Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_D09
(520 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D57537 Cluster: PREDICTED: similar to CG2926-PA;... 99 5e-20
UniRef50_UPI00015B609E Cluster: PREDICTED: hypothetical protein;... 85 9e-16
UniRef50_Q9VNE0 Cluster: CG2926-PA; n=3; Sophophora|Rep: CG2926-... 62 6e-09
UniRef50_Q16LY1 Cluster: Putative uncharacterized protein; n=2; ... 47 3e-04
UniRef50_Q7QE18 Cluster: ENSANGP00000016830; n=3; Coelomata|Rep:... 40 0.045
UniRef50_UPI000058703D Cluster: PREDICTED: similar to LOC445829 ... 36 0.73
UniRef50_UPI000065EE29 Cluster: Homolog of Homo sapiens "CTD-bin... 35 1.3
UniRef50_A6RYY1 Cluster: Putative uncharacterized protein; n=2; ... 35 1.3
UniRef50_Q6H7B9 Cluster: Putative uncharacterized protein P0415B... 34 1.7
UniRef50_A3B2C8 Cluster: Putative uncharacterized protein; n=1; ... 34 1.7
UniRef50_A7EBC2 Cluster: Putative uncharacterized protein; n=1; ... 34 1.7
UniRef50_UPI0000D9A3A0 Cluster: PREDICTED: hypothetical protein;... 34 2.2
UniRef50_Q4TA67 Cluster: Chromosome undetermined SCAF7434, whole... 34 2.2
UniRef50_Q2GAX9 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_UPI0000E494E8 Cluster: PREDICTED: similar to CTD-bindin... 33 3.0
UniRef50_Q5SN26 Cluster: Putative uncharacterized protein P0671D... 33 3.0
UniRef50_A2YYF7 Cluster: Putative uncharacterized protein; n=1; ... 33 3.0
UniRef50_A6NG32 Cluster: Uncharacterized protein CHMP1A; n=2; Ho... 33 3.0
UniRef50_UPI000069F08E Cluster: UPI000069F08E related cluster; n... 33 3.9
UniRef50_Q4SAE4 Cluster: Chromosome 13 SCAF14688, whole genome s... 33 3.9
UniRef50_Q9DGS3 Cluster: Arg-rich protein; n=8; Alphaherpesvirin... 33 3.9
UniRef50_UPI0000E7F948 Cluster: PREDICTED: hypothetical protein;... 33 5.2
UniRef50_A5B696 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_A6RL45 Cluster: Tyrosyl-tRNA synthetase, mitochondrial;... 33 5.2
UniRef50_Q9P1Y6 Cluster: RING and PHD-finger domain-containing p... 33 5.2
UniRef50_UPI0001556437 Cluster: PREDICTED: similar to up-regulat... 32 6.8
UniRef50_UPI00004D858F Cluster: serine arginine-rich pre-mRNA sp... 32 6.8
UniRef50_A6W7I0 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_A5NRY5 Cluster: Cytochrome c, monohaem; n=5; Alphaprote... 32 6.8
UniRef50_Q95W83 Cluster: Erythrocyte membrane protein 1; n=3; Pl... 32 6.8
UniRef50_Q86MR6 Cluster: Erythrocyte membrane protein 1; n=8; Pl... 32 6.8
UniRef50_Q23915 Cluster: Protein kinase; n=2; Dictyostelium disc... 32 6.8
UniRef50_A3R6V1 Cluster: Erythrocyte membrane protein 1; n=12; P... 32 6.8
UniRef50_Q9H7N4 Cluster: Splicing factor, arginine/serine-rich 1... 32 6.8
UniRef50_P46307 Cluster: Chloroplast 30S ribosomal protein S3; n... 32 6.8
UniRef50_Q4SR57 Cluster: Chromosome 11 SCAF14528, whole genome s... 32 9.0
UniRef50_A2WBU1 Cluster: Putative uncharacterized protein; n=1; ... 32 9.0
UniRef50_Q4QCU2 Cluster: Putative uncharacterized protein; n=2; ... 32 9.0
>UniRef50_UPI0000D57537 Cluster: PREDICTED: similar to CG2926-PA; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to CG2926-PA
- Tribolium castaneum
Length = 1599
Score = 99.1 bits (236), Expect = 5e-20
Identities = 63/131 (48%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Frame = +3
Query: 177 DSPYSPGSSDFGELFSPPGGAR-----------------RDPFDALMDXXXXXXXXXXXX 305
DSPYSPGSSD+ +LF PP ++ FDAL
Sbjct: 1402 DSPYSPGSSDYEDLFEPPVETAPKTVTKTTKNVKSPSKVQNAFDALFGTSPFNKVKKQDS 1461
Query: 306 XXXXXXXXXXXVPVRLDRNKSKTQIGVKIDEDNLKILDDLPSPDVEMQVKSKFLKKLNRQ 485
VP Q+GVKIDEDNLKILDDLP+ VEMQVK KFLKKLNRQ
Sbjct: 1462 KKFSKKAPPAAVPSGGKAAAGTKQVGVKIDEDNLKILDDLPNSAVEMQVKDKFLKKLNRQ 1521
Query: 486 ERVVEEVKLVL 518
ERVVEEVKLVL
Sbjct: 1522 ERVVEEVKLVL 1532
>UniRef50_UPI00015B609E Cluster: PREDICTED: hypothetical protein; n=1;
Nasonia vitripennis|Rep: PREDICTED: hypothetical protein
- Nasonia vitripennis
Length = 3240
Score = 85.0 bits (201), Expect = 9e-16
Identities = 61/136 (44%), Positives = 73/136 (53%), Gaps = 19/136 (13%)
Frame = +3
Query: 168 MEADSPYSPGSSDFGELFSPPGGA------------------RRDPFDALMDXXXXXXXX 293
++ SPYSPGSS LF PP A +RD FDAL D
Sbjct: 3042 VDNSSPYSPGSSLSDGLFDPPSPAFNSSPTMALSTKIRKNQEKRDAFDALFDASPIVHKS 3101
Query: 294 XXXXXXXXXXXXXXXVPVRLDRNK-SKTQIGVKIDEDNLKILDDLPSPDVEMQVKSKFLK 470
P + + K + ++IGV++DE+ L+ILDDLPS VEMQVK KFLK
Sbjct: 3102 SAKGRMKK--------PEKDKKKKGTHSKIGVRMDENQLQILDDLPSSAVEMQVKDKFLK 3153
Query: 471 KLNRQERVVEEVKLVL 518
KLNRQERVVEEVKLVL
Sbjct: 3154 KLNRQERVVEEVKLVL 3169
>UniRef50_Q9VNE0 Cluster: CG2926-PA; n=3; Sophophora|Rep: CG2926-PA -
Drosophila melanogaster (Fruit fly)
Length = 2296
Score = 62.5 bits (145), Expect = 6e-09
Identities = 42/123 (34%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Frame = +3
Query: 168 MEADSPYSPGSSDFGELFSPP---GGARRDPFDALMDXXXXXXXXXXXXXXXXXXXXXXX 338
ME +SPYSPGS+D+ +LF PP +RR A
Sbjct: 2097 MEIESPYSPGSADYEDLFEPPIPLEASRRAKGGATGGKVEIFDNLFGSSSPISNIRMTSR 2156
Query: 339 VPVRLDRNKSKTQIGVKIDED---NLKILDDLPSPDVEMQVKSKFLKKLNRQERVVEEVK 509
+ + ++T+ K N DD+P+ ++Q K + L+KLNRQERVVEEVK
Sbjct: 2157 YNTAVGKKSNRTKADRKSKVKGARNPDFYDDVPNSATDLQNKDRLLRKLNRQERVVEEVK 2216
Query: 510 LVL 518
LVL
Sbjct: 2217 LVL 2219
>UniRef50_Q16LY1 Cluster: Putative uncharacterized protein; n=2;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 206
Score = 46.8 bits (106), Expect = 3e-04
Identities = 17/35 (48%), Positives = 30/35 (85%)
Frame = +3
Query: 405 LKILDDLPSPDVEMQVKSKFLKKLNRQERVVEEVK 509
+++LD++P+ V++Q+K K ++KL RQER++EEVK
Sbjct: 101 MEMLDEMPNSAVDLQIKEKLIQKLQRQERIIEEVK 135
>UniRef50_Q7QE18 Cluster: ENSANGP00000016830; n=3; Coelomata|Rep:
ENSANGP00000016830 - Anopheles gambiae str. PEST
Length = 150
Score = 39.5 bits (88), Expect = 0.045
Identities = 25/57 (43%), Positives = 33/57 (57%)
Frame = +3
Query: 348 RLDRNKSKTQIGVKIDEDNLKILDDLPSPDVEMQVKSKFLKKLNRQERVVEEVKLVL 518
R + K G K ++ D+ PS ++ K K+LKKLNR ERVVEEVKLV+
Sbjct: 12 RSRKGPHKRSKGGKSNQKGDTANDEDPS---KLSDKEKYLKKLNRLERVVEEVKLVI 65
>UniRef50_UPI000058703D Cluster: PREDICTED: similar to LOC445829
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC445829 protein -
Strongylocentrotus purpuratus
Length = 946
Score = 35.5 bits (78), Expect = 0.73
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -1
Query: 343 GTRAAADRPPDRPECPVRPERRAVRSISASKGSRRAP--PGGENSSPKSLDP 194
GTR+A PP RP ++P+R+A + KG + AP PGG + K L P
Sbjct: 481 GTRSAGSTPP-RPS-GLQPKRKAPPRPGSQKGKKMAPKGPGGGGGAAKKLPP 530
>UniRef50_UPI000065EE29 Cluster: Homolog of Homo sapiens "CTD-binding
SR-like protein rA9; n=1; Takifugu rubripes|Rep: Homolog
of Homo sapiens "CTD-binding SR-like protein rA9 -
Takifugu rubripes
Length = 1510
Score = 34.7 bits (76), Expect = 1.3
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 441 EMQVKSKFLKKLNRQERVVEEVKLVL 518
++ K K+LKKL+ QER VEEVKL +
Sbjct: 1426 DLSRKDKYLKKLHMQERAVEEVKLAI 1451
>UniRef50_A6RYY1 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 636
Score = 34.7 bits (76), Expect = 1.3
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -1
Query: 337 RAAADRPPDRPECPVRPERRAVRSISASKGSRRAPPGGENSSPKS 203
R+ + RPP+ CP +V S+ +S RR P G N SP +
Sbjct: 269 RSDSWRPPETWACPAEETASSVASLKSSGSRRRRKPRGRNRSPSN 313
>UniRef50_Q6H7B9 Cluster: Putative uncharacterized protein
P0415B12.13; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0415B12.13 - Oryza sativa subsp. japonica (Rice)
Length = 252
Score = 34.3 bits (75), Expect = 1.7
Identities = 20/52 (38%), Positives = 22/52 (42%)
Frame = -1
Query: 349 RTGTRAAADRPPDRPECPVRPERRAVRSISASKGSRRAPPGGENSSPKSLDP 194
R G AA RP RP P RP +R +A R PP SSP P
Sbjct: 145 RAGRTRAAGRPASRPR-PPRPPASGLRPYNAHSHPRHRPPVSVRSSPARNPP 195
>UniRef50_A3B2C8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 266
Score = 34.3 bits (75), Expect = 1.7
Identities = 22/62 (35%), Positives = 25/62 (40%)
Frame = -1
Query: 379 ICVLLLLRSNRTGTRAAADRPPDRPECPVRPERRAVRSISASKGSRRAPPGGENSSPKSL 200
+ LLL R G R A P D P PVRP RR + A RR P L
Sbjct: 178 VAALLLHLHRRQGRRRPALLPQDEPLLPVRPGRRRHPVVGAHFLDRRRRHRHHGQQPVDL 237
Query: 199 DP 194
+P
Sbjct: 238 EP 239
>UniRef50_A7EBC2 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 698
Score = 34.3 bits (75), Expect = 1.7
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +3
Query: 351 LDRNKSKTQIGVKIDEDNLKILDDLPSPDVEMQVKSKFLKKLNRQERVVEEVK 509
L R KS +I +KI D I + L P E +K K KKLN + ++EE K
Sbjct: 533 LRRGKSNIRI-IKIVPDKEYIAEGLSFPGHEDWIKQKMPKKLNEEGEIIEEEK 584
>UniRef50_UPI0000D9A3A0 Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 275
Score = 33.9 bits (74), Expect = 2.2
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -1
Query: 361 LRSNRTGTRAAADRPPDRPECPVRPERRAVRSISASKGSRRAPPGGENSSPK 206
L ++ G R A + P RPE P P R+V + + RA +SSP+
Sbjct: 51 LPASELGARRAQETPAARPEAPPTPLERSVAQVESPGLGARARASATSSSPR 102
>UniRef50_Q4TA67 Cluster: Chromosome undetermined SCAF7434, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF7434, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 861
Score = 33.9 bits (74), Expect = 2.2
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +3
Query: 435 DVEMQVKSKFLKKLNRQERVVEEVKLVL 518
D E + K+LKKL+ QER VEEVKL +
Sbjct: 772 DNETKDPDKYLKKLHTQERAVEEVKLAI 799
>UniRef50_Q2GAX9 Cluster: Putative uncharacterized protein; n=1;
Novosphingobium aromaticivorans DSM 12444|Rep: Putative
uncharacterized protein - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 258
Score = 33.9 bits (74), Expect = 2.2
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -1
Query: 346 TGTRAAADRPPDRPECPVRPERRAVRSISASKGSR-RAPPGGENSSP 209
TG +A++ P PE PVRPE A+ G R A P G P
Sbjct: 155 TGVKASSPAPVAAPEAPVRPEAATPEVQLATSGQRTAADPAGPRDEP 201
>UniRef50_UPI0000E494E8 Cluster: PREDICTED: similar to CTD-binding
SR-like protein rA9; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to CTD-binding SR-like
protein rA9 - Strongylocentrotus purpuratus
Length = 2000
Score = 33.5 bits (73), Expect = 3.0
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = +3
Query: 417 DDLPSPDVEMQVKS---KFLKKLNRQERVVEEVKLVL 518
DD+ V++ K+ ++LKKL QERVVEEVKL +
Sbjct: 1847 DDIEMSAVDLYNKNSRDRYLKKLYHQERVVEEVKLAI 1883
>UniRef50_Q5SN26 Cluster: Putative uncharacterized protein
P0671D01.25; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0671D01.25 - Oryza sativa subsp. japonica (Rice)
Length = 156
Score = 33.5 bits (73), Expect = 3.0
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -1
Query: 349 RTGTRAAADRPPDRPECPVRPERRAVRSISASKGSRRAPPGGENSSP 209
R TR RPP + R A+ + S ++G+RRA P GE+SSP
Sbjct: 50 RERTRERERRPPSPMSSALHAARLALPTTSVARGARRALP-GEDSSP 95
>UniRef50_A2YYF7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 287
Score = 33.5 bits (73), Expect = 3.0
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 319 PPDRPECPVRPERRAVR-SISASKGSRRAPPG 227
PPD P P PER AV+ ++ A++ RR P G
Sbjct: 129 PPDTPTHPTEPERAAVQVAVGATEARRRRPSG 160
>UniRef50_A6NG32 Cluster: Uncharacterized protein CHMP1A; n=2; Homo
sapiens|Rep: Uncharacterized protein CHMP1A - Homo
sapiens (Human)
Length = 316
Score = 33.5 bits (73), Expect = 3.0
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -1
Query: 325 DRPPDRPECPVRPE--RRAVRSISASKGSRRAPPGGENS 215
DRPP E PVRPE RR +S + S R+PPG + +
Sbjct: 14 DRPPSSREHPVRPEVGRRPRKSPPGAAWSVRSPPGPDTA 52
>UniRef50_UPI000069F08E Cluster: UPI000069F08E related cluster; n=3;
Xenopus tropicalis|Rep: UPI000069F08E UniRef100 entry -
Xenopus tropicalis
Length = 326
Score = 33.1 bits (72), Expect = 3.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 331 AADRPPDRPECPVRPERRAVRSISASKGSRRAPPGGENSSPKS 203
A+ PP RP+ P R S S +G + PPG ++SP++
Sbjct: 178 ASKHPPARPQLPPASPRAPPASFSFPQGILQLPPGHPSASPRA 220
>UniRef50_Q4SAE4 Cluster: Chromosome 13 SCAF14688, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF14688, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1309
Score = 33.1 bits (72), Expect = 3.9
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 447 QVKSKFLKKLNRQERVVEEVKLVL 518
Q S++LKKL+ QER VEEVKL +
Sbjct: 1179 QNSSQYLKKLHMQERAVEEVKLAI 1202
>UniRef50_Q9DGS3 Cluster: Arg-rich protein; n=8;
Alphaherpesvirinae|Rep: Arg-rich protein - Meleagrid
herpesvirus 1 (MeHV-1) (Turkey herpesvirus)
Length = 198
Score = 33.1 bits (72), Expect = 3.9
Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Frame = -1
Query: 349 RTGTRAAADRPPDRPECPVR----PERRAVRSISASKGSRRAPPGGENS 215
RT TR D P RP P PERR + A G R PP G S
Sbjct: 52 RTATRPGQDSAPGRPARPRTDPGSPERRPAGTTCAGTGLERPPPRGARS 100
>UniRef50_UPI0000E7F948 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 581
Score = 32.7 bits (71), Expect = 5.2
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 358 RSNRTGTRAAADRPPDRPECPVRPERRAVRSISASKGSRRAP 233
R R +R A PP RPE P+R RA R++ + R P
Sbjct: 137 RLGRIPSRPARPEPPARPEPPIRTSSRAGRALRGEPTAGRQP 178
>UniRef50_A5B696 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 898
Score = 32.7 bits (71), Expect = 5.2
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +3
Query: 381 GVKIDEDNLKILDDLPSPDVEMQVKSKFLKKLNRQERVV 497
G+++D D +K++ D+P+P E +V+ FL +L R +
Sbjct: 477 GIEVDSDKIKVILDMPAPRTEREVRG-FLGRLQYISRFI 514
>UniRef50_A6RL45 Cluster: Tyrosyl-tRNA synthetase, mitochondrial;
n=1; Botryotinia fuckeliana B05.10|Rep: Tyrosyl-tRNA
synthetase, mitochondrial - Botryotinia fuckeliana
B05.10
Length = 693
Score = 32.7 bits (71), Expect = 5.2
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +3
Query: 351 LDRNKSKTQIGVKIDEDNLKILDDLPSPDVEMQVKSKFLKKLNRQERVVEEVK 509
L R KS +I +KI D I + L P E +K K KK+N + ++EE K
Sbjct: 536 LRRGKSNIRI-IKIVPDEEYISEGLSFPGNEDWIKQKMPKKVNEEGEIIEEEK 587
>UniRef50_Q9P1Y6 Cluster: RING and PHD-finger domain-containing
protein KIAA1542; n=21; Eutheria|Rep: RING and PHD-finger
domain-containing protein KIAA1542 - Homo sapiens (Human)
Length = 1649
Score = 32.7 bits (71), Expect = 5.2
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 426 PSPDVEMQVKSKFLKKLNRQERVVEEVKLVL 518
P E K +++KKL+ QER VEEVKL +
Sbjct: 1548 PRLAAEKTKKEEYMKKLHMQERAVEEVKLAI 1578
>UniRef50_UPI0001556437 Cluster: PREDICTED: similar to up-regulated
gene 4, partial; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to up-regulated gene 4, partial -
Ornithorhynchus anatinus
Length = 1007
Score = 32.3 bits (70), Expect = 6.8
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Frame = -1
Query: 361 LRSNRTGTRAAADRPP-DRPECPVRPERRA---VRSISASKGSRRAPPGGENSSP 209
L TG PP + PE P P RR +R + +G PPGG+ S P
Sbjct: 443 LAERATGGSGGRGPPPGESPELPGGPRRRGAGYMREPAGPRGPGEDPPGGQKSEP 497
>UniRef50_UPI00004D858F Cluster: serine arginine-rich pre-mRNA
splicing factor SR-A1; n=2; Xenopus tropicalis|Rep:
serine arginine-rich pre-mRNA splicing factor SR-A1 -
Xenopus tropicalis
Length = 1130
Score = 32.3 bits (70), Expect = 6.8
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 459 KFLKKLNRQERVVEEVKLVL 518
K+LKKL+ QER VEEVKL +
Sbjct: 1025 KYLKKLHTQERAVEEVKLAI 1044
>UniRef50_A6W7I0 Cluster: Putative uncharacterized protein; n=1;
Kineococcus radiotolerans SRS30216|Rep: Putative
uncharacterized protein - Kineococcus radiotolerans
SRS30216
Length = 638
Score = 32.3 bits (70), Expect = 6.8
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -1
Query: 343 GTRAAADRPPDRPECPV--RPERRAVRSISA 257
G RAAA PP RPE V RP RA R+ +A
Sbjct: 287 GARAAAHPPPHRPEARVTPRPRERAARAATA 317
>UniRef50_A5NRY5 Cluster: Cytochrome c, monohaem; n=5;
Alphaproteobacteria|Rep: Cytochrome c, monohaem -
Methylobacterium sp. 4-46
Length = 620
Score = 32.3 bits (70), Expect = 6.8
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -1
Query: 361 LRSNRTGTRAAADRPPDRPECPVRPERRAVRSISASKGSRRAPPG 227
LR+ G RAA RPP P RP R + +G R PPG
Sbjct: 72 LRARGGGPRAAGRRPP----APRRPRHGRERPLPRPRGGARGPPG 112
>UniRef50_Q95W83 Cluster: Erythrocyte membrane protein 1; n=3;
Plasmodium|Rep: Erythrocyte membrane protein 1 -
Plasmodium falciparum
Length = 2527
Score = 32.3 bits (70), Expect = 6.8
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -1
Query: 319 PPDRPECPVRPERRAVRSISASKGSRRAPP----GGENSSPKSLDP 194
PP +PE P +PE A + ++ APP GE +PK + P
Sbjct: 2351 PPPKPEVPQKPEETAEDTTEDTEEEAAAPPVAPSSGEEEAPKEVVP 2396
>UniRef50_Q86MR6 Cluster: Erythrocyte membrane protein 1; n=8;
Plasmodium falciparum|Rep: Erythrocyte membrane protein 1
- Plasmodium falciparum
Length = 2480
Score = 32.3 bits (70), Expect = 6.8
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -1
Query: 319 PPDRPECPVRPERRAVRSISASKGSRRAPP----GGENSSPKSLDP 194
PP +PE P +PE A + ++ APP GE +PK + P
Sbjct: 2313 PPPKPEVPQKPEETAEDTTEDTEEEAAAPPVAPSSGEEEAPKEVVP 2358
>UniRef50_Q23915 Cluster: Protein kinase; n=2; Dictyostelium
discoideum|Rep: Protein kinase - Dictyostelium
discoideum (Slime mold)
Length = 1094
Score = 32.3 bits (70), Expect = 6.8
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 363 KSKTQIGVKIDEDNLKILDDLPSP-DVEMQVKSKFLKKLNRQERVVEEVKL 512
++K + VK+DE++ K+ + + P VE V+ ++ N+ E +VEEVK+
Sbjct: 683 QTKEEHDVKVDEESTKVDEPVDEPTKVEESVEQVKAEEPNKVEELVEEVKV 733
>UniRef50_A3R6V1 Cluster: Erythrocyte membrane protein 1; n=12;
Plasmodium falciparum|Rep: Erythrocyte membrane protein 1
- Plasmodium falciparum
Length = 3086
Score = 32.3 bits (70), Expect = 6.8
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -1
Query: 319 PPDRPECPVRPERRAVRSISASKGSRRAPP----GGENSSPKSLDP 194
PP +PE P +PE A + ++ APP GE +PK + P
Sbjct: 2551 PPPKPEVPQKPEETAEDTTEDTEEEAAAPPVAPSSGEEEAPKEVVP 2596
>UniRef50_Q9H7N4 Cluster: Splicing factor, arginine/serine-rich 19;
n=8; Eutheria|Rep: Splicing factor, arginine/serine-rich
19 - Homo sapiens (Human)
Length = 1312
Score = 32.3 bits (70), Expect = 6.8
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 459 KFLKKLNRQERVVEEVKLVL 518
K+LKKL+ QER VEEVKL +
Sbjct: 1206 KYLKKLHTQERAVEEVKLAI 1225
>UniRef50_P46307 Cluster: Chloroplast 30S ribosomal protein S3; n=1;
Chlamydomonas eugametos|Rep: Chloroplast 30S ribosomal
protein S3 - Chlamydomonas eugametos
Length = 800
Score = 32.3 bits (70), Expect = 6.8
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +3
Query: 345 VRLDRNKSKTQIGVKIDEDNLKILDDLPSPDVEMQVKSKFLKKLNRQERVVEEVKLVL 518
++++RN QIG++I +N K+ L S +QVK L KL + + + +K+ L
Sbjct: 79 IKIERNIVPYQIGIQIHAENCKL---LKSSIKNLQVKKDILVKLQKTRQYLTNLKIKL 133
>UniRef50_Q4SR57 Cluster: Chromosome 11 SCAF14528, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 11 SCAF14528, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1657
Score = 31.9 bits (69), Expect = 9.0
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1
Query: 367 LLLRSNRTGTRAAADRPPDRPECPVRPE--RRAVRSISASKGS 245
LLLRS R + +D PP+RP P R + R S+ S G+
Sbjct: 381 LLLRSERRVGKLLSDAPPERPHAPARVQLVRANTNSLEVSWGA 423
>UniRef50_A2WBU1 Cluster: Putative uncharacterized protein; n=1;
Burkholderia dolosa AUO158|Rep: Putative uncharacterized
protein - Burkholderia dolosa AUO158
Length = 321
Score = 31.9 bits (69), Expect = 9.0
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 358 RSNRTGTRAAADRPPDRPECPVRPERRAVRSISASKGSRRA--PPGGENSSPKSLDP 194
RS+R G+ A PP P RP RA R+ +AS S RA P E++ L P
Sbjct: 223 RSSRPGSETAQATPPSAPRVAARP-GRAGRTSNASHASTRARVAPPHEHAFDDPLTP 278
>UniRef50_Q4QCU2 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 892
Score = 31.9 bits (69), Expect = 9.0
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -1
Query: 361 LRSNRTGTRAAADRPPDRPECPVRPERRAVRSISASKGSRRAPPG-GENSSP 209
L S+ A D+PP P P RR + ++ ++ S PG E +SP
Sbjct: 608 LMSSHAVAAAKGDKPPSAPHTPTLSHRRIMNAVDTNQHSHAHYPGAAEQTSP 659
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 289,395,127
Number of Sequences: 1657284
Number of extensions: 4426652
Number of successful extensions: 22755
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 21470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22698
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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