-11
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 31 0.38
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 31 0.38
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 31 0.38
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 31 0.38
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 31 0.38
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 31 0.38
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 31 0.38
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 31 0.38
U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81476-10|CAN86579.1| 224|Caenorhabditis elegans Hypothetical p... 29 1.5
Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical pr... 29 1.5
AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical ... 29 1.5
Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical p... 28 3.6
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 3.6
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 3.6
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 3.6
AF047657-1|AAK18951.1| 328|Caenorhabditis elegans Serpentine re... 28 4.7
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 28 4.7
U97189-7|AAK68257.3| 782|Caenorhabditis elegans Hypothetical pr... 27 6.2
AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical ... 27 8.2
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 205 bits (500), Expect = 2e-53
Identities = 95/128 (74%), Positives = 107/128 (83%)
Frame = +2
Query: 5 EAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIK 184
EA F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +K
Sbjct: 302 EARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLK 361
Query: 185 SGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGKVTKAA 364
SGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V + GKVTK+A
Sbjct: 362 SGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVEKSDGSSGKVTKSA 421
Query: 365 EKATNGKK 388
+KA KK
Sbjct: 422 QKAAPKKK 429
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 205 bits (500), Expect = 2e-53
Identities = 95/128 (74%), Positives = 107/128 (83%)
Frame = +2
Query: 5 EAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIK 184
EA F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +K
Sbjct: 336 EARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLK 395
Query: 185 SGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGKVTKAA 364
SGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V + GKVTK+A
Sbjct: 396 SGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVEKSDGSSGKVTKSA 455
Query: 365 EKATNGKK 388
+KA KK
Sbjct: 456 QKAAPKKK 463
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 205 bits (500), Expect = 2e-53
Identities = 95/128 (74%), Positives = 107/128 (83%)
Frame = +2
Query: 5 EAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIK 184
EA F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +K
Sbjct: 336 EARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLK 395
Query: 185 SGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGKVTKAA 364
SGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V + GKVTK+A
Sbjct: 396 SGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVEKSDGSSGKVTKSA 455
Query: 365 EKATNGKK 388
+KA KK
Sbjct: 456 QKAAPKKK 463
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 66.1 bits (154), Expect = 1e-11
Identities = 36/103 (34%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Frame = +2
Query: 17 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 196
F A+V+VL H I++GY+ VL +A + +D++TG+ + K +K +
Sbjct: 431 FDAEVLVLEHRSIIASGYSCVLHIQSAVEEVTVKGVIATIDKKTGE--KKRAKFVKQDEK 488
Query: 197 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVG-VIKAV 322
I+ L +P +E F+E+P LGRF +RD +T+A+G V+K V
Sbjct: 489 CIMRLESPEPFVLEPFKEYPYLGRFTLRDEGKTIAIGKVLKVV 531
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/102 (22%), Positives = 45/102 (44%)
Frame = +2
Query: 17 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 196
F +++ I G L H+ + C F + +++ G+ + P+ I G +
Sbjct: 487 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 546
Query: 197 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 322
A+V + + +E+F LGR R T+A G+++ V
Sbjct: 547 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 588
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/102 (22%), Positives = 45/102 (44%)
Frame = +2
Query: 17 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 196
F +++ I G L H+ + C F + +++ G+ + P+ I G +
Sbjct: 505 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 564
Query: 197 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 322
A+V + + +E+F LGR R T+A G+++ V
Sbjct: 565 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 606
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 316 GCELQGSRWWQSHQSCRKS--HQWQEVASTLNSSVLYTTAILHSPKGVQKERRATNSFLF 489
GCE++ ++ H +CR S H++ AS +S V L +P +K+R T+ L
Sbjct: 493 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 551
Query: 490 Y 492
Y
Sbjct: 552 Y 552
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 316 GCELQGSRWWQSHQSCRKS--HQWQEVASTLNSSVLYTTAILHSPKGVQKERRATNSFLF 489
GCE++ ++ H +CR S H++ AS +S V L +P +K+R T+ L
Sbjct: 707 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 765
Query: 490 Y 492
Y
Sbjct: 766 Y 766
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 316 GCELQGSRWWQSHQSCRKS--HQWQEVASTLNSSVLYTTAILHSPKGVQKERRATNSFLF 489
GCE++ ++ H +CR S H++ AS +S V L +P +K+R T+ L
Sbjct: 843 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 901
Query: 490 Y 492
Y
Sbjct: 902 Y 902
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 316 GCELQGSRWWQSHQSCRKS--HQWQEVASTLNSSVLYTTAILHSPKGVQKERRATNSFLF 489
GCE++ ++ H +CR S H++ AS +S V L +P +K+R T+ L
Sbjct: 892 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 950
Query: 490 Y 492
Y
Sbjct: 951 Y 951
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 316 GCELQGSRWWQSHQSCRKS--HQWQEVASTLNSSVLYTTAILHSPKGVQKERRATNSFLF 489
GCE++ ++ H +CR S H++ AS +S V L +P +K+R T+ L
Sbjct: 892 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 950
Query: 490 Y 492
Y
Sbjct: 951 Y 951
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 316 GCELQGSRWWQSHQSCRKS--HQWQEVASTLNSSVLYTTAILHSPKGVQKERRATNSFLF 489
GCE++ ++ H +CR S H++ AS +S V L +P +K+R T+ L
Sbjct: 884 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 942
Query: 490 Y 492
Y
Sbjct: 943 Y 943
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 316 GCELQGSRWWQSHQSCRKS--HQWQEVASTLNSSVLYTTAILHSPKGVQKERRATNSFLF 489
GCE++ ++ H +CR S H++ AS +S V L +P +K+R T+ L
Sbjct: 895 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 953
Query: 490 Y 492
Y
Sbjct: 954 Y 954
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 316 GCELQGSRWWQSHQSCRKS--HQWQEVASTLNSSVLYTTAILHSPKGVQKERRATNSFLF 489
GCE++ ++ H +CR S H++ AS +S V L +P +K+R T+ L
Sbjct: 896 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 954
Query: 490 Y 492
Y
Sbjct: 955 Y 955
>U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical
protein C10G11.6 protein.
Length = 425
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 82 GLPHSPHSLQICRNQRESRPSYW*INR 162
GL HSPHS N R S P ++ INR
Sbjct: 47 GLVHSPHSSFTTENLRSSDPMFFDINR 73
>Z81476-10|CAN86579.1| 224|Caenorhabditis elegans Hypothetical
protein C25F9.13 protein.
Length = 224
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 141 VVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHP 260
++L++ T L L + P + W PPS C P+ ++ P
Sbjct: 149 LILISSLITCFLNLKLSIVPSTKWRPPSSCTMYPANSTFP 188
>Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical
protein C25F9.1 protein.
Length = 431
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 141 VVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHP 260
++L++ T L L + P + W PPS C P+ ++ P
Sbjct: 149 LILISSLITCFFNLKLEIVPSTKWRPPSSCTMYPANSTFP 188
>AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical
protein Y71D11A.1 protein.
Length = 506
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 114 LPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWS 239
LPK+ T V + TT+ P +PP +T PP +S
Sbjct: 264 LPKTTVAPTTTTVPRTTTTVPPTTTTVPPTTTTVPPITTTYS 305
>Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical
protein K07A1.9b protein.
Length = 457
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 290 ASCHARRNDRGVGIPGRTPHTGAW 219
+SC +NDRG P R+ +GAW
Sbjct: 15 SSCGYCKNDRGERTPARSAKSGAW 38
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 3.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 80 LDCHTAHIACKFAEIKEKVDRRTGKSTE 163
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 3.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 80 LDCHTAHIACKFAEIKEKVDRRTGKSTE 163
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 3.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 80 LDCHTAHIACKFAEIKEKVDRRTGKSTE 163
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AF047657-1|AAK18951.1| 328|Caenorhabditis elegans Serpentine
receptor, class j protein54 protein.
Length = 328
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 392 LALLTAQFYIQLRYFIHRKVFRRKEGLQTHSFSIFFTMA 508
++L+ A + + L +FI+R + L TH F + T++
Sbjct: 96 ISLVAASYAVLLTHFIYRYLVIHNSSLATHKFHWYLTIS 134
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 334 SRWWQSHQSCRKSHQWQEVASTLNSSVLYTTAILHSPKGVQKERRATN 477
SR+ H S S EV S +SS+ +T L+S K ++ RRA N
Sbjct: 3717 SRFLNMHNSGSDSDSGSEVRSDSSSSLGGSTESLNSSKKGKRARRAMN 3764
>U97189-7|AAK68257.3| 782|Caenorhabditis elegans Hypothetical
protein C48B6.8 protein.
Length = 782
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 325 LQGSRWWQSHQSCRKSHQWQEVASTLNSSVLYTTAILHSPKGVQKER 465
L GS W + QS R +W N + HSPK + K R
Sbjct: 687 LNGSFWANTQQSLRDRLRWAVKTDRGNEMTMIEKLCEHSPKELPKIR 733
>AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical
protein Y55F3AM.9 protein.
Length = 379
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2
Query: 116 AEIKEKVDRRTGKSTEDNPKS 178
AEI + +D+ GKSTE++P++
Sbjct: 27 AEILQSLDKSLGKSTEESPEA 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,523,129
Number of Sequences: 27780
Number of extensions: 315192
Number of successful extensions: 1010
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -