Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_D09
         (520 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013849-1|AAY40258.1|  264|Anopheles gambiae CYP325C2 protein.        29   0.071
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   1.5  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   3.5  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   4.7  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   4.7  

>DQ013849-1|AAY40258.1|  264|Anopheles gambiae CYP325C2 protein.
          Length = 264

 Score = 29.5 bits (63), Expect = 0.071
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +3

Query: 408 KILDDLPSPDVEMQVKSKFLKKLNRQERVVEE 503
           +++D  P PD +++V+   LKKL   ERV++E
Sbjct: 100 EVMDVFPDPDQDIEVED--LKKLTYMERVIKE 129


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 263 QRVEGIAARAPRRREQLPEV 204
           QR E +AAR   +RE+ PEV
Sbjct: 287 QRAECVAARRKMQRERCPEV 306


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 165 PMEADSPYSPGSSDFGELFSPPGGAR 242
           P+ A+  Y PGS++  E    PGGAR
Sbjct: 33  PLHAN--YGPGSNNGQEGLKGPGGAR 56


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -1

Query: 154 VGFGIGFIGSDLIGDGFARNSFGA*GRVASGSTIRTGGAAD 32
           +  GIG    D +GD  A +S  +     +GS  +T   +D
Sbjct: 633 IAVGIGSTSVDAVGDAMASSSPASCSPEQNGSMTKTRSYSD 673


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -1

Query: 154 VGFGIGFIGSDLIGDGFARNSFGA*GRVASGSTIRTGGAAD 32
           +  GIG    D +GD  A +S  +     +GS  +T   +D
Sbjct: 633 IAVGIGSTSVDAVGDAMASSSPASCSPEQNGSMTKTRSYSD 673


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 284,753
Number of Sequences: 2352
Number of extensions: 4049
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)