Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_D13
         (534 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          27   0.52 
AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related ...    26   0.91 
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    25   2.1  
AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative odorant-b...    24   3.7  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   4.9  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     23   4.9  
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       23   6.4  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   6.4  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   8.5  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   8.5  
AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein pro...    23   8.5  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   8.5  

>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 26.6 bits (56), Expect = 0.52
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -1

Query: 309 PVL*NNGHTSLPDVQYMINSGSGPGGRLIFRHPSLSASLMVRGILKK 169
           P+L  NGHT++  +  M  SGSG  G  +    S++  + +  ++ K
Sbjct: 23  PIL--NGHTTIQGLIEMSTSGSGSSGLPLLVQRSIARQIQLVDVIGK 67


>AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related 2
           protein protein.
          Length = 257

 Score = 25.8 bits (54), Expect = 0.91
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +2

Query: 101 CGLQHNGLRVK--YGWSDDNVGVDHFFKIPRTISE 199
           C  QH+  R    Y W+  N+ +  F ++  TIS+
Sbjct: 112 CQYQHDSCRNTPVYAWAGQNIALAQFSRMTNTISQ 146


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 104 GLQHNGLRVKYGWSDDNVGVDH 169
           G ++ GL  + G SDD+ GVD+
Sbjct: 294 GTKNGGLLFELGKSDDDCGVDY 315


>AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative
           odorant-binding protein OBPjj16 protein.
          Length = 198

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = +2

Query: 176 KIPRTISEAESEGWRKISRPPGPLPELIMYCTSGRLV--CPLFHKTGFV 316
           KIP+ I  A  E  R  +  PG +P   +  T G  +  C +    GFV
Sbjct: 39  KIPKPIDNAIMEKCRAENPKPGQMPAPGVPRTEGCCIVQCAMMETGGFV 87


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = +2

Query: 191 ISEAESEGWRKISRPPGPLPELIMYCTSGRLVCPLFHKTGFVLGL-QIALPVDNYESPVT 367
           + +A   GWR++ +PP  L  L +Y         L     FVL    ++ P    + PV 
Sbjct: 105 LRQAGQGGWREVQQPP-RLSRLCIYVV---FCSALLSHNAFVLARPNLSAPASGEKVPVG 160

Query: 368 DL 373
            L
Sbjct: 161 QL 162


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 164 DHFFKIPRTISEAESEGWRK 223
           DHF +I   +S  ESE W +
Sbjct: 284 DHFEQIATWLSTLESEAWNQ 303


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 320 GLQIALPVDNYESPVTDLGKKFVKWHAPADD 412
           GL++  P   Y+  V D   K  +   P+DD
Sbjct: 116 GLEVPKPSVRYDKKVMDFAVKLFQKAFPSDD 146


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 226  YLPPSFTLCLANGTRDFEEVVNTHVIIRPTVLYSQSV 116
            Y   S TLC   G    E V+N ++  R T+L  Q +
Sbjct: 991  YYDNSSTLC--TGAIPLENVINGNLTSRKTILSPQPI 1025


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 261 CTVRRAGWCVRCFTRLDS 314
           CTVRRA   + C T + S
Sbjct: 150 CTVRRAKTIIACLTMVGS 167


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +3

Query: 390 NGMLPPTT-GNRPGIIGLPHNIMPPKSL 470
           NG LPP   G RP  + +P   MPP  L
Sbjct: 106 NGPLPPPMMGMRPPPMMVPTMGMPPMGL 133


>AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein
           protein.
          Length = 182

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = -2

Query: 398 HAI*RISSLNQLRVIHSCLLVEQFVILRRIQSCETTDTPACPTYST*LTQEAGLE 234
           H +  I    Q + +   LLV   + L  I S    D  +    ST L+ +AG E
Sbjct: 13  HGVSEIIPQQQKKTMKFLLLVASVLCLVLIVSARPADDTSDQESSTELSDDAGAE 67


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 88  CHGRLWITTQ 117
           C GR WITTQ
Sbjct: 250 CAGRRWITTQ 259


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,894
Number of Sequences: 2352
Number of extensions: 14093
Number of successful extensions: 26
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)